FFCP PHASE1:Hg19::chr13:37494498..37494511,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4093 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6774 | |||
|TSSclassifier=strong | |||
|UniProt=O15198 | |||
|association_with_transcript=-89bp_to_ENST00000379826,NM_001127217,NM_005905,uc001uvw.2,uc001uvx.2_5end | |||
|description=CAGE_peak_6_at_SMAD9_5end | |||
|id=chr13:37494498..37494511,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.30e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.62e-35!115;UBERON:0000073!1.14e-29!94;UBERON:0001016!1.14e-29!94;UBERON:0001017!4.32e-27!82;UBERON:0005743!7.92e-27!86;UBERON:0001049!2.24e-26!57;UBERON:0005068!2.24e-26!57;UBERON:0006241!2.24e-26!57;UBERON:0007135!2.24e-26!57;UBERON:0000955!1.13e-23!69;UBERON:0006238!1.13e-23!69;UBERON:0002346!5.74e-21!90;UBERON:0002616!2.48e-20!59;UBERON:0003075!3.43e-19!86;UBERON:0007284!3.43e-19!86;UBERON:0000924!1.71e-18!173;UBERON:0006601!1.71e-18!173;UBERON:0002780!1.14e-17!41;UBERON:0001890!1.14e-17!41;UBERON:0006240!1.14e-17!41;UBERON:0004121!5.33e-17!169;UBERON:0003080!6.76e-17!42;UBERON:0001893!5.12e-15!34;UBERON:0002020!5.15e-15!34;UBERON:0003528!5.15e-15!34;UBERON:0002791!1.79e-14!33;UBERON:0000033!2.02e-14!123;UBERON:0000153!2.59e-14!129;UBERON:0007811!2.59e-14!129;UBERON:0001869!1.83e-13!32;UBERON:0004111!5.76e-13!241;UBERON:0000475!8.96e-12!365;UBERON:0000025!2.57e-11!194;UBERON:0000477!3.02e-11!286;UBERON:0003076!4.70e-11!15;UBERON:0003057!4.70e-11!15;UBERON:0000468!5.79e-11!659;UBERON:0003056!9.21e-11!61;UBERON:0000483!2.48e-10!309;UBERON:0002619!3.27e-10!22;UBERON:0000119!7.23e-10!312;UBERON:0004732!1.77e-09!13;UBERON:0000956!3.16e-09!25;UBERON:0000203!3.16e-09!25;UBERON:0000922!4.67e-09!612;UBERON:0004733!9.15e-09!12;UBERON:0002028!9.15e-09!12;UBERON:0007277!9.15e-09!12;UBERON:0001950!1.11e-08!20;UBERON:0000467!1.38e-08!625;UBERON:0000480!1.82e-08!626;UBERON:0000481!1.88e-08!347;UBERON:0002050!2.10e-08!605;UBERON:0005423!2.10e-08!605;UBERON:0000923!4.32e-08!604;UBERON:0005291!4.32e-08!604;UBERON:0006598!4.32e-08!604;UBERON:0002532!4.32e-08!604;UBERON:0002308!7.56e-08!9;UBERON:0000125!7.56e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.19e-19;53!UBERON:0002616;2.19e-19;53!UBERON:0003528;2.27e-19;34!UBERON:0002020;2.27e-19;34!UBERON:0002791;7.13e-19;32!UBERON:0002780;1.66e-18;41!UBERON:0001890;1.66e-18;41!UBERON:0001893;2.73e-18;34!UBERON:0001869;7.36e-17;32!UBERON:0002619;4.91e-16;22!UBERON:0001017;4.37e-15;75!UBERON:0002298;9.18e-15;6!UBERON:0001016;1.91e-14;83!UBERON:0004732;4.89e-14;13!UBERON:0007023;7.12e-14;114!UBERON:0000956;8.16e-14;25!UBERON:0000203;8.16e-14;25!UBERON:0000955;1.27e-13;68!UBERON:0000125;3.41e-13;9!UBERON:0002308;3.41e-13;9!UBERON:0001950;2.51e-12;20!UBERON:0004733;3.65e-12;12!UBERON:0002028;3.65e-12;12!UBERON:0002420;7.27e-10;9!UBERON:0007245;7.27e-10;9!UBERON:0010009;7.27e-10;9!UBERON:0010011;7.27e-10;9!UBERON:0000454;7.27e-10;9!UBERON:0009663;3.17e-09;7!UBERON:0001896;1.96e-08;3!UBERON:0005290;1.96e-08;3!UBERON:0000988;5.18e-08;3!UBERON:0011216;1.50e-07;132!UBERON:0001954;9.39e-07;2!UBERON:0003022;9.39e-07;2!UBERON:0002421;9.39e-07;2!UBERON:0002600;9.39e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.51e-42,114;UBERON:0001016,6.47e-39,89;UBERON:0001049,1.27e-38,56;UBERON:0005068,1.27e-38,56;UBERON:0006241,1.27e-38,56;UBERON:0007135,1.27e-38,56;UBERON:0001017,1.72e-37,81;UBERON:0000073,2.11e-35,53;UBERON:0002616,2.11e-35,53;UBERON:0000955,6.20e-34,68;UBERON:0006238,6.20e-34,68;UBERON:0002346,4.07e-31,86;UBERON:0003075,2.58e-29,82;UBERON:0007284,2.58e-29,82;UBERON:0002780,1.51e-24,41;UBERON:0001890,1.51e-24,41;UBERON:0003080,1.51e-24,41;UBERON:0006240,1.51e-24,41;UBERON:0004121,3.68e-24,171;UBERON:0000924,3.68e-24,171;UBERON:0006601,3.68e-24,171;UBERON:0003528,3.88e-24,34;UBERON:0002020,3.88e-24,34;UBERON:0001893,6.36e-22,34;UBERON:0010371,4.16e-21,104;UBERON:0002791,9.31e-21,32;UBERON:0010314,1.53e-20,132;UBERON:0011216,9.06e-20,223;UBERON:0001869,3.15e-18,32;UBERON:0003056,6.03e-18,61;UBERON:0002619,9.32e-16,22;UBERON:0003076,1.61e-15,15;UBERON:0003057,1.61e-15,15;UBERON:0002298,9.17e-15,6;UBERON:0004732,3.21e-14,13;UBERON:0000956,1.42e-13,25;UBERON:0000203,1.42e-13,25;UBERON:0000125,1.87e-13,9;UBERON:0002308,1.87e-13,9;UBERON:0004733,2.46e-12,12;UBERON:0002028,2.46e-12,12;UBERON:0007277,2.46e-12,12;UBERON:0001950,4.83e-12,20;UBERON:0004111,1.77e-11,240;UBERON:0002420,2.73e-10,9;UBERON:0007245,2.73e-10,9;UBERON:0010009,2.73e-10,9;UBERON:0010011,2.73e-10,9;UBERON:0000454,2.73e-10,9;UBERON:0009663,1.74e-09,7;UBERON:0000025,2.40