FFCP PHASE1:Hg19::chr17:45056606..45056625,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388394 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32422 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N4K4 | |||
|association_with_transcript=0bp_to_ENST00000322329,NM_203400,uc002ilb.2_5end | |||
|coexpression_cluster_id=C1782 | |||
|description=CAGE_peak_1_at_RPRML_5end | |||
|id=chr17:45056606..45056625,- | |||
|ontology_enrichment_celltype=CL:0002319!1.86e-08!25;CL:0000540!4.55e-08!6;CL:0000031!4.55e-08!6;CL:0000404!4.55e-08!6;CL:0000047!9.84e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.03e-15;6!CL:0000404;1.03e-15;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-16,6;CL:0000031,6.36e-16,6;CL:0000404,6.36e-16,6;CL:0000047,9.53e-16,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.03e-15;6!UBERON:0006601;4.38e-10;82!UBERON:0010122;1.25e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.51e-46!82;UBERON:0005743!3.67e-45!86;UBERON:0000073!1.59e-43!94;UBERON:0001016!1.59e-43!94;UBERON:0000955!1.37e-40!69;UBERON:0006238!1.37e-40!69;UBERON:0002780!6.28e-34!41;UBERON:0001890!6.28e-34!41;UBERON:0006240!6.28e-34!41;UBERON:0001869!7.62e-34!32;UBERON:0001893!3.18e-33!34;UBERON:0003080!8.16e-33!42;UBERON:0002020!9.00e-33!34;UBERON:0003528!9.00e-33!34;UBERON:0001049!1.88e-32!57;UBERON:0005068!1.88e-32!57;UBERON:0006241!1.88e-32!57;UBERON:0007135!1.88e-32!57;UBERON:0002616!2.95e-32!59;UBERON:0002791!5.37e-32!33;UBERON:0002346!2.04e-29!90;UBERON:0003075!3.80e-29!86;UBERON:0007284!3.80e-29!86;UBERON:0002619!3.89e-27!22;UBERON:0000956!5.27e-25!25;UBERON:0000203!5.27e-25!25;UBERON:0001950!9.55e-25!20;UBERON:0003056!8.79e-24!61;UBERON:0000924!1.07e-23!173;UBERON:0006601!1.07e-23!173;UBERON:0007023!1.52e-23!115;UBERON:0004121!3.72e-23!169;UBERON:0000033!4.92e-21!123;UBERON:0000153!6.56e-20!129;UBERON:0007811!6.56e-20!129;UBERON:0002420!4.25e-10!9;UBERON:0007245!4.25e-10!9;UBERON:0010009!4.25e-10!9;UBERON:0010011!4.25e-10!9;UBERON:0000454!4.25e-10!9;UBERON:0000064!2.49e-09!219;UBERON:0000025!3.37e-09!194;UBERON:0000200!3.70e-09!6;UBERON:0002308!3.79e-09!9;UBERON:0000125!3.79e-09!9;UBERON:0001871!6.58e-09!7;UBERON:0001872!8.25e-08!5;UBERON:0000349!8.95e-08!5;UBERON:0009663!1.07e-07!7;UBERON:0002021!1.08e-07!5;UBERON:0000369!5.20e-07!4;UBERON:0002435!5.20e-07!4;UBERON:0000204!5.20e-07!4;UBERON:0010082!5.20e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.46e-63;32!UBERON:0002791;4.15e-59;32!UBERON:0002619;7.42e-59;22!UBERON:0001893;3.75e-57;34!UBERON:0003528;8.04e-54;34!UBERON:0002020;8.04e-54;34!UBERON:0001950;1.52e-53;20!UBERON:0000956;2.52e-51;25!UBERON:0000203;2.52e-51;25!UBERON:0002780;4.66e-45;41!UBERON:0001890;4.66e-45;41!UBERON:0000073;1.79e-29;53!UBERON:0002616;1.79e-29;53!UBERON:0000955;5.23e-25;68!UBERON:0001017;3.25e-24;75!UBERON:0002420;6.08e-21;9!UBERON:0007245;6.08e-21;9!UBERON:0010009;6.08e-21;9!UBERON:0010011;6.08e-21;9!UBERON:0000454;6.08e-21;9!UBERON:0001016;7.68e-19;83!UBERON:0000200;2.56e-18;6!UBERON:0009663;1.12e-15;7!UBERON:0001871;1.86e-15;6!UBERON:0001872;2.65e-15;5!UBERON:0000349;3.56