FFCP PHASE1:Hg19::chr1:110693203..110693231,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:110693203..110693231,+ to FFCP PHASE1:Hg19::chr1:110693203..110693231,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388662 | |EntrezGene=388662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31399 | |HGNC=31399 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1V8 | |UniProt=Q9H1V8 | ||
|association_with_transcript=71bp_to_ENST00000450985,NM_001010898,uc009wfq.2_5end | |||
|cluster_id=chr1:110693203..110693231,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SLC6A17_5end | |||
|id=chr1:110693203..110693231,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.75e-19;82!UBERON:0006215;1.01e-10;3!UBERON:0010122;6.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-56!57;UBERON:0005068!1.70e-56!57;UBERON:0006241!1.70e-56!57;UBERON:0007135!1.70e-56!57;UBERON:0002616!3.14e-49!59;UBERON:0000955!5.36e-48!69;UBERON:0006238!5.36e-48!69;UBERON:0002780!2.56e-47!41;UBERON:0001890!2.56e-47!41;UBERON:0006240!2.56e-47!41;UBERON:0003080!6.71e-46!42;UBERON:0001017!2.34e-45!82;UBERON:0005743!2.50e-44!86;UBERON:0000073!9.05e-42!94;UBERON:0001016!9.05e-42!94;UBERON:0001893!1.46e-40!34;UBERON:0003075!1.63e-40!86;UBERON:0007284!1.63e-40!86;UBERON:0002020!1.85e-40!34;UBERON:0003528!1.85e-40!34;UBERON:0002346!1.86e-39!90;UBERON:0002791!6.24e-39!33;UBERON:0001869!3.76e-38!32;UBERON:0007023!9.13e-37!115;UBERON:0003056!4.41e-33!61;UBERON:0002619!7.13e-33!22;UBERON:0001950!5.50e-30!20;UBERON:0000956!3.74e-28!25;UBERON:0000203!3.74e-28!25;UBERON:0000033!1.78e-25!123;UBERON:0000153!1.70e-23!129;UBERON:0007811!1.70e-23!129;UBERON:0004121!8.63e-19!169;UBERON:0000924!9.94e-19!173;UBERON:0006601!9.94e-19!173;UBERON:0000025!4.04e-15!194;UBERON:0002420!8.31e-14!9;UBERON:0007245!8.31e-14!9;UBERON:0010009!8.31e-14!9;UBERON:0010011!8.31e-14!9;UBERON:0000454!8.31e-14!9;UBERON:0002308!9.54e-14!9;UBERON:0000125!9.54e-14!9;UBERON:0003076!1.25e-11!15;UBERON:0003057!1.25e-11!15;UBERON:0004732!1.40e-11!13;UBERON:0000475!2.23e-11!365;UBERON:0009663!5.41e-11!7;UBERON:0000200!5.63e-11!6;UBERON:0004111!6.34e-11!241;UBERON:0004733!2.23e-10!12;UBERON:0002028!2.23e-10!12;UBERON:0007277!2.23e-10!12;UBERON:0001871!3.74e-10!7;UBERON:0002298!1.26e-09!8;UBERON:0000119!2.42e-09!312;UBERON:0002021!2.55e-09!5;UBERON:0001872!3.55e-09!5;UBERON:0000483!3.75e-09!309;UBERON:0000349!7.59e-09!5;UBERON:0000064!3.23e-08!219;UBERON:0001894!4.63e-08!7;UBERON:0006222!4.63e-08!7;UBERON:0000477!1.54e-07!286;UBERON:0000369!2.99e-07!4;UBERON:0002435!2.99e-07!4;UBERON:0000204!2.99e-07!4;UBERON:0010082!2.99e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.00e-69;32!UBERON:0001893;2.28e-67;34!UBERON:0003528;1.97e-66;34!UBERON:0002020;1.97e-66;34!UBERON:0002619;1.11e-65;22!UBERON:0002791;1.73e-64;32!UBERON:0001950;9.32e-60;20!UBERON:0002780;1.48e-58;41!UBERON:0001890;1.48e-58;41!UBERON:0000073;6.35e-58;53!UBERON:0002616;6.35e-58;53!UBERON:0000956;2.15e-57;25!UBERON:0000203;2.15e-57;25!UBERON:0000955;6.26e-40;68!UBERON:0001017;4.73e-35;75!UBERON:0001016;7.95e-28;83!UBERON:0004732;6.04e-23;13!UBERON:0002420;3.73e-21;9!UBERON:0007245;3.73e-21;9!UBERON:0010009;3.73e-21;9!UBERON:0010011;3.73e-21;9!UBERON:0000454;3.73e-21;9!UBERON:0000125;4.29e-21;9!UBERON:0002308;4.29e-21;9!UBERON:0000200;1.25e-20;6!UBERON:0004733;1.90e-20;12!UBERON:0002028;1.90e-20;12!UBERON:0002298;7.48e-19;6!UBERON:0002021;4.40e-17;5!UBERON:0001872;5.11e-17;5!UBERON:0001871;1.81e-16;6!UBERON:0000349;3.18e-16;5!UBERON:0009663;1.27e-15;7!UBERON:0007023;1.85e-15;114!UBERON:0000369;6.10e-13;4!UBERON:0002435;6.10e-13;4!UBERON:0000204;6.10e-13;4!UBERON:0