FFCP PHASE1:Hg19::chr3:156008942..156008957,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:156008942..156008957,+ to FFCP PHASE1:Hg19::chr3:156008942..156008957,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7881 | |EntrezGene=7881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |HGNC=6228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=116bp_to_ENST00000302490_5end | |||
|cluster_id=chr3:156008942..156008957,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_KCNAB1_5end | |||
|id=chr3:156008942..156008957,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.52e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.96e-11;82!UBERON:0010122;8.17e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.93e-45!57;UBERON:0005068!3.93e-45!57;UBERON:0006241!3.93e-45!57;UBERON:0007135!3.93e-45!57;UBERON:0001869!1.06e-40!32;UBERON:0001893!1.08e-40!34;UBERON:0002780!2.20e-40!41;UBERON:0001890!2.20e-40!41;UBERON:0006240!2.20e-40!41;UBERON:0002020!2.68e-40!34;UBERON:0003528!2.68e-40!34;UBERON:0003080!3.47e-39!42;UBERON:0002791!5.99e-39!33;UBERON:0002616!1.60e-38!59;UBERON:0001017!2.11e-35!82;UBERON:0005743!1.05e-34!86;UBERON:0000955!1.42e-34!69;UBERON:0006238!1.42e-34!69;UBERON:0007023!1.64e-34!115;UBERON:0003075!1.59e-33!86;UBERON:0007284!1.59e-33!86;UBERON:0000073!6.13e-33!94;UBERON:0001016!6.13e-33!94;UBERON:0002346!6.85e-33!90;UBERON:0002619!1.05e-32!22;UBERON:0001950!2.60e-29!20;UBERON:0000025!3.35e-29!194;UBERON:0000956!4.07e-28!25;UBERON:0000203!4.07e-28!25;UBERON:0003056!1.98e-25!61;UBERON:0004111!4.52e-23!241;UBERON:0000153!9.50e-20!129;UBERON:0007811!9.50e-20!129;UBERON:0000477!2.48e-19!286;UBERON:0000033!3.83e-19!123;UBERON:0000924!1.78e-16!173;UBERON:0006601!1.78e-16!173;UBERON:0004121!2.07e-16!169;UBERON:0000483!1.12e-15!309;UBERON:0000119!2.49e-15!312;UBERON:0002420!7.15e-14!9;UBERON:0007245!7.15e-14!9;UBERON:0010009!7.15e-14!9;UBERON:0010011!7.15e-14!9;UBERON:0000454!7.15e-14!9;UBERON:0002308!1.29e-13!9;UBERON:0000125!1.29e-13!9;UBERON:0000200!6.09e-12!6;UBERON:0001871!4.52e-11!7;UBERON:0009663!7.24e-11!7;UBERON:0000349!6.35e-10!5;UBERON:0002021!7.77e-10!5;UBERON:0001637!8.19e-10!42;UBERON:0003509!8.19e-10!42;UBERON:0004572!8.19e-10!42;UBERON:0000369!3.49e-09!4;UBERON:0002435!3.49e-09!4;UBERON:0000204!3.49e-09!4;UBERON:0010082!3.49e-09!4;UBERON:0000922!3.77e-08!612;UBERON:0004872!4.21e-08!84;UBERON:0000475!4.35e-08!365;UBERON:0004573!4.74e-08!33;UBERON:0004571!4.74e-08!33;UBERON:0003076!9.51e-08!15;UBERON:0003057!9.51e-08!15;UBERON:0002050!1.67e-07!605;UBERON:0005423!1.67e-07!605;UBERON:0000468!1.75e-07!659;UBERON:0005383!2.65e-07!3;UBERON:0005382!2.65e-07!3;UBERON:0000481!3.44e-07!347;UBERON:0000064!4.14e-07!219;UBERON:0000923!4.16e-07!604;UBERON:0005291!4.16e-07!604;UBERON:0006598!4.16e-07!604;UBERON:0002532!4.16e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.64e-63;32!UBERON:0002791;1.25e-58;32!UBERON:0003528;5.60e-58;34!UBERON:0002020;5.60e-58;34!UBERON:0001893;2.10e-56;34!UBERON:0002619;1.45e-51;22!UBERON:0002780;3.95e-46;41!UBERON:0001890;3.95e-46;41!UBERON:0000956;4.22e-45;25!UBERON:0000203;4.22e-45;25!UBERON:0001950;1.23e-44;20!UBERON:0000073;3.83e-32;53!UBERON:0002616;3.83e-32;53!UBERON:0000