FFCP PHASE1:Hg19::chr10:128358880..128358891,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=118611|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26563|TSSclassifier=S|UniProt=|association_with_transcript=123bp_to_ENST00000488181_5end|coexpression_cluster_id=C58|description=CAGE_peak_6_at_C10orf90_5end|id=chr10:128358880..128358891,-|ontology_enrichment_celltype=CL:0000148!6.11e-18!10;CL:0000541!6.11e-18!10;CL:0000147!1.75e-12!14;CL:0002567!2.74e-12!3;CL:0000710!2.14e-08!20|ontology_enrichment_celltype_v019=CL:0000148;1.94e-30;10!CL:0000147;1.68e-21;14!CL:0002567;5.94e-20;3!CL:0000710;8.71e-15;20!CL:0000075;1.02e-10;27!CL:0002566;1.61e-07;1!CL:0002077;1.74e-07;34|ontology_enrichment_celltype_v019_2=CL:0000148,1.82e-30,10;CL:0000541,1.82e-30,10;CL:0000147,1.61e-21,14;CL:0002567,5.41e-20,3;CL:0000710,8.46e-15,20;CL:0000075,9.99e-11,27;CL:0002077,2.49e-08,34;CL:0002566,1.72e-07,1|ontology_enrichment_development_v019=UBERON:0006601;8.46e-13;82!UBERON:0006241;5.28e-09;3!UBERON:0003056;5.28e-09;3!UBERON:0003057;5.28e-09;3!UBERON:0006222;1.07e-07;1!UBERON:0005425;1.61e-07;1|ontology_enrichment_disease=DOID:1909!1.15e-08!2|ontology_enrichment_disease_v019=DOID:1909;1.04e-13;2|ontology_enrichment_disease_v019_2=DOID:1909,9.14e-14,2|ontology_enrichment_uberon=UBERON:0001049!3.04e-65!57;UBERON:0005068!3.04e-65!57;UBERON:0006241!3.04e-65!57;UBERON:0007135!3.04e-65!57;UBERON:0002616!5.36e-55!59;UBERON:0005743!1.48e-53!86;UBERON:0001017!1.84e-53!82;UBERON:0000073!1.51e-50!94;UBERON:0001016!1.51e-50!94;UBERON:0003075!1.60e-48!86;UBERON:0007284!1.60e-48!86;UBERON:0000955!3.16e-48!69;UBERON:0006238!3.16e-48!69;UBERON:0002346!5.70e-46!90;UBERON:0002780!1.17e-45!41;UBERON:0001890!1.17e-45!41;UBERON:0006240!1.17e-45!41;UBERON:0007023!1.20e-45!115;UBERON:0003080!1.93e-44!42;UBERON:0001893!2.59e-42!34;UBERON:0002020!4.05e-42!34;UBERON:0003528!4.05e-42!34;UBERON:0002791!1.57e-39!33;UBERON:0001869!1.41e-36!32;UBERON:0003056!2.09e-31!61;UBERON:0004121!2.02e-27!169;UBERON:0000033!4.23e-27!123;UBERON:0000924!1.46e-26!173;UBERON:0006601!1.46e-26!173;UBERON:0002619!1.27e-25!22;UBERON:0000153!1.90e-25!129;UBERON:0007811!1.90e-25!129;UBERON:0001950!2.43e-24!20;UBERON:0002308!2.85e-24!9;UBERON:0000125!2.85e-24!9;UBERON:0000956!2.77e-22!25;UBERON:0000203!2.77e-22!25;UBERON:0003076!2.36e-21!15;UBERON:0003057!2.36e-21!15;UBERON:0002298!4.23e-21!8;UBERON:0004732!4.22e-20!13;UBERON:0002420!1.36e-18!9;UBERON:0007245!1.36e-18!9;UBERON:0010009!1.36e-18!9;UBERON:0010011!1.36e-18!9;UBERON:0000454!1.36e-18!9;UBERON:0009663!5.06e-18!7;UBERON:0004733!3.78e-17!12;UBERON:0002028!3.78e-17!12;UBERON:0007277!3.78e-17!12;UBERON:0000025!2.73e-15!194;UBERON:0000200!4.06e-14!6;UBERON:0006331!1.60e-11!3;UBERON:0000988!2.20e-11!3;UBERON:0001896!3.59e-11!3;UBERON:0005290!3.59e-11!3;UBERON:0010096!3.59e-11!3;UBERON:0004111!1.28e-10!241;UBERON:0002771!1.37e-10!3;UBERON:0001871!2.56e-10!7;UBERON:0000483!7.36e-10!309;UBERON:0000119!1.13e-09!312;UBERON:0002680!2.70e-09!9;UBERON:0001895!2.70e-09!9;UBERON:0010092!2.70e-09!9;UBERON:0005162!1.54e-08!2;UBERON:0000122!1.54e-08!2;UBERON:0001897!1.85e-08!2;UBERON:0000369!2.10e-08!4;UBERON:0002435!2.10e-08!4;UBERON:0000204!2.10e-08!4;UBERON:0010082!2.10e-08!4;UBERON:0001875!2.39e-08!2;UBERON:0006514!2.39e-08!2;UBERON:0000477!2.67e-08!286;UBERON:0000064!3.86e-08!219;UBERON:0002148!4.69e-08!2;UBERON:0009662!4.69e-08!2;UBERON:0000475!1.79e-07!365;UBERON:0002360!2.13e-07!2;UBERON:0000094!2.13e-07!2;UBERON:0007645!2.13e-07!2;UBERON:0000349!8.15e-07!5;UBERON:0001872!8.83e-07!5|ontology_enrichment_uberon_v019=UBERON:0002298;7.39e-25;6!UBERON:0000125;1.55e-23;9!UBERON:0002308;1.55e-23;9!UBERON:0000073;5.87e-23;53!UBERON:0002616;5.87e-23;53!UBERON:0000988;1.44e-18;3!UBERON:0002780;7.06e-18;41!UBERON:0001890;7.06e-18;41!UBERON:0004732;3.34e-16;13!UBERON:0001893;3.36e-15;34!UBERON:0009663;4.16e-14;7!UBERON:0003528;8.86e-14;34!UBERON:0002020;8.86e-14;34!UBERON:0005162;1.56e-13;2!UBERON:0000122;1.56e-13;2!UBERON:0001897;2.48e-13;2!UBERON:0010225;2.48e-13;2!UBERON:0001016;4.14e-13;83!UBERON:0001875;4.60e-13;2!UBERON:0006514;4.60e-13;2!UBERON:0002148;8.98e-13;2!UBERON:0006331;8.98e-13;2!UBERON:0009662;8.98e-13;2!UBERON:0004733;2.34e-12;12!UBERON:0002028;2.34e-12;12!UBERON:0000955;3.67e-12;68!UBERON:0002791;1.66e-11;32!UBERON:0001017;1.75e-11;75!UBERON:0001869;2.26e-11;32!UBERON:0002420;5.25e-11;9!UBERON:0007245;5.25e-11;9!UBERON:0010009;5.25e-11;9!UBERON:0010011;5.25e-11;9!UBERON:0000454;5.25e-11;9!UBERON:0000200;2.06e-09;6!UBERON:0001896;5.28e-09;3!UBERON:0002240;5.28e-09;3!UBERON:0005174;5.28e-09;3!UBERON:0005290;5.28e-09;3!UBERON:0001137;5.28e-09;3!UBERON:0001894;1.47e-08;7!UBERON:0007023;1.71e-08;114!UBERON:0002336;1.07e-07;1!UBERON:0002038;1.07e-07;1!UBERON:0011215;1.07e-07;1!UBERON:0001018;1.07e-07;1!UBERON:0009661;1.07e-07;1!UBERON:0002950;1.07e-07;1!UBERON:0002473;1.07e-07;1!UBERON:0005340;1.07e-07;1!UBERON:0003544;1.07e-07;1!UBERON:0005970;1.07e-07;1!UBERON:0002316;1.07e-07;1!UBERON:0001020;1.07e-07;1!UBERON:0001891;1.07e-07;1!UBERON:0002437;1.07e-07;1!UBE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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=118611 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26563 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=123bp_to_ENST00000488181_5end | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_6_at_C10orf90_5end | |||
|id=chr10:128358880..128358891,- | |||
|ontology_enrichment_celltype=CL:0000148!6.11e-18!10;CL:0000541!6.11e-18!10;CL:0000147!1.75e-12!14;CL:0002567!2.74e-12!3;CL:0000710!2.14e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.94e-30;10!CL:0000147;1.68e-21;14!CL:0002567;5.94e-20;3!CL:0000710;8.71e-15;20!CL:0000075;1.02e-10;27!CL:0002566;1.61e-07;1!CL:0002077;1.74e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.82e-30,10;CL:0000541,1.82e-30,10;CL:0000147,1.61e-21,14;CL:0002567,5.41e-20,3;CL:0000710,8.46e-15,20;CL:0000075,9.99e-11,27;CL:0002077,2.49e-08,34;CL:0002566,1.72e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.46e-13;82!UBERON:0006241;5.28e-09;3!UBERON:0003056;5.28e-09;3!UBERON:0003057;5.28e-09;3!UBERON:0006222;1.07e-07;1!UBERON:0005425;1.61e-07;1 | |||
|ontology_enrichment_disease=DOID:1909!1.15e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.04e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.14e-14,2 | |||
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|short_description=p6@C10orf90 | |||
}} |
Revision as of 12:18, 10 September 2013
Short description: | p6@C10orf90 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_C10orf90_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 123bp_to_ENST00000488181_5end |
EntrezGene: | C10orf90 |
HGNC: | 26563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.82e-30 | 10 |
melanoblast | 1.82e-30 | 10 |
pigment cell | 1.61e-21 | 14 |
light melanocyte | 5.41e-20 | 3 |
neurecto-epithelial cell | 8.46e-15 | 20 |
columnar/cuboidal epithelial cell | 9.99e-11 | 27 |
ecto-epithelial cell | 2.49e-08 | 34 |
dark melanocyte | 1.72e-07 | 1 |
Ontology term | p-value | n |
---|
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.