e-09,192;UBERON:0001896,1.06e-08,3;UBERON:0005290,1.06e-08,3;UBERON:0010096,1.06e-08,3;UBERON:0000922,3.63e-08,592;UBERON:0000988,9.27e-08,3;UBERON:0002050,1.28e-07,564;UBERON:0005423,1.79e-07,581;UBERON:0000923,2.90e-07,560;UBERON:0010316,2.90e-07,560;UBERON:0005291,2.90e-07,560;UBERON:0006598,2.90e-07,560;UBERON:0010317,2.90e-07,560;UBERON:0002532,2.90e-07,560;UBERON:0001954,7.85e-07,2;UBERON:0003022,7.85e-07,2;UBERON:0002421,7.85e-07,2;UBERON:0002600,7.85e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.986680828671798,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0,0,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0.50133791063589,0.869079113764942,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0.760272105718513,0.732186172644509,0.367663080345869,0,0.625098097988558,0.44905874525234,0.563057402416611,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0,0.560677600142307,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0.468642863667593,0,0,0.448346041655403,0.352303495931295,0.485618833104395,0.280901613404497,0,0,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0.640672166455702,0.423863802319124,0.300091096084402,0.515262646192195,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.644349290496095,0.484938170456436,0,0.503760491138201,0,0,0,0,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,1.01056513432752,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.129271715757778,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0.301439377059586,0,0.599837947092342,0,0,0,0,1.14861935834114,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,1.30139853857622,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,1.2269149171914,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.561320188866147,0.512556597022804,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0.492762936082855,0,0.581051892299796,0,0,0,0.114814448164607,0,0.786746489756545,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.54941678891006,0.742585499285292,0,0,0,0.096670718292122,0.308097234229289,0,0.137836572484531,0.107420244868274,0.580066775656914,0.0852266274161009,0.356128142586949,0,0,0,0,0.929691098594572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.282810863907425,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.286822704408103,0.491245205065606,0,0,1.26664581178598,0.658589785919804,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.121360521749513,0,0,0,0,0,0,1.96937182974718,0.445234820091624,0,0.63337622438398,1.9924798825107,0,0.251932747854276,0.102268682502155,0,0,0,0,0,1.87422470710174,0,0,1.93866549219044,1.66982576691332,3.99227596002388,0,0,0,0.1137934482855,0,0.236387681767936,0.689486746482929,0,1.56262495439963,1.77148277162768,0.964771509003264,1.52581736317083,1.76926815889959,0.591095237907095,0.219385397153973,0,0,0.615602068030377,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,0,0,0.123563938946503,0,3.37005664903385,2.40773294189637,2.81117334870407,0.182454789215666,0.19566461893209,0,1.97292201424695,0,1.53036380815245,1.32691817219825,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.484945082442097,0.0882561266915003,1.80784592624426,0.411125773940253,0,1.39283751102933,0,0,1.06726497369676,0.19980960958213,0,0.458146384663663,0,0,0.372757606696298,0,0,0.313808538937,0.203996435272644,0.288950589901519,2.40168115483916,1.9166753044879,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.470284307407084,0,0,0.157566364614447,0.494495150286999,0.404421263125109,0,0,2.38568906942791,2.99647493445466,0,0,0,0,0,1.03274246318642,0,0.157611414598396,0.734364233889974,0.844802692155252,0,0,1.42939065274673,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0,1.32506888912221,1.55139547633861,1.19009341568421,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0.121792598380896,0,0,0.2506898940227,0,0,0,0.886068179966986,1.34228891392159,1.001527445652,1.72022758707021,2.66229723688445,1.42821726765182,1.10678907948985,0.124980407962107,0,0.570930667089935,0.235265819698172,0,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0,0.147855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| |||
|short_description=p6@SMAD9 | |||
}} |
Revision as of 17:21, 11 January 2014
Short description: | p6@SMAD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SMAD9_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_ENST00000379826, NM_001127217, NM_005905, uc001uvw.2, uc001uvx.2_5end |
EntrezGene: | SMAD9 |
HGNC: | 6774 |
UniProt: | O15198 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data