955;2.39e-26;68!UBERON:0000200;1.47e-23;6!UBERON:0001017;8.12e-23;75!UBERON:0002420;2.06e-22;9!UBERON:0000125;2.06e-22;9!UBERON:0007245;2.06e-22;9!UBERON:0002308;2.06e-22;9!UBERON:0010009;2.06e-22;9!UBERON:0010011;2.06e-22;9!UBERON:0000454;2.06e-22;9!UBERON:0009663;6.08e-22;7!UBERON:0001016;6.01e-19;83!UBERON:0000369;7.11e-18;4!UBERON:0002435;7.11e-18;4!UBERON:0000204;7.11e-18;4!UBERON:0005383;7.26e-14;3!UBERON:0005382;7.26e-14;3!UBERON:0000349;4.10e-13;5!UBERON:0001872;6.07e-13;5!UBERON:0002021;6.07e-13;5!UBERON:0001870;1.41e-12;3!UBERON:0001873;8.17e-10;2!UBERON:0001875;1.38e-09;2!UBERON:0006514;1.38e-09;2!UBERON:0007023;2.87e-09;114!UBERON:0001871;2.88e-09;6!UBERON:0002702;3.79e-09;2!UBERON:0002771;6.28e-09;2!UBERON:0001954;6.28e-09;2!UBERON:0003022;6.28e-09;2!UBERON:0002421;6.28e-09;2!UBERON:0002600;6.28e-09;2!UBERON:0003834;1.36e-07;5!UBERON:0001533;1.36e-07;5!UBERON:0011216;2.09e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.74e-71,32;UBERON:0001893,4.89e-67,34;UBERON:0003528,1.19e-66,34;UBERON:0002020,1.19e-66,34;UBERON:0002791,1.38e-65,32;UBERON:0002780,8.86e-65,41;UBERON:0001890,8.86e-65,41;UBERON:0003080,8.86e-65,41;UBERON:0006240,8.86e-65,41;UBERON:0001049,2.53e-61,56;UBERON:0005068,2.53e-61,56;UBERON:0006241,2.53e-61,56;UBERON:0007135,2.53e-61,56;UBERON:0000073,6.87e-61,53;UBERON:0002616,6.87e-61,53;UBERON:0002619,4.02e-52,22;UBERON:0000955,4.04e-52,68;UBERON:0006238,4.04e-52,68;UBERON:0001017,9.08e-49,81;UBERON:0000956,1.37e-45,25;UBERON:0000203,1.37e-45,25;UBERON:0001950,3.93e-45,20;UBERON:0001016,3.37e-43,89;UBERON:0003075,1.20e-42,82;UBERON:0007284,1.20e-42,82;UBERON:0003056,1.12e-41,61;UBERON:0002346,2.51e-40,86;UBERON:0010371,1.70e-34,104;UBERON:0010314,2.71e-29,132;UBERON:0007023,6.53e-29,114;UBERON:0000200,8.51e-24,6;UBERON:0000025,6.36e-23,192;UBERON:0002420,1.31e-22,9;UBERON:0007245,1.31e-22,9;UBERON:0010009,1.31e-22,9;UBERON:0010011,1.31e-22,9;UBERON:0000454,1.31e-22,9;UBERON:0000125,2.39e-22,9;UBERON:0002308,2.39e-22,9;UBERON:0004121,5.10e-22,171;UBERON:0000924,5.10e-22,171;UBERON:0006601,5.10e-22,171;UBERON:0009663,5.13e-22,7;UBERON:0000369,7.01e-18,4;UBERON:0002435,7.01e-18,4;UBERON:0000204,7.01e-18,4;UBERON:0010082,7.01e-18,4;UBERON:0004111,9.80e-18,240;UBERON:0011216,7.08e-15,223;UBERON:0005383,7.29e-14,3;UBERON:0005382,7.29e-14,3;UBERON:0000349,2.68e-13,5;UBERON:0002021,2.86e-13,5;UBERON:0000483,4.96e-13,306;UBERON:0001872,5.05e-13,5;UBERON:0000119,8.13e-13,309;UBERON:0001870,1.09e-12,3;UBERON:0001873,8.19e-10,2;UBERON:0010122,8.19e-10,2;UBERON:0001875,1.15e-09,2;UBERON:0006514,1.15e-09,2;UBERON:0001871,2.59e-09,6;UBERON:0002702,3.23e-09,2;UBERON:0002771,5.47e-09,2;UBERON:0001954,5.47e-09,2;UBERON:0003022,5.47e-09,2;UBERON:0002421,5.47e-09,2;UBERON:0002600,5.47e-09,2;UBERON:0003834,1.52e-07,5;UBERON:0001533,1.52e-07,5;UBERON:0000922,6.55e-07,592 | |||
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| ||
|short_description=p5@KCNAB1 | |||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p5@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KCNAB1_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 116bp_to_ENST00000302490_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.52e-07 | 5 |