002680;8.59e-13;9!UBERON:0001895;8.59e-13;9!UBERON:0001870;3.48e-11;3!UBERON:0000988;1.53e-10;3!UBERON:0011216;2.53e-10;132!UBERON:0001896;4.94e-10;3!UBERON:0005290;4.94e-10;3!UBERON:0005383;7.45e-10;3!UBERON:0005382;7.45e-10;3!UBERON:0002702;6.90e-08;2!UBERON:0010314;7.40e-08;132!UBERON:0002771;8.88e-08;2!UBERON:0001954;1.78e-07;2!UBERON:0003022;1.78e-07;2!UBERON:0002421;1.78e-07;2!UBERON:0002600;1.78e-07;2!UBERON:0001894;2.05e-07;7!UBERON:0001876;2.46e-07;2!UBERON:0002148;2.89e-07;2!UBERON:0006331;2.89e-07;2!UBERON:0009662;2.89e-07;2!UBERON:0001875;4.38e-07;2!UBERON:0006514;4.38e-07;2!UBERON:0000007;6.58e-07;2!UBERON:0001873;6.58e-07;2!UBERON:0005162;6.58e-07;2!UBERON:0000122;6.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.84e-103,53;UBERON:0002616,5.84e-103,53;UBERON:0001049,5.69e-97,56;UBERON:0005068,5.69e-97,56;UBERON:0006241,5.69e-97,56;UBERON:0007135,5.69e-97,56;UBERON:0000955,8.87e-90,68;UBERON:0006238,8.87e-90,68;UBERON:0002780,1.57e-82,41;UBERON:0001890,1.57e-82,41;UBERON:0003080,1.57e-82,41;UBERON:0006240,1.57e-82,41;UBERON:0001893,7.59e-78,34;UBERON:0001869,1.00e-77,32;UBERON:0001017,1.14e-77,81;UBERON:0003528,1.23e-77,34;UBERON:0002020,1.23e-77,34;UBERON:0001016,4.67e-72,89;UBERON:0002791,6.51e-72,32;UBERON:0003075,1.61e-69,82;UBERON:0007284,1.61e-69,82;UBERON:0002346,8.21e-66,86;UBERON:0002619,1.47e-65,22;UBERON:0001950,1.12e-59,20;UBERON:0003056,1.35e-59,61;UBERON:0000956,2.75e-57,25;UBERON:0000203,2.75e-57,25;UBERON:0010371,1.27e-52,104;UBERON:0007023,2.18e-48,114;UBERON:0010314,2.27e-41,132;UBERON:0004121,2.84e-34,171;UBERON:0000924,2.84e-34,171;UBERON:0006601,2.84e-34,171;UBERON:0011216,1.16e-27,223;UBERON:0000025,2.10e-26,192;UBERON:0004732,5.56e-23,13;UBERON:0002420,2.50e-21,9;UBERON:0007245,2.50e-21,9;UBERON:0010009,2.50e-21,9;UBERON:0010011,2.50e-21,9;UBERON:0000454,2.50e-21,9;UBERON:0000125,3.21e-21,9;UBERON:0002308,3.21e-21,9;UBERON:0000200,1.51e-20,6;UBERON:0004733,1.58e-20,12;UBERON:0002028,1.58e-20,12;UBERON:0007277,1.58e-20,12;UBERON:0002298,6.29e-19,6;UBERON:0004111,6.69e-19,240;UBERON:0002021,3.33e-17,5;UBERON:0001872,6.45e-17,5;UBERON:0001871,2.05e-16,6;UBERON:0000349,2.98e-16,5;UBERON:0003076,4.51e-16,15;UBERON:0003057,4.51e-16,15;UBERON:0009663,9.61e-16,7;UBERON:0000483,4.25e-14,306;UBERON:0000119,7.49e-14,309;UBERON:0000369,4.81e-13,4;UBERON:0002435,4.81e-13,4;UBERON:0000204,4.81e-13,4;UBERON:0010082,4.81e-13,4;UBERON:0002680,8.16e-13,9;UBERON:0001895,8.16e-13,9;UBERON:0010092,8.16e-13,9;UBERON:0001870,3.80e-11,3;UBERON:0000988,1.53e-10,3;UBERON:0001896,4.16e-10,3;UBERON:0005290,4.16e-10,3;UBERON:0010096,4.16e-10,3;UBERON:0005383,6.08e-10,3;UBERON:0005382,6.08e-10,3;UBERON:0002702,7.51e-08,2;UBERON:0002771,9.50e-08,2;UBERON:0001894,1.77e-07,7;UBERON:0006222,1.77e-07,7;UBERON:0001954,1.96e-07,2;UBERON:0003022,1.96e-07,2;UBERON:0002421,1.96e-07,2;UBERON:0002600,1.96e-07,2;UBERON:0001876,2.16e-07,2;UBERON:0002148,2.89e-07,2;UBERON:0006331,2.89e-07,2;UBERON:0009662,2.89e-07,2;UBERON:0001875,3.98e-07,2;UBERON:0006514,3.98e-07,2;UBERON:0000007,4.82e-07,2;UBERON:0001873,5.13e-07,2;UBERON:0010122,5.13e-07,2;UBERON:0005162,8.98e-07,2;UBERON:0000122,8.98e-07,2 | |||
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| ||
|short_description=p3@SLC6A17 | |||
}} | }} |
Latest revision as of 00:15, 16 September 2015
Short description: | p3@SLC6A17 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC6A17_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 71bp_to_ENST00000450985, NM_001010898, uc009wfq.2_5end |
EntrezGene: | SLC6A17 |
HGNC: | 31399 |
UniProt: | Q9H1V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data