FFCP PHASE1:Hg19::chr10:123358259..123358284,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:123358259..123358284,- to FFCP PHASE1:Hg19::chr10:123358259..123358284,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2263 | |EntrezGene=2263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3689 | |HGNC=3689 | ||
|TSSclassifier=strong | |||
|UniProt=P21802 | |UniProt=P21802 | ||
|association_with_transcript=-287bp_to_ENST00000351936,ENST00000356226,ENST00000369062,NM_000141,NM_001144917,NM_001144918,NM_001144919,NM_022970,uc001lfm.2,uc001lfn.3,uc001lfo.1,uc010qtj.1,uc010qtk.1,uc010qtl.1,uc010qtm.1_5end | |||
|cluster_id=chr10:123358259..123358284,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_FGFR2_5end | |||
|id=chr10:123358259..123358284,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.24e-18;82!UBERON:0006215;3.51e-14;3!UBERON:0010122;6.30e-09;2!UBERON:0006241;4.53e-07;3!UBERON:0003057;4.53e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.09e-68!57;UBERON:0005068!9.09e-68!57;UBERON:0006241!9.09e-68!57;UBERON:0007135!9.09e-68!57;UBERON:0001017!1.17e-61!82;UBERON:0005743!2.19e-60!86;UBERON:0002616!6.54e-56!59;UBERON:0000073!1.78e-55!94;UBERON:0001016!1.78e-55!94;UBERON:0000955!4.72e-52!69;UBERON:0006238!4.72e-52!69;UBERON:0002780!3.42e-51!41;UBERON:0001890!3.42e-51!41;UBERON:0006240!3.42e-51!41;UBERON:0007023!3.85e-50!115;UBERON:0003080!1.02e-49!42;UBERON:0002020!9.48e-46!34;UBERON:0003528!9.48e-46!34;UBERON:0001893!1.08e-45!34;UBERON:0003075!1.87e-45!86;UBERON:0007284!1.87e-45!86;UBERON:0002791!6.34e-44!33;UBERON:0002346!9.91e-43!90;UBERON:0001869!6.74e-42!32;UBERON:0003056!1.13e-34!61;UBERON:0000033!8.78e-31!123;UBERON:0000956!2.93e-30!25;UBERON:0000203!2.93e-30!25;UBERON:0000153!8.41e-30!129;UBERON:0007811!8.41e-30!129;UBERON:0002619!3.51e-29!22;UBERON:0004121!5.83e-29!169;UBERON:0000924!7.15e-28!173;UBERON:0006601!7.15e-28!173;UBERON:0001950!5.83e-26!20;UBERON:0003076!2.38e-18!15;UBERON:0003057!2.38e-18!15;UBERON:0002308!3.50e-17!9;UBERON:0000125!3.50e-17!9;UBERON:0002420!1.68e-16!9;UBERON:0007245!1.68e-16!9;UBERON:0010009!1.68e-16!9;UBERON:0010011!1.68e-16!9;UBERON:0000454!1.68e-16!9;UBERON:0000025!2.33e-16!194;UBERON:0004732!3.60e-15!13;UBERON:0004111!1.85e-13!241;UBERON:0009663!1.90e-13!7;UBERON:0004733!2.29e-13!12;UBERON:0002028!2.29e-13!12;UBERON:0007277!2.29e-13!12;UBERON:0002298!7.80e-13!8;UBERON:0001871!3.55e-11!7;UBERON:0000477!4.36e-11!286;UBERON:0001872!5.38e-10!5;UBERON:0000349!1.15e-09!5;UBERON:0000483!2.06e-09!309;UBERON:0000119!3.63e-09!312;UBERON:0000064!6.91e-09!219;UBERON:0000200!2.23e-08!6;UBERON:0000475!2.45e-08!365;UBERON:0002680!2.94e-08!9;UBERON:0001895!2.94