FFCP PHASE1:Hg19::chr20:37353121..37353137,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:37353121..37353137,+ to FFCP PHASE1:Hg19::chr20:37353121..37353137,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140679 | |EntrezGene=140679 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11018 | |HGNC=11018 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H598 | |UniProt=Q9H598 | ||
|association_with_transcript=16bp_to_ENST00000217420,NM_080552,uc002xjc.2_5end | |||
|cluster_id=chr20:37353121..37353137,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_SLC32A1_5end | |||
|id=chr20:37353121..37353137,+ | |||
|ontology_enrichment_celltype=CL:0000784!3.93e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;3.11e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,3.11e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.22e-18;82!UBERON:0006215;6.69e-10;3!UBERON:0010122;4.48e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.58e-75!57;UBERON:0005068!1.58e-75!57;UBERON:0006241!1.58e-75!57;UBERON:0007135!1.58e-75!57;UBERON:0001017!1.14e-70!82;UBERON:0005743!2.73e-69!86;UBERON:0002616!8.24e-66!59;UBERON:0000073!1.28e-63!94;UBERON:0001016!1.28e-63!94;UBERON:0002780!5.69e-63!41;UBERON:0001890!5.69e-63!41;UBERON:0006240!5.69e-63!41;UBERON:0000955!4.90e-62!69;UBERON:0006238!4.90e-62!69;UBERON:0003080!3.19e-61!42;UBERON:0002020!4.57e-57!34;UBERON:0003528!4.57e-57!34;UBERON:0001893!6.35e-57!34;UBERON:0003075!2.42e-56!86;UBERON:0007284!2.42e-56!86;UBERON:0002791!7.45e-55!33;UBERON:0001869!1.29e-53!32;UBERON:0002346!3.75e-53!90;UBERON:0003056!1.39e-45!61;UBERON:0002619!2.34e-41!22;UBERON:0000956!6.55e-39!25;UBERON:0000203!6.55e-39!25;UBERON:0001950!1.13e-37!20;UBERON:0000033!3.06e-36!123;UBERON:0007023!7.58e-36!115;UBERON:0000153!3.02e-35!129;UBERON:0007811!3.02e-35!129;UBERON:0004121!2.81e-33!169;UBERON:0000924!4.09e-32!173;UBERON:0006601!4.09e-32!173;UBERON:0002308!1.48e-19!9;UBERON:0000125!1.48e-19!9;UBERON:0002420!1.83e-19!9;UBERON:0007245!1.83e-19!9;UBERON:0010009!1.83e-19!9;UBERON:0010011!1.83e-19!9;UBERON:0000454!1.83e-19!9;UBERON:0009663!9.42e-16!7;UBERON:0000025!1.29e-15!194;UBERON:0003076!4.30e-15!15;UBERON:0003057!4.30e-15!15;UBERON:0004732!2.18e-14!13;UBERON:0000200!2.10e-13!6;UBERON:0001871!7.10e-13!7;UBERON:0004733!7.86e-13!12;UBERON:0002028!7.86e-13!12;UBERON:0007277!7.86e-13!12;UBERON:0002298!7.15e-12!8;UBERON:0001872!4.01e-11!5;UBERON:0000349!4.01e-11!5;UBERON:0002021!4.84e-11!5;UBERON:0004111!1.37e-10!241;UBERON:0000369!2.67e-10!4;UBERON:0002435!2.67e-10!4;UBERON:0000204!2.67e-10!4;UBERON:0010082!2.67e-10!4;UBERON:0000064!3.28e-09!219;UBERON:0000477