FFCP PHASE1:Hg19::chr1:156117149..156117176,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:156117149..156117176,+
|short_description=p3@SEMA4A
|description=CAGE_peak_3_at_SEMA4A_5end
|association_with_transcript=0bp_to_ENST00000435124_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64218 | |EntrezGene=64218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |HGNC=10729 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCI6 | |UniProt=Q5TCI6 | ||
|association_with_transcript=0bp_to_ENST00000435124_5end | |||
|cluster_id=chr1:156117149..156117176,+ | |||
|coexpression_cluster_id=C3878 | |||
|description=CAGE_peak_3_at_SEMA4A_5end | |||
|id=chr1:156117149..156117176,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.81e-10;3!CL:0000149;1.24e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,3.86e-10,3;CL:0000149,1.06e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.92e-19;82!UBERON:0006241;4.88e-10;3!UBERON:0003057;4.88e-10;3!UBERON:0006215;1.24e-09;3!UBERON:0010122;6.99e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002791;2.01e-59;32!UBERON:0001893;2.23e-59;34!UBERON:0003528;5.46e-59;34!UBERON:0002020;5.46e-59;34!UBERON:0001869;1.09e-58;32!UBERON:0002619;5.83e-52;22!UBERON:0002780;3.61e-51;41!UBERON:0001890;3.61e-51;41!UBERON:0000073;5.32e-50;53!UBERON:0002616;5.32e-50;53!UBERON:0001950;8.47e-46;20!UBERON:0000956;2.53e-45;25!UBERON:0000203;2.53e-45;25!UBERON:0001017;5.15e-38;75!UBERON:0000955;5.14e-36;68!UBERON:0001016;1.29e-28;83!UBERON:0002420;1.50e-28;9!UBERON:0007245;1.50e-28;9!UBERON:0010009;1.50e-28;9!UBERON:0010011;1.50e-28;9!UBERON:0000454;1.50e-28;9!UBERON:0000125;7.88e-28;9!UBERON:0002308;7.88e-28;9!UBERON:0009663;3.40e-22;7!UBERON:0004733;2.87e-19;12!UBERON:0002028;2.87e-19;12!UBERON:0000200;3.48e-19;6!UBERON:0002298;2.40e-18;6!UBERON:0004732;1.18e-17;13!UBERON:0000349;1.53e-17;5!UBERON:0001871;8.62e-17;6!UBERON:0002021;2.79e-15;5!UBERON:0007023;1.11e-14;114!UBERON:0000369;2.40e-14;4!UBERON:0002435;2.40e-14;4!UBERON:0000204;2.40e-14;4!UBERON:0002680;7.52e-12;9!UBERON:0001895;7.52e-12;9!UBERON:0011216;9.22e-12;132!UBERON:0005383;4.09e-11;3!UBERON:0005382;4.09e-11;3!UBERON:0000966;1.19e-10;5!UBERON:0005388;1.19e-10;5!UBERON:0001802;1.19e-10;5!UBERON:0001870;1.44e-10;3!UBERON:0000988;3.46e-10;3!UBERON:0001781;4.81e-10;3!UBERON:0001782;4.81e-10;3!UBERON:0002240;4.88e-10;3!UBERON:0005174;4.88e-10