e-08!9;UBERON:0010092!2.94e-08!9;UBERON:0000062!3.20e-08!511;UBERON:0000369!5.69e-08!4;UBERON:0002435!5.69e-08!4;UBERON:0000204!5.69e-08!4;UBERON:0010082!5.69e-08!4;UBERON:0001896!2.34e-07!3;UBERON:0005290!2.34e-07!3;UBERON:0010096!2.34e-07!3;UBERON:0000988!2.59e-07!3;UBERON:0006331!2.69e-07!3;UBERON:0000922!2.94e-07!612;UBERON:0000481!3.81e-07!347;UBERON:0001894!4.69e-07!7;UBERON:0006222!4.69e-07!7;UBERON:0002240!6.92e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.56e-51;53!UBERON:0002616;7.56e-51;53!UBERON:0003528;1.65e-50;34!UBERON:0002020;1.65e-50;34!UBERON:0001893;5.59e-50;34!UBERON:0001869;2.28e-47;32!UBERON:0002791;1.67e-46;32!UBERON:0002780;2.04e-46;41!UBERON:0001890;2.04e-46;41!UBERON:0002619;2.34e-41;22!UBERON:0000956;3.72e-36;25!UBERON:0000203;3.72e-36;25!UBERON:0001950;8.34e-35;20!UBERON:0004732;4.87e-33;13!UBERON:0000955;1.52e-32;68!UBERON:0001017;1.30e-30;75!UBERON:0000125;4.71e-29;9!UBERON:0002308;4.71e-29;9!UBERON:0004733;5.28e-29;12!UBERON:0002028;5.28e-29;12!UBERON:0001016;4.48e-27;83!UBERON:0002298;8.37e-27;6!UBERON:0009663;5.32e-21;7!UBERON:0002680;1.54e-17;9!UBERON:0001895;1.54e-17;9!UBERON:0007023;2.53e-17;114!UBERON:0000200;4.80e-17;6!UBERON:0002420;3.31e-16;9!UBERON:0007245;3.31e-16;9!UBERON:0010009;3.31e-16;9!UBERON:0010011;3.31e-16;9!UBERON:0000454;3.31e-16;9!UBERON:0001896;2.36e-14;3!UBERON:0005290;2.36e-14;3!UBERON:0000988;3.21e-14;3!UBERON:0001872;2.39e-13;5!UBERON:0002021;3.78e-13;5!UBERON:0011216;1.07e-12;132!UBERON:0005162;2.55e-10;2!UBERON:0000122;2.55e-10;2!UBERON:0002148;5.32e-10;2!UBERON:0006331;5.32e-10;2!UBERON:0009662;5.32e-10;2!UBERON:0001897;8.24e-10;2!UBERON:0010225;8.24e-10;2!UBERON:0001875;1.17e-09;2!UBERON:0006514;1.17e-09;2!UBERON:0000369;1.56e-09;4!UBERON:0002435;1.56e-09;4!UBERON:0000204;1.56e-09;4!UBERON:0002771;3.52e-09;2!UBERON:0001873;6.30e-09;2!UBERON:0001954;6.30e-09;2!UBERON:0003022;6.30e-09;2!UBERON:0002421;6.30e-09;2!UBERON:0002600;6.30e-09;2!UBERON:0010314;7.35e-08;132!UBERON:0000349;1.02e-07;5!UBERON:0002037;2.72e-07;6!UBERON:0002240;4.53e-07;3!UBERON:0005174;4.53e-07;3!UBERON:0001137;4.53e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.36e-99,56;UBERON:0005068,1.36e-99,56;UBERON:0006241,1.36e-99,56;UBERON:0007135,1.36e-99,56;UBERON:0000073,1.11e-93,53;UBERON:0002616,1.11e-93,53;UBERON:0000955,3.23e-79,68;UBERON:0006238,3.23e-79,68;UBERON:0001017,1.41e-77,81;UBERON:0001016,4.11e-73,89;UBERON:0003075,7.51e-70,82;UBERON:0007284,7.51e-70,82;UBERON:0002346,2.98e-66,86;UBERON:0002780,2.30e-65,41;UBERON:0001890,2.30e-65,41;UBERON:0003080,2.30e-65,41;UBERON:0006240,2.30e-65,41;UBERON:0003528,6.82e-62,34;UBERON:0002020,6.82e-62,34;UBERON:0001893,8