!2.04e-08!286;UBERON:0000483!2.93e-08!309;UBERON:0005383!3.51e-08!3;UBERON:0005382!3.51e-08!3;UBERON:0002680!3.99e-08!9;UBERON:0001895!3.99e-08!9;UBERON:0010092!3.99e-08!9;UBERON:0000119!4.76e-08!312;UBERON:0001894!9.10e-08!7;UBERON:0006222!9.10e-08!7;UBERON:0002771!2.81e-07!3;UBERON:0000475!3.74e-07!365;UBERON:0000988!4.54e-07!3;UBERON:0006331!5.70e-07!3;UBERON:0001896!8.07e-07!3;UBERON:0005290!8.07e-07!3;UBERON:0010096!8.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.04e-66;32!UBERON:0001893;2.02e-64;34!UBERON:0003528;5.11e-64;34!UBERON:0002020;5.11e-64;34!UBERON:0002791;5.07e-62;32!UBERON:0002619;1.61e-60;22!UBERON:0002780;3.88e-57;41!UBERON:0001890;3.88e-57;41!UBERON:0001950;4.60e-55;20!UBERON:0000073;3.30e-54;53!UBERON:0002616;3.30e-54;53!UBERON:0000956;7.87e-53;25!UBERON:0000203;7.87e-53;25!UBERON:0000955;9.08e-39;68!UBERON:0001017;8.39e-38;75!UBERON:0001016;4.33e-30;83!UBERON:0000125;7.15e-23;9!UBERON:0002308;7.15e-23;9!UBERON:0002420;9.90e-23;9!UBERON:0007245;9.90e-23;9!UBERON:0010009;9.90e-23;9!UBERON:0010011;9.90e-23;9!UBERON:0000454;9.90e-23;9!UBERON:0004732;5.58e-21;13!UBERON:0000200;5.54e-19;6!UBERON:0004733;1.11e-18;12!UBERON:0002028;1.11e-18;12!UBERON:0009663;2.61e-17;7!UBERON:0002298;2.69e-17;6!UBERON:0001871;9.62e-16;6!UBERON:0001872;1.12e-15;5!UBERON:0000349;1.33e-15;5!UBERON:0002021;1.55e-15;5!UBERON:0007023;5.34e-15;114!UBERON:0000369;2.03e-14;4!UBERON:0002435;2.03e-14;4!UBERON:0000204;2.03e-14;4!UBERON:0002680;1.02e-11;9!UBERON:0001895;1.02e-11;9!UBERON:0005383;2.63e-11;3!UBERON:0005382;2.63e-11;3!UBERON:0011216;7.33e-11;132!UBERON:0001870;3.27e-10;3!UBERON:0000988;1.01e-09;3!UBERON:0001896;2.78e-09;3!UBERON:0005290;2.78e-09;3!UBERON:0010314;2.28e-08;132!UBERON:0001873;4.48e-08;2!UBERON:0001875;1.26e-07;2!UBERON:0006514;1.26e-07;2!UBERON:0001897;1.35e-07;2!UBERON:0010225;1.35e-07;2!UBERON:0001894;1.48e-07;7!UBERON:0002702;2.48e-07;2!UBERON:0002148;2.64e-07;2!UBERON:0006331;2.64e-07;2!UBERON:0009662;2.64e-07;2!UBERON:0002771;2.76e-07;2!UBERON:0001876;3.78e-07;2!UBERON:0001954;5.15e-07;2!UBERON:0003022;5.15e-07;2!UBERON:0002421;5.15e-07;2!UBERON:0002600;5.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.25e-101,56;UBERON:0005068,1.25e-101,56;UBERON:0006241,1.25e-101,56;UBERON:0007135,1.25e-101,56;UBERON:0000073,7.69e-98,53;UBERON:0002616,7.69e-98,53;UBERON:0001017,1.87e-91,81;UBERON:0000955,5.84e-85,68;UBERON:0006238,5.84e-85,68;UBERON:0001016,1.37e-84,89;UBERON:0002780,1.69e-79,41;UBERON:0001890,1.69e-79,41;UBERON:0003080,1.69e-79,41;UBERON:0006240,1.69e-79,41;UBERON:0003528,1.10e-74,34;UBERON:0002020,1.10e-74,34;UBERON:0001893,1.74e-74,34;UBERON:0001869,2.20e-74,32;UBERON:0003075,1.59e-72,82;UBERON:0007284,1.59e-72,82;UBERON:0002791,5.90e-69,32;UBERON:0002346,1.20e-68,86;UBERON:0002619,1.57e-60,22;UBERON:0003056,3.45e-57,61;UBERON:0001950,4.47e-55,20;UBERON:0010371,7.29e-55,104;UBERON:0000956,7.68e-53,25;UBERON:0000203,7.68e-53,25;UBERON:0007023,7.25e-48,114;UBERON:0010314,5.39e-43,132;UBERON:0004121,2.66e-42,171;UBERON:0000924,2.66e-42,171;UBERON:0006601,2.66e-42,171;UBERON:0011216,4.93e-31,223;UBERON:0000025,2.86e-23,192;UBERON:0000125,7.57e-23,9;UBERON:0002308,7.57e-23,9;UBERON:0002420,1.00e-22,9;UBERON:0007245,1.00e-22,9;UBERON:0010009,1.00e-22,9;UBERON:0010011,1.00e-22,9;UBERON:0000454,1.00e-22,9;UBERON:0003076,3.76e-22,15;UBERON:0003057,3.76e-22,15;UBERON:0004732,5.78e-21,13;UBERON:0000200,5.46e-19,6;UBERON:0004733,1.17e-18,12;UBERON:0002028,1.17e-18,12;UBERON:0007277,1.17e-18,12;UBERON:0004111,2.30e-17,240;UBERON:0009663,2.79e-17,7;UBERON:0002298,2.82e-17,6;UBERON:0001871,9.26e-16,6;UBERON:0001872,1.25e-15,5;UBERON:0000349,1.25e-15,5;UBERON:0002021,1.65e-15,5;UBERON:0000369,2.03e-14,4;UBERON:0002435,2.03e-14,4;UBERON:0000204,2.03e-14,4;UBERON:0010082,2.03e-14,4;UBERON:0000483,5.66e-12,306;UBERON:0000119,9.50e-12,309;UBERON:0002680,1.12e-11,9;UBERON:0001895,1.12e-11,9;UBERON:0010092,1.12e-11,9;UBERON:0005383,2.64e-11,3;UBERON:0005382,2.64e-11,3;UBERON:0001870,2.80e-10,3;UBERON:0000988,1.13e-09,3;UBERON:0001896,2.62e-09,3;UBERON:0005290,2.62e-09,3;UBERON:0010096,2.62e-09,3;UBERON:0001873,4.48e-08,2;UBERON:0010122,4.48e-08,2;UBERON:0001897,1.33e-07,2;UBERON:0010225,1.33e-07,2;UBERON:0001875,1.37e-07,2;UBERON:0006514,1.37e-07,2;UBERON:0001894,1.41e-07,7;UBERON:0006222,1.41e-07,7;UBERON:0002702,2.22e-07,2;UBERON:0002148,2.60e-07,2;UBERON:0006331,2.60e-07,2;UBERON:0009662,2.60e-07,2;UBERON:0002771,2.94e-07,2;UBERON:0001876,3.55e-07,2;UBERON:0001954,5.15e-07,2;UBERON:0003022,5.15e-07,2;UBERON:0002421,5.15e-07,2;UBERON:0002600,5.15e-07,2;UBERON:0000923,7.40e-07,560;UBERON:0010316,7.40e-07,560;UBERON:0005291,7.40e-07,560;UBERON:0006598,7.40e-07,560;UBERON:0010317,7.40e-07,560;UBERON:0002532,7.40e-07,560 | |||
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| ||
|short_description=p1@SLC32A1 | |||
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Latest revision as of 03:54, 16 September 2015
Short description: | p1@SLC32A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC32A1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 16bp_to_ENST00000217420, NM_080552, uc002xjc.2_5end |
EntrezGene: | SLC32A1 |
HGNC: | 11018 |
UniProt: | Q9H598 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 3.11e-11 | 3 |