e-15;5!UBERON:0002021;3.89e-15;5!UBERON:0000369;1.34e-13;4!UBERON:0002435;1.34e-13;4!UBERON:0000204;1.34e-13;4!UBERON:0000125;5.16e-12;9!UBERON:0002308;5.16e-12;9!UBERON:0005383;1.17e-10;3!UBERON:0005382;1.17e-10;3!UBERON:0001870;4.94e-10;3!UBERON:0007023;1.45e-09;114!UBERON:0011216;5.29e-08;132!UBERON:0001873;1.25e-07;2!UBERON:0002702;2.66e-07;2!UBERON:0002771;2.87e-07;2!UBERON:0001876;5.01e-07;2!UBERON:0001954;7.14e-07;2!UBERON:0003022;7.14e-07;2!UBERON:0002421;7.14e-07;2!UBERON:0002600;7.14e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.18e-71,32;UBERON:0001893,1.82e-66,34;UBERON:0002791,6.04e-66,32;UBERON:0001017,2.23e-62,81;UBERON:0002780,3.26e-62,41;UBERON:0001890,3.26e-62,41;UBERON:0003080,3.26e-62,41;UBERON:0006240,3.26e-62,41;UBERON:0003528,1.05e-61,34;UBERON:0002020,1.05e-61,34;UBERON:0002619,6.03e-59,22;UBERON:0001016,8.06e-58,89;UBERON:0001950,1.29e-53,20;UBERON:0000073,1.03e-52,53;UBERON:0002616,1.03e-52,53;UBERON:0000956,2.10e-51,25;UBERON:0000203,2.10e-51,25;UBERON:0000955,2.53e-50,68;UBERON:0006238,2.53e-50,68;UBERON:0001049,1.92e-49,56;UBERON:0005068,1.92e-49,56;UBERON:0006241,1.92e-49,56;UBERON:0007135,1.92e-49,56;UBERON:0003056,6.62e-42,61;UBERON:0003075,2.46e-37,82;UBERON:0007284,2.46e-37,82;UBERON:0002346,3.67e-35,86;UBERON:0004121,5.88e-29,171;UBERON:0000924,5.88e-29,171;UBERON:0006601,5.88e-29,171;UBERON:0010371,1.93e-27,104;UBERON:0007023,2.67e-26,114;UBERON:0010314,4.13e-21,132;UBERON:0002420,5.07e-21,9;UBERON:0007245,5.07e-21,9;UBERON:0010009,5.07e-21,9;UBERON:0010011,5.07e-21,9;UBERON:0000454,5.07e-21,9;UBERON:0011216,1.46e-20,223;UBERON:0000200,2.52e-18,6;UBERON:0009663,1.05e-15,7;UBERON:0001871,1.62e-15,6;UBERON:0001872,2.36e-15,5;UBERON:0000349,2.82e-15,5;UBERON:0002021,4.25e-15,5;UBERON:0000369,1.34e-13,4;UBERON:0002435,1.34e-13,4;UBERON:0000204,1.34e-13,4;UBERON:0010082,1.34e-13,4;UBERON:0000125,4.92e-12,9;UBERON:0002308,4.92e-12,9;UBERON:0000025,1.82e-11,192;UBERON:0005383,1.25e-10,3;UBERON:0005382,1.25e-10,3;UBERON:0001870,5.09e-10,3;UBERON:0001873,1.33e-07,2;UBERON:0010122,1.33e-07,2;UBERON:0004111,1.96e-07,240;UBERON:0002702,2.70e-07,2;UBERON:0002771,2.87e-07,2;UBERON:0001876,4.38e-07,2;UBERON:0001954,6.84e-07,2;UBERON:0003022,6.84e-07,2;UBERON:0002421,6.84e-07,2;UBERON:0002600,6.84e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,3.71842562785448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.17881167947941,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.44905874525234,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.795178609928912,0.348581828608555,0.518305275076852,0.756962552626885,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,3.09315525111078,3.68535783735567,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,1.69160867728801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,1.73123055571734,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0.485442086998054,0,1.13654458722565,0,0,0,4.97073823883149,10.4095368143779,0,0,0,0.796991953004279,0,4.03092396566842,0.102268682502155,0,0,0,0,0,0,0,0,13.5706584453331,10.1117226996418,17.9652418201