FFCP PHASE1:Hg19::chr5:161275320..161275386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2554 | |EntrezGene=2554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |HGNC=4075 | ||
|TSSclassifier=strong | |||
|UniProt=P14867 | |UniProt=P14867 | ||
|association_with_transcript=-63bp_to_ENST00000437025_5end | |association_with_transcript=-63bp_to_ENST00000437025_5end | ||
|cluster_id=chr5:161275320..161275386,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_GABRA1_5end | |description=CAGE_peak_2_at_GABRA1_5end | ||
|id=chr5:161275320..161275386,+ | |id=chr5:161275320..161275386,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.35e-22;82!UBERON:0006215;4.53e-13;3!UBERON:0010122;3.99e-08;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.09e-87!57;UBERON:0005068!8.09e-87!57;UBERON:0006241!8.09e-87!57;UBERON:0007135!8.09e-87!57;UBERON:0005743!3.73e-78!86;UBERON:0000073!7.28e-78!94;UBERON:0001016!7.28e-78!94;UBERON:0002616!5.18e-76!59;UBERON:0001017!2.22e-73!82;UBERON:0000955!4.32e-72!69;UBERON:0006238!4.32e-72!69;UBERON:0002780!1.31e-69!41;UBERON:0001890!1.31e-69!41;UBERON:0006240!1.31e-69!41;UBERON:0003080!9.66e-68!42;UBERON:0003075!6.26e-67!86;UBERON:0007284!6.26e-67!86;UBERON:0002346!2.33e-63!90;UBERON:0001893!5.22e-62!34;UBERON:0002020!6.53e-62!34;UBERON:0003528!6.53e-62!34;UBERON:0001869!7.87e-62!32;UBERON:0002791!1.89e-59!33;UBERON:0007023!1.99e-58!115;UBERON:0002619!2.40e-52!22;UBERON:0003056!5.82e-52!61;UBERON:0000153!2.67e-49!129;UBERON:0007811!2.67e-49!129;UBERON:0001950!1.23e-47!20;UBERON:0000033!2.80e-46!123;UBERON:0000956!1.59e-45!25;UBERON:0000203!1.59e-45!25;UBERON:0004121!2.95e-40!169;UBERON:0000924!5.50e-39!173;UBERON:0006601!5.50e-39!173;UBERON:0000025!9.85e-20!194;UBERON:0003076!2.89e-19!15;UBERON:0003057!2.89e-19!15;UBERON:0004732!8.99e-19!13;UBERON:0002420!1.44e-17!9;UBERON:0007245!1.44e-17!9;UBERON:0010009!1.44e-17!9;UBERON:0010011!1.44e-17!9;UBERON:0000454!1.44e-17!9;UBERON:0002308!1.88e-17!9;UBERON:0000125!1.88e-17!9;UBERON:0000200!8.91e-17!6;UBERON:0004733!9.25e-17!12;UBERON:0002028!9.25e-17!12;UBERON:0007277!9.25e-17!12;UBERON:0001871!7.94e-16!7;UBERON:0004111!5.29e-15!241;UBERON:0000477!2.66e-14!286;UBERON:0001872!9.15e-14!5;UBERON:0002021!9.15e-14!5;UBERON:0000483!9.63e-14!309;UBERON:0000349!1.66e-13!5;UBERON:0000119!1.79e-13!312;UBERON:0000064!3.78e-13!219;UBERON:0009663!6.40e-13!7;UBERON:0000475!1.11e-12!365;UBERON:0002298!3.50e-11!8;UBERON:0000369!7.13e-11!4;UBERON:0002435!7.13e-11!4;UBERON:0000204!7.13e-11!4;UBERON:0010082!7.13e-11!4;UBERON:0002680!9.97e-11!9;UBERON:0001895!9.97e-11!9;UBERON:0010092!9.97e-11!9;UBERON:0001894!4.06e-09!7;UBERON:0006222!4.06e-09!7;UBERON:0002771!4.24e-09!3;UBERON:0000988!1.15e-08!3;UBERON:0005383!1.96e-08!3;UBERON:0005382!1.96e-08!3;UBERON:0001896!3.42e-08!3;UBERON:0005290!3.42e-08!3;UBERON:0010096!3.42e-08!3;UBERON:0000481!4.97e-08!347;UBERON:0000922!1.84e-07!612;UBERON:0000062!3.26e-07!511;UBERON:0001870!6.63e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!8.09e-87!57;UBERON:0005068!8.09e-87!57;UBERON:0006241!8.09e-87!57;UBERON:0007135!8.09e-87!57;UBERON:0005743!3.73e-78!86;UBERON:0000073!7.28e-78!94;UBERON:0001016!7.28e-78!94;UBERON:0002616!5.18e-76!59;UBERON:0001017!2.22e-73!82;UBERON:0000955!4.32e-72!69;UBERON:0006238!4.32e-72!69;UBERON:0002780!1.31e-69!41;UBERON:0001890!1.31e-69!41;UBERON:0006240!1.31e-69!41;UBERON:0003080!9.66e-68!42;UBERON:0003075!6.26e-67!86;UBERON:0007284!6.26e-67!86;UBERON:0002346!2.33e-63!90;UBERON:0001893!5.22e-62!34;UBERON:0002020!6.53e-62!34;UBERON:0003528!6.53e-62!34;UBERON:0001869!7.87e-62!32;UBERON:0002791!1.89e-59!33;UBERON:0007023!1.99e-58!115;UBERON:0002619!2.40e-52!22;UBERON:0003056!5.82e-52!61;UBERON:0000153!2.67e-49!129;UBERON:0007811!2.67e-49!129;UBERON:0001950!1.23e-47!20;UBERON:0000033!2.80e-46!123;UBERON:0000956!1.59e-45!25;UBERON:0000203!1.59e-45!25;UBERON:0004121!2.95e-40!169;UBERON:0000924!5.50e-39!173;UBERON:0006601!5.50e-39!173;UBERON:0000025!9.85e-20!194;UBERON:0003076!2.89e-19!15;UBERON:0003057!2.89e-19!15;UBERON:0004732!8.99e-19!13;UBERON:0002420!1.44e-17!9;UBERON:0007245!1.44e-17!9;UBERON:0010009!1.44e-17!9;UBERON:0010011!1.44e-17!9;UBERON:0000454!1.44e-17!9;UBERON:0002308!1.88e-17!9;UBERON:0000125!1.88e-17!9;UBERON:0000200!8.91e-17!6;UBERON:0004733!9.25e-17!12;UBERON:0002028!9.25e-17!12;UBERON:0007277!9.25e-17!12;UBERON:0001871!7.94e-16!7;UBERON:0004111!5.29e-15!241;UBERON:0000477!2.66e-14!286;UBERON:0001872!9.15e-14!5;UBERON:0002021!9.15e-14!5;UBERON:0000483!9.63e-14!309;UBERON:0000349!1.66e-13!5;UBERON:0000119!1.79e-13!312;UBERON:0000064!3.78e-13!219;UBERON:0009663!6.40e-13!7;UBERON:0000475!1.11e-12!365;UBERON:0002298!3.50e-11!8;UBERON:0000369!7.13e-11!4;UBERON:0002435!7.13e-11!4;UBERON:0000204!7.13e-11!4;UBERON:0010082!7.13e-11!4;UBERON:0002680!9.97e-11!9;UBERON:0001895!9.97e-11!9;UBERON:0010092!9.97e-11!9;UBERON:0001894!4.06e-09!7;UBERON:0006222!4.06e-09!7;UBERON:0002771!4.24e-09!3;UBERON:0000988!1.15e-08!3;UBERON:0005383!1.96e-08!3;UBERON:0005382!1.96e-08!3;UBERON:0001896!3.42e-08!3;UBERON:0005290!3.42e-08!3;UBERON:0010096!3.42e-08!3;UBERON:0000481!4.97e-08!347;UBERON:0000922!1.84e-07!612;UBERON:0000062!3.26e-07!511;UBERON:0001870!6.63e-07!2 | ||
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|short_description=p2@GABRA1 | |short_description=p2@GABRA1 | ||
}} | }} |
Latest revision as of 17:23, 16 September 2015
Short description: | p2@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -63bp_to_ENST00000437025_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data