FFCP PHASE1:Hg19::chr9:2159850..2159880,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:2159850..2159880,+ to FFCP PHASE1:Hg19::chr9:2159850..2159880,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6595 | |EntrezGene=6595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11098 | |HGNC=11098 | ||
|TSSclassifier=strong | |||
|UniProt=F6UH26 | |UniProt=F6UH26 | ||
|association_with_transcript=-64bp_to_ENST00000416751_5end | |||
|cluster_id=chr9:2159850..2159880,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_14_at_SMARCA2_5end | |||
|id=chr9:2159850..2159880,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-17;82!UBERON:0010122;5.31e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-47!115;UBERON:0001017!3.77e-33!82;UBERON:0005743!4.11e-33!86;UBERON:0001049!2.90e-32!57;UBERON:0005068!2.90e-32!57;UBERON:0006241!2.90e-32!57;UBERON:0007135!2.90e-32!57;UBERON:0000073!2.33e-31!94;UBERON:0001016!2.33e-31!94;UBERON:0002616!1.26e-28!59;UBERON:0000955!4.22e-28!69;UBERON:0006238!4.22e-28!69;UBERON:0002780!9.13e-27!41;UBERON:0001890!9.13e-27!41;UBERON:0006240!9.13e-27!41;UBERON:0002020!2.43e-26!34;UBERON:0003528!2.43e-26!34;UBERON:0001893!2.87e-26!34;UBERON:0003080!8.58e-26!42;UBERON:0002791!2.95e-25!33;UBERON:0001869!9.44e-25!32;UBERON:0003075!1.37e-24!86;UBERON:0007284!1.37e-24!86;UBERON:0002346!1.47e-24!90;UBERON:0002619!4.77e-22!22;UBERON:0000153!1.53e-21!129;UBERON:0007811!1.53e-21!129;UBERON:0000033!3.63e-20!123;UBERON:0000956!5.61e-20!25;UBERON:0000203!5.61e-20!25;UBERON:0001950!7.54e-20!20;UBERON:0000924!2.82e-19!173;UBERON:0006601!2.82e-19!173;UBERON:0004121!5.36e-19!169;UBERON:0003056!1.41e-18!61;UBERON:0001871!8.74e-10!7;UBERON:0004111!2.27e-09!241;UBERON:0000025!8.78e-09!194;UBERON:0000477!1.34e-08!286;UBERON:0002420!4.93e-08!9;UBERON:0007245!4.93e-08!9;UBERON:0010009!4.93e-08!9;UBERON:0010011!4.93e-08!9;UBERON:0000454!4.93e-08!9;UBERON:0002308!8.70e-08!9;UBERON:0000125!8.70e-08!9;UBERON:0000200!1.02e-07!6;UBERON:0003076!1.12e-07!15;UBERON:0003057!1.12e-07!15;UBERON:0000064!3.78e-07!219;UBERON:0000349!5.03e-07!5;UBERON:0004733!8.25e-07!12;UBERON:0002028!8.25e-07!12;UBERON:0007277!8.25e-07!12;UBERON:0002298!9.89e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.14e-54;22!UBERON:0001869;5.07e-53;32!UBERON:0001893;3.91e-52;34!UBERON:0003528;6.38e-51;34!UBERON:0002020;6.38e-51;34!UBERON:0002791;3.13e-49;32!UBERON:0002780;1.57e-47;41!UBERON:0001890;1.57e-47;41!UBERON:0001950;1.58e-47;20!UBERON:0000956;4.55e-47;25!UBERON:0000203;4.55e-47;25!UBERON:0000073;2.62e-41;53!UBERON:0002616;2.62e-41;53!UBERON:0001017;1.42e-28;75!UBERON:0000955;2.09e-26;68!UBERON:0001871;6.72e-23;6!UBERON:0001016;1.24e-20;83!UBERON:0000200;9.25e-20;6!UBERON:0000349;1.38e-17;5!UBERON:0007023;3.36e-16;114!UBERON:0000369;4.82e-14;4!UBERON:0002435;4.82e-14;4!UBERON:0000204;4.82e-14;4!UBERON:0002420;1.88e-13;9!UBERON:0007245;1.88e-13;9!UBERON:0010009;1.88e-13;9!UBERON:0010011;1.88e-13;9!UBERON:0000454;1.88e-13;9!UBERON:0002298;2.05e-13;6!UBERON:0000125;6.34e-13;9!UBERON:0002308;6.34e-13;9!UBERON:0004733;3.02e-12;12!UBERON:0002028;3.02e-12;12!UBERON:0004732;3.18e-11;13!UBERON:0005383;3.47e-11;3!UBERON:0005382;3.47e-11;3!UBERON:0001870;6.64e-11;3!UBERON:0001872;9