075,0,0,0,0,0,0.236387681767936,0.344743373241465,3.79085997398231,4.5142498682656,15.0576035588353,30.9932847267298,0,2.87506075821184,1.18219047581419,14.4794362121622,0.10893846351899,0.139423744278603,0,0.113942055847001,4.38071418337314,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.269604531922708,0,9.13631338328823,0,0,0,0,0,7.95789180239274,0.126373159256976,2.85614496887536,0.311064574191741,0,0,0.627865836814451,0,0,0,0,0,0.0870592065804026,1.57254001417827,0,0,0,0,0.290967049465258,0.0882561266915003,0.677942222341597,0,0,8.48364665808775,0,0,0,0.19980960958213,0,1.14536596165916,9.95250987599394,0,0.248505071130865,0,0.271808412147228,0.209205692624666,0.305994652908965,0,6.00420288709789,1.64286454670392,0,0,0,1.11712960508902,0.229160424011684,1.43574604915363,0.399358000997982,0,0,0.335917362433631,0,0,0,0,0,0,0,6.36183751847443,4.63091580779357,1.76828463311521,1.65047323916681,2.9080823662043,0,0,8.50493793212345,0,0,0,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0.66116300871345,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,9.2739961325492,15.6488663383125,0,0.332787154610557,0.248385611765534,76.2300978498632,0.124980407962107,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.521988583930423,0.226705925512272,0,0,0.358177682162975,0,0,0.176689145945881,0,0,0,0,0,11.6137086367454,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,3.32525365389494,0,0,0.327628914576042,0.509197589862076,0,0.123935764259002,0.558644917973244,0,4.10081074006517,0,0,0,15.7361601486326,1.41696576325585,11.1743701340006,15.5888436822974,5.29350562065608,11.0651603942749,15.5016619806577,0,0,0.353909170043221,0,0,0,0,0.596748666348824,0,0,0,0,0.163771917510097,0,7.76682223111538,11.7161714792077,14.0547021620805,7.73672884365663,3.82882366312754,0,0.992422356778588,0,0,0,0.672567444437648,0,0,0,0,0,0.0679697329768317,9.73437048730166,0,0,0,38.0219727596725,0,0,0,0,1.57248397188644,0.47404083519818,0.116241425368125,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,4.67878926924211,3.780064728066,0.475680363110274,0,0.549702583727146,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,0,0,0.788857810965923,13.2583405872284,4.79985759374415,0.5290268405154,0,0,0,0,0.327796715891087,2.28057301820587,0.917899467677836,0.26721740526556,0.18378979906969,0,0.378893491091197,0,0.829169439458779,4.55105181792339,0,0,0.0645889098360061,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.286888821570705,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@RPRML | |||
}} |
Revision as of 15:54, 20 January 2014
Short description: | p1@RPRML |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPRML_5end |
Coexpression cluster: | C1782_medulloblastoma_putamen_caudate_brain_nucleus_occipital_medial |
Association with transcript: | 0bp_to_ENST00000322329, NM_203400, uc002ilb.2_5end |
EntrezGene: | RPRML |
HGNC: | 32422 |
UniProt: | Q8N4K4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.36e-16 | 6 |
neuroblast | 6.36e-16 | 6 |
electrically signaling cell | 6.36e-16 | 6 |
neuronal stem cell | 9.53e-16 | 8 |