FFCP PHASE1:Hg19::chr16:6069333..6069361,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |EntrezGene=54715 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |HGNC=18222 | ||
|TSSclassifier=strong | |||
|UniProt=Q59HD3,Q9NWB1 | |UniProt=Q59HD3,Q9NWB1 | ||
|association_with_transcript=201bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | |association_with_transcript=201bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | ||
|cluster_id=chr16:6069333..6069361,+ | |||
|coexpression_cluster_id=C118 | |coexpression_cluster_id=C118 | ||
|description=CAGE_peak_10_at_RBFOX1_5end | |description=CAGE_peak_10_at_RBFOX1_5end | ||
|id=chr16:6069333..6069361,+ | |id=chr16:6069333..6069361,+ | ||
|ontology_enrichment_celltype=CL:0000047!2.62e-07!8 | |ontology_enrichment_celltype=CL:0000047!2.62e-07!8 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.80e-16;82!UBERON:0006215;2.73e-14;3!UBERON:0010122;4.91e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.00e-82!94;UBERON:0001016!1.00e-82!94;UBERON:0001049!4.22e-82!57;UBERON:0005068!4.22e-82!57;UBERON:0006241!4.22e-82!57;UBERON:0007135!4.22e-82!57;UBERON:0001017!1.27e-81!82;UBERON:0005743!3.51e-80!86;UBERON:0002616!2.39e-75!59;UBERON:0000955!2.20e-71!69;UBERON:0006238!2.20e-71!69;UBERON:0001893!6.61e-68!34;UBERON:0002020!1.28e-67!34;UBERON:0003528!1.28e-67!34;UBERON:0002780!4.35e-66!41;UBERON:0001890!4.35e-66!41;UBERON:0006240!4.35e-66!41;UBERON:0002791!2.32e-65!33;UBERON:0003080!2.68e-64!42;UBERON:0001869!7.42e-64!32;UBERON:0003075!9.39e-58!86;UBERON:0007284!9.39e-58!86;UBERON:0002619!3.73e-55!22;UBERON:0002346!1.36e-54!90;UBERON:0007023!6.49e-52!115;UBERON:0001950!1.10e-50!20;UBERON:0000956!5.93e-48!25;UBERON:0000203!5.93e-48!25;UBERON:0003056!7.59e-44!61;UBERON:0004121!1.13e-42!169;UBERON:0000924!2.52e-41!173;UBERON:0006601!2.52e-41!173;UBERON:0000153!9.19e-41!129;UBERON:0007811!9.19e-41!129;UBERON:0000033!7.63e-40!123;UBERON:0004732!2.15e-21!13;UBERON:0002420!3.96e-21!9;UBERON:0007245!3.96e-21!9;UBERON:0010009!3.96e-21!9;UBERON:0010011!3.96e-21!9;UBERON:0000454!3.96e-21!9;UBERON:0002308!9.61e-21!9;UBERON:0000125!9.61e-21!9;UBERON:0001871!5.23e-20!7;UBERON:0004733!2.30e-19!12;UBERON:0002028!2.30e-19!12;UBERON:0007277!2.30e-19!12;UBERON:0003076!4.11e-18!15;UBERON:0003057!4.11e-18!15;UBERON:0000025!5.16e-18!194;UBERON:0009663!1.37e-16!7;UBERON:0000200!1.02e-15!6;UBERON:0002298!3.16e-14!8;UBERON:0004111!1.65e-13!241;UBERON:0001872!1.91e-13!5;UBERON:0002680!2.35e-13!9;UBERON:0001895!2.35e-13!9;UBERON:0010092!2.35e-13!9;UBERON:0002021!3.75e-13!5;UBERON:0000349!5.30e-13!5;UBERON:0000064!2.23e-11!219;UBERON:0000369!9.34e-11!4;UBERON:0002435!9.34e-11!4;UBERON:0000204!9.34e-11!4;UBERON:0010082!9.34e-11!4;UBERON:0000483!3.40e-10!309;UBERON:0000477!4.33e-10!286;UBERON:0000119!5.70e-10!312;UBERON:0000475!6.12e-10!365;UBERON:0000922!1.49e-08!612;UBERON:0002771!1.59e-08!3;UBERON:0000988!2.31e-08!3;UBERON:0005383!2.37e-08!3;UBERON:0005382!2.37e-08!3;UBERON:0001896!7.08e-08!3;UBERON:0005290!7.08e-08!3;UBERON:0010096!7.08e-08!3;UBERON:0006331!1.04e-07!3;UBERON:0000468!1.14e-07!659;UBERON:0002037!3.31e-07!6;UBERON:0006215!3.31e-07!6;UBERON:0002050!9.44e-07!605;UBERON:0005423!9.44e-07!605 | |ontology_enrichment_uberon=UBERON:0000073!1.00e-82!94;UBERON:0001016!1.00e-82!94;UBERON:0001049!4.22e-82!57;UBERON:0005068!4.22e-82!57;UBERON:0006241!4.22e-82!57;UBERON:0007135!4.22e-82!57;UBERON:0001017!1.27e-81!82;UBERON:0005743!3.51e-80!86;UBERON:0002616!2.39e-75!59;UBERON:0000955!2.20e-71!69;UBERON:0006238!2.20e-71!69;UBERON:0001893!6.61e-68!34;UBERON:0002020!1.28e-67!34;UBERON:0003528!1.28e-67!34;UBERON:0002780!4.35e-66!41;UBERON:0001890!4.35e-66!41;UBERON:0006240!4.35e-66!41;UBERON:0002791!2.32e-65!33;UBERON:0003080!2.68e-64!42;UBERON:0001869!7.42e-64!32;UBERON:0003075!9.39e-58!86;UBERON:0007284!9.39e-58!86;UBERON:0002619!3.73e-55!22;UBERON:0002346!1.36e-54!90;UBERON:0007023!6.49e-52!115;UBERON:0001950!1.10e-50!20;UBERON:0000956!5.93e-48!25;UBERON:0000203!5.93e-48!25;UBERON:0003056!7.59e-44!61;UBERON:0004121!1.13e-42!169;UBERON:0000924!2.52e-41!173;UBERON:0006601!2.52e-41!173;UBERON:0000153!9.19e-41!129;UBERON:0007811!9.19e-41!129;UBERON:0000033!7.63e-40!123;UBERON:0004732!2.15e-21!13;UBERON:0002420!3.96e-21!9;UBERON:0007245!3.96e-21!9;UBERON:0010009!3.96e-21!9;UBERON:0010011!3.96e-21!9;UBERON:0000454!3.96e-21!9;UBERON:0002308!9.61e-21!9;UBERON:0000125!9.61e-21!9;UBERON:0001871!5.23e-20!7;UBERON:0004733!2.30e-19!12;UBERON:0002028!2.30e-19!12;UBERON:0007277!2.30e-19!12;UBERON:0003076!4.11e-18!15;UBERON:0003057!4.11e-18!15;UBERON:0000025!5.16e-18!194;UBERON:0009663!1.37e-16!7;UBERON:0000200!1.02e-15!6;UBERON:0002298!3.16e-14!8;UBERON:0004111!1.65e-13!241;UBERON:0001872!1.91e-13!5;UBERON:0002680!2.35e-13!9;UBERON:0001895!2.35e-13!9;UBERON:0010092!2.35e-13!9;UBERON:0002021!3.75e-13!5;UBERON:0000349!5.30e-13!5;UBERON:0000064!2.23e-11!219;UBERON:0000369!9.34e-11!4;UBERON:0002435!9.34e-11!4;UBERON:0000204!9.34e-11!4;UBERON:0010082!9.34e-11!4;UBERON:0000483!3.40e-10!309;UBERON:0000477!4.33e-10!286;UBERON:0000119!5.70e-10!312;UBERON:0000475!6.12e-10!365;UBERON:0000922!1.49e-08!612;UBERON:0002771!1.59e-08!3;UBERON:0000988!2.31e-08!3;UBERON:0005383!2.37e-08!3;UBERON:0005382!2.37e-08!3;UBERON:0001896!7.08e-08!3;UBERON:0005290!7.08e-08!3;UBERON:0010096!7.08e-08!3;UBERON:0006331!1.04e-07!3;UBERON:0000468!1.14e-07!659;UBERON:0002037!3.31e-07!6;UBERON:0006215!3.31e-07!6;UBERON:0002050!9.44e-07!605;UBERON:0005423!9.44e-07!605 | ||
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| ||
|short_description=p10@RBFOX1 | |short_description=p10@RBFOX1 | ||
}} | }} |
Latest revision as of 06:55, 17 September 2015
Short description: | p10@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RBFOX1_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 201bp_to_ENST00000550418, ENST00000553186, NM_001142333, NM_018723, uc002cyr.1, uc002cys.2, uc002cyt.2, uc010buf.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q59HD3Q9NWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data