.56e-62,34;UBERON:0002791,1.66e-54,32;UBERON:0007023,1.82e-54,114;UBERON:0001869,2.57e-54,32;UBERON:0010371,1.90e-53,104;UBERON:0003056,6.88e-46,61;UBERON:0010314,9.17e-43,132;UBERON:0002619,3.41e-41,22;UBERON:0000956,5.16e-36,25;UBERON:0000203,5.16e-36,25;UBERON:0001950,1.13e-34,20;UBERON:0004121,1.53e-34,171;UBERON:0000924,1.53e-34,171;UBERON:0006601,1.53e-34,171;UBERON:0003076,2.35e-34,15;UBERON:0003057,2.35e-34,15;UBERON:0004732,5.14e-33,13;UBERON:0011216,9.31e-31,223;UBERON:0000125,2.80e-29,9;UBERON:0002308,2.80e-29,9;UBERON:0004733,5.56e-29,12;UBERON:0002028,5.56e-29,12;UBERON:0007277,5.56e-29,12;UBERON:0002298,8.77e-27,6;UBERON:0000025,1.11e-26,192;UBERON:0009663,3.35e-21,7;UBERON:0004111,1.21e-19,240;UBERON:0002680,1.54e-17,9;UBERON:0001895,1.54e-17,9;UBERON:0010092,1.54e-17,9;UBERON:0000200,4.57e-17,6;UBERON:0002420,2.32e-16,9;UBERON:0007245,2.32e-16,9;UBERON:0010009,2.32e-16,9;UBERON:0010011,2.32e-16,9;UBERON:0000454,2.32e-16,9;UBERON:0000483,1.24e-14,306;UBERON:0000119,2.09e-14,309;UBERON:0001896,2.53e-14,3;UBERON:0005290,2.53e-14,3;UBERON:0010096,2.53e-14,3;UBERON:0000988,3.15e-14,3;UBERON:0001872,1.61e-13,5;UBERON:0002021,5.59e-13,5;UBERON:0005162,2.50e-10,2;UBERON:0000122,2.50e-10,2;UBERON:0002148,5.09e-10,2;UBERON:0006331,5.09e-10,2;UBERON:0009662,5.09e-10,2;UBERON:0001897,7.56e-10,2;UBERON:0010225,7.56e-10,2;UBERON:0001875,1.07e-09,2;UBERON:0006514,1.07e-09,2;UBERON:0000369,1.14e-09,4;UBERON:0002435,1.14e-09,4;UBERON:0000204,1.14e-09,4;UBERON:0010082,1.14e-09,4;UBERON:0002771,3.38e-09,2;UBERON:0001873,5.57e-09,2;UBERON:0010122,5.57e-09,2;UBERON:0001954,6.85e-09,2;UBERON:0003022,6.85e-09,2;UBERON:0002421,6.85e-09,2;UBERON:0002600,6.85e-09,2;UBERON:0000349,8.95e-08,5;UBERON:0002037,2.75e-07,6;UBERON:0006215,2.75e-07,6;UBERON:0002240,4.60e-07,3;UBERON:0005174,4.60e-07,3;UBERON:0001137,4.60e-07,3;UBERON:0005423,7.67e-07,581;UBERON:0000923,9.15e-07,560;UBERON:0010316,9.15e-07,560;UBERON:0005291,9.15e-07,560;UBERON:0006598,9.15e-07,560;UBERON:0010317,9.15e-07,560;UBERON:0002532,9.15e-07,560 | |||
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| ||
|short_description=p5@FGFR2 | |||
}} | }} |
Latest revision as of 19:23, 16 September 2015
Short description: | p5@FGFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FGFR2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -287bp_to_ENST00000351936, ENST00000356226, ENST00000369062, NM_000141, NM_001144917, NM_001144918, NM_001144919, NM_022970, uc001lfm.2, uc001lfn.3, uc001lfo.1, uc010qtj.1, uc010qtk.1, uc010qtl.1, uc010qtm.1_5end |
EntrezGene: | FGFR2 |
HGNC: | 3689 |
UniProt: | P21802 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data