.75e-11;5!UBERON:0000988;2.65e-10;3!UBERON:0011216;2.16e-09;132!UBERON:0002680;1.10e-08;9!UBERON:0001895;1.10e-08;9!UBERON:0001876;3.02e-08;2!UBERON:0001954;3.47e-08;2!UBERON:0003022;3.47e-08;2!UBERON:0002421;3.47e-08;2!UBERON:0002600;3.47e-08;2!UBERON:0002771;4.56e-08;2!UBERON:0009663;5.15e-08;7!UBERON:0001873;5.31e-08;2!UBERON:0002702;8.21e-08;2!UBERON:0010314;1.57e-07;132!UBERON:0002148;2.02e-07;2!UBERON:0006331;2.02e-07;2!UBERON:0009662;2.02e-07;2!UBERON:0000007;3.77e-07;2!UBERON:0001894;4.24e-07;7!UBERON:0000341;6.94e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.76e-78,56;UBERON:0005068,2.76e-78,56;UBERON:0006241,2.76e-78,56;UBERON:0007135,2.76e-78,56;UBERON:0000073,1.25e-74,53;UBERON:0002616,1.25e-74,53;UBERON:0002780,1.63e-63,41;UBERON:0001890,1.63e-63,41;UBERON:0003080,1.63e-63,41;UBERON:0006240,1.63e-63,41;UBERON:0001017,8.21e-63,81;UBERON:0000955,3.95e-62,68;UBERON:0006238,3.95e-62,68;UBERON:0003528,1.63e-58,34;UBERON:0002020,1.63e-58,34;UBERON:0001893,2.52e-58,34;UBERON:0001869,8.84e-58,32;UBERON:0001016,1.35e-55,89;UBERON:0007023,3.16e-55,114;UBERON:0002619,6.88e-54,22;UBERON:0002791,5.09e-53,32;UBERON:0003075,1.50e-50,82;UBERON:0007284,1.50e-50,82;UBERON:0002346,9.34e-48,86;UBERON:0001950,1.81e-47,20;UBERON:0000956,5.03e-47,25;UBERON:0000203,5.03e-47,25;UBERON:0003056,2.36e-40,61;UBERON:0010371,8.01e-38,104;UBERON:0010314,6.15e-37,132;UBERON:0004121,4.45e-27,171;UBERON:0000924,4.45e-27,171;UBERON:0006601,4.45e-27,171;UBERON:0001871,6.44e-23,6;UBERON:0011216,7.01e-23,223;UBERON:0000025,9.61e-21,192;UBERON:0000200,1.04e-19,6;UBERON:0000349,1.13e-17,5;UBERON:0004111,2.03e-16,240;UBERON:0003076,1.30e-15,15;UBERON:0003057,1.30e-15,15;UBERON:0000369,4.84e-14,4;UBERON:0002435,4.84e-14,4;UBERON:0000204,4.84e-14,4;UBERON:0010082,4.84e-14,4;UBERON:0002298,1.73e-13,6;UBERON:0002420,1.85e-13,9;UBERON:0007245,1.85e-13,9;UBERON:0010009,1.85e-13,9;UBERON:0010011,1.85e-13,9;UBERON:0000454,1.85e-13,9;UBERON:0000125,6.92e-13,9;UBERON:0002308,6.92e-13,9;UBERON:0004733,2.65e-12,12;UBERON:0002028,2.65e-12,12;UBERON:0007277,2.65e-12,12;UBERON:0004732,2.83e-11,13;UBERON:0005383,3.98e-11,3;UBERON:0005382,3.98e-11,3;UBERON:0001870,6.34e-11,3;UBERON:0001872,1.31e-10,5;UBERON:0000483,1.32e-10,306;UBERON:0000119,2.12e-10,309;UBERON:0000988,2.49e-10,3;UBERON:0002680,1.05e-08,9;UBERON:0001895,1.05e-08,9;UBERON:0010092,1.05e-08,9;UBERON:0001876,2.93e-08,2;UBERON:0001954,3.36e-08,2;UBERON:0003022,3.36e-08,2;UBERON:0002421,3.36e-08,2;UBERON:0002600,3.36e-08,2;UBERON:0002771,4.26e-08,2;UBERON:0009663,5.16e-08,7;UBERON:0001873,5.98e-08,2;UBERON:0010122,5.98e-08,2;UBERON:0002702,7.56e-08,2;UBERON:0002148,2.31e-07,2;UBERON:0006331,2.31e-07,2;UBERON:0009662,2.31e-07,2;UBERON:0000922,2.76e-07,592;UBERON:0000007,3.49e-07,2;UBERON:0001894,3.68e-07,7;UBERON:0006222,3.68e-07,7;UBERON:0000341,4.64e-07,2;UBERON:0002050,4.77e-07,564 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0.795285947051099,0,0,0.221729397462564,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206105058476878,0,0,0,0,0.252433774244115,0,0.646584227275248,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.695582429850461,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.102827492703324,0,1.71495859578347,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.76228387266739,0,0.773288812777695,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0.15350367472613,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,12.9239194209619,6.33012373847307,0,0,0,0.597743964753209,0.552567831062295,0.755798243562828,0,0,0,0,0,0,0.394573622547734,0,0,1.93866549219044,4.82394110441627,0,0,0,0,0.682760689712998,0,0,0,0.291604613383254,0.173624994933292,6.20018970069687,4.10027891326387,3.05163472634166,0.884634079449797,1.47773809476774,4.16832254592548,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,1.01101699471016,0,1.87411556580271,0.182454789215666,0,0,0.789168805698781,2.41981432097328,2.14250933141343,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0.171986032471617,0,0,0,0.775912131907355,0.264768380074501,4.51961481561065,0,0,4.36844492095563,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.836822770498666,0,0,0,0.821432273351958,0,0.859530882839914,0,0.837847203816763,0.916641696046735,0,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,12.7236750369489,5.44813624446302,0.160753148465019,0.137539436597234,0,0,0,4.37396807937778,0,0.236417121897595,0.367182116944987,0,0.179287339332845,0,2.85878130549347,1.98627591109629,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,2.32709321450791,2.51241943311111,0,0,0.427149650270779,1.10043013569766,0.828478110694391,0,0.197611631897944,0,0,0,0,0.919036730290385,0.327872630709804,0,7.97461361970287,11.8365476954904,2.754200475543,10.3213655224213,1.55300672151593,0.993542447062135,0.276697269872462,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0.151230923763239,0.621748802331122,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,0,0,0.150257608997218,0,1.22061219961398,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.657852148736121,0.353378291891762,0,0,0,1.0362910251936,0,4.70078682915885,0.584580926518165,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.436838552768056,0,0,0.123935764259002,0,0.636008701306837,0.157723490002507,0.80057074828547,0,0,2.82608590424422,5.6678630530234,2.55414174491442,5.33302547025963,0.504143392443436,0.691572524642179,5.00574501458738,0,0,0.235939446695481,0.183428598521679,0,0,0,0,5.03909199940024,0,0,0,0,0,3.30934164630134,7.81078098613847,3.9270491335225,2.21955335678674,0,0.548257766857182,0.992422356778588,0.703484977438482,0.255524855279191,0,0,1.21393120847326,2.95960848756687,0.177404740325278,0,0,2.92269851800376,1.11813715056843,0,0,0.78493092850514,5.18481446722806,0,0.913158720509496,0,0,0.857718530119876,0,0,0,0,0,0.17071847709395,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.735444965261716,0,2.35570160537934,1.18818560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| ||
|short_description=p14@SMARCA2 | |||
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Latest revision as of 23:01, 16 September 2015
Short description: | p14@SMARCA2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_SMARCA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -64bp_to_ENST00000416751_5end |
EntrezGene: | SMARCA2 |
HGNC: | 11098 |
UniProt: | F6UH26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data