FFCP PHASE1:Hg19::chr1:226923935..226923978,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:226923935..226923978,- to FFCP PHASE1:Hg19::chr1:226923935..226923978,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3707 | |EntrezGene=3707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6179 | |HGNC=6179 | ||
|TSSclassifier=strong | |||
|UniProt=Q2TU82,B2R9J0 | |UniProt=Q2TU82,B2R9J0 | ||
|association_with_transcript=0bp_to_AK289700,AK313801_5end | |||
|cluster_id=chr1:226923935..226923978,- | |||
|coexpression_cluster_id=C3945 | |||
|description=CAGE_peak_4_at_ITPKB_5end | |||
|id=chr1:226923935..226923978,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.76e-16;82!UBERON:0010122;2.85e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.64e-78!115;UBERON:0001049!1.54e-48!57;UBERON:0005068!1.54e-48!57;UBERON:0006241!1.54e-48!57;UBERON:0007135!1.54e-48!57;UBERON:0002616!1.92e-41!59;UBERON:0003075!1.29e-40!86;UBERON:0007284!1.29e-40!86;UBERON:0002346!7.42e-38!90;UBERON:0005743!1.53e-37!86;UBERON:0000955!2.37e-37!69;UBERON:0006238!2.37e-37!69;UBERON:0001017!9.70e-37!82;UBERON:0000073!3.32e-35!94;UBERON:0001016!3.32e-35!94;UBERON:0003080!3.41e-35!42;UBERON:0002780!3.09e-34!41;UBERON:0001890!3.09e-34!41;UBERON:0006240!3.09e-34!41;UBERON:0002020!4.24e-29!34;UBERON:0003528!4.24e-29!34;UBERON:0001893!5.43e-29!34;UBERON:0003056!8.07e-29!61;UBERON:0002791!7.62e-28!33;UBERON:0000153!5.58e-27!129;UBERON:0007811!5.58e-27!129;UBERON:0001869!2.12e-26!32;UBERON:0000033!2.88e-25!123;UBERON:0002619!1.13e-19!22;UBERON:0004121!4.57e-19!169;UBERON:0000956!3.13e-18!25;UBERON:0000203!3.13e-18!25;UBERON:0000924!3.97e-18!173;UBERON:0006601!3.97e-18!173;UBERON:0001950!2.94e-17!20;UBERON:0003076!4.52e-14!15;UBERON:0003057!4.52e-14!15;UBERON:0002308!5.85e-13!9;UBERON:0000125!5.85e-13!9;UBERON:0004732!6.30e-12!13;UBERON:0002298!7.41e-12!8;UBERON:0000025!8.47e-11!194;UBERON:0004733!1.09e-10!12;UBERON:0002028!1.09e-10!12;UBERON:0007277!1.09e-10!12;UBERON:0009663!2.36e-10!7;UBERON:0002420!4.85e-10!9;UBERON:0007245!4.85e-10!9;UBERON:0010009!4.85e-10!9;UBERON:0010011!4.85e-10!9;UBERON:0000454!4.85e-10!9;UBERON:0004111!1.02e-08!241;UBERON:0000200!1.84e-08!6;UBERON:0000477!4.31e-08!286;UBERON:0002680!6.04e-07!9;UBERON:0001895!6.04e-07!9;UBERON:0010092!6.04e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.78e-44;34!UBERON:0003528;1.40e-42;34!UBERON:0002020;1.40e-42;34!UBERON:0002791;4.45e-41;32!UBERON:0002780;4.77e-41;41!UBERON:0001890;4.77e-41;41!UBERON:0001869;8.30e-41;32!UBERON:0000073;1.94e-39;53!UBERON:0002616;1.94e-39;53!UBERON:0002619;2.79e-33;22!UBERON:0000956;6.42e-29;25!UBERON:0000203;6.42e-29;25!UBERON:0001950;3.56e-28;20!UBERON:0000125;3.91e-27;9!UBERON:0002308;3.91e-27;9!UBERON:0001017;5.22e-23;75!UBERON:0000955;1.00e-22;68!UBERON:0009663;2.80e-21;7!UBERON:0002420;2.81e-21;9!UBERON:0007245;2.81e-21;9!UBERON:0010009;2.81e-21;9!UBERON:0010011;2.81e-21;9!UBERON:0000454;2.81e-21;9!UBERON:0002298;1.03e-19;6!UBERON:0001016;5.60e-19;83!UBERON:0004732;2.32e-18;13!UBERON:0007023;5.97e-16;114!UBERON:0004733;9.02e-16;12!UBERON:0002028;9.02e-16;12!UBERON:0000200;2.33e-12;6!UBERON:0000369;2.77e-12;4!UBERON:0002435;2.77e-12;4!UBERON:0000204;2.77e-12;4!UBERON:0001896;6.46e-11;3!UBERON:0005290;6.46e-11;3!UBERON:0000988;1.59e-10;3!UBERON:0000349;3.32e-10;5!UBERON:0005383;1.16e-09;3!UBERON:0005382;1.16e-09;3!UBERON:0001872;1.47e-09;5!UBERON:0002021;1.82e-09;5!UBERON:0011216;7.24e-09;132!UBERON:0010314;1.60e-08;132!UBERON:0002680;2.61e-08;9!UBERON:0001895;2.61e-08;9!UBERON:0001897;1.17e-07;2!UBERON:0001875;1.17e-07;2!UBERON:0005162;1.17e-07;2!UBERON:0000122;1.17e-07;2!UBERON:0006514;1.17e-07;2!UBERON:0010225;1.17e-07;2!UBERON:0002784;1.29e-07;4!UBERON:0002148;1.48e-07;2!UBERON:0006331;1.48e-07;2!UBERON:0009662;1.48e-07;2!UBERON:0001894;2.37e-07;7!UBERON:0001873;2.85e-07;2!UBERON:0001954;2.85e-07;2!UBERON:0003022;2.85e-07;2!UBERON:0002421;2.85e-07;2!UBERON:0002600;2.85e-07;2!UBERON:0001871;3.28e-07;6!UBERON:0002771;6.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.84e-77,56;UBERON:0005068,6.84e-77,56;UBERON:0006241,6.84e-77,56;UBERON:0007135,6.84e-77,56;UBERON:0000073,6.09e-73,53;UBERON:0002616,6.09e-73,53;UBERON:0003075,4.52e-61,82;UBERON:0007284,4.52e-61,82;UBERON:0007023,1.30e-60,114;UBERON:0002346,9.97e-58,86;UBERON:0002780,1.63e-57,41;UBERON:0001890,1.63e-57,41;UBERON:0003080,1.63e-57,41;UBERON:0006240,1.63e-57,41;UBERON:0000955,3.80e-57,68;UBERON:0006238,3.80e-57,68;UBERON:0001017,3.34e-55,81;UBERON:0001016,4.61e-54,89;UBERON:0003528,3.55e-52,34;UBERON:0002020,3.55e-52,34;UBERON:0001893,5.89e-52,34;UBERON:0003056,8.22e-48,61;UBERON:0002791,1.11e-46,32;UBERON:0001869,2.35e-46,32;UBERON:0010371,7.75e-46,104;UBERON:0010314,1.65e-39,132;UBERON:0002619,2.73e-33,22;UBERON:0000956,6.30e-29,25;UBERON:0000203,6.30e-29,25;UBERON:0001950,4.02e-28,20;UBERON:0004121,2.33e-27,171;UBERON:0000924,2.33e-27,171;UBERON:0006601,2.33e-27,171;UBERON:0000125,2.78e-27,9;UBERON:0002308,2.78e-27,9;UBERON:0009663,2.18e-21,7;UBERON:0002420,2.54e-21,9;UBERON:0007245,2.54e-21,9;UBERON:0010009,2.54e-21,9;UBERON:0010011,2.54e-21,9;UBERON:0000454,2.54e-21,9;UBERON:0011216,2.61e-20,223;UBERON:0002298,9.61e-20,6;UBERON:0003076,1.53e-19,15;UBERON:0003057,1.53e-19,15;UBERON:0004732,1.56e-18,13;UBERON:0000025,1.81e-18,192;UBERON:0004733,6.17e-16,12;UBERON:0002028,6.17e-16,12;UBERON:0007277,6.17e-16,12;UBERON:0004111,1.64e-13,240;UBERON:0000200,1.93e-12,6;UBERON:0000369,2.10e-12,4;UBERON:0002435,2.10e-12,4;UBERON:0000204,2.10e-12,4;UBERON:0010082,2.10e-12,4;UBERON:0000483,3.75e-11,306;UBERON:0000119,6.20e-11,309;UBERON:0001896,6.38e-11,3;UBERON:0005290,6.38e-11,3;UBERON:0010096,6.38e-11,3;UBERON:0000988,1.50e-10,3;UBERON:0000349,3.33e-10,5;UBERON:0005383,8.10e-10,3;UBERON:0005382,8.10e-10,3;UBERON:0001872,1.21e-09,5;UBERON:0002021,2.29e-09,5;UBERON:0002680,1.93e-08,9;UBERON:0001895,1.93e-08,9;UBERON:0010092,1.93e-08,9;UBERON:0001897,1.08e-07,2;UBERON:0010225,1.08e-07,2;UBERON:0001875,1.19e-07,2;UBERON:0005162,1.19e-07,2;UBERON:0000122,1.19e-07,2;UBERON:0006514,1.19e-07,2;UBERON:0002148,1.35e-07,2;UBERON:0006331,1.35e-07,2;UBERON:0009662,1.35e-07,2;UBERON:0002784,1.64e-07,4;UBERON:0001954,2.30e-07,2;UBERON:0003022,2.30e-07,2;UBERON:0002421,2.30e-07,2;UBERON:0002600,2.30e-07,2;UBERON:0001873,2.45e-07,2;UBERON:0010122,2.45e-07,2;UBERON:0001894,2.95e-07,7;UBERON:0006222,2.95e-07,7;UBERON:0001871,3.05e-07,6;UBERON:0002771,4.52e-07,2 | |||
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|short_description=p4@ITPKB | |||
}} | }} |
Latest revision as of 02:02, 16 September 2015
Short description: | p4@ITPKB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITPKB_5end |
Coexpression cluster: | C3945_retina_medulla_substantia_thalamus_spinal_locus_globus |
Association with transcript: | 0bp_to_AK289700, AK313801_5end |
EntrezGene: | ITPKB |
HGNC: | 6179 |
UniProt: | Q2TU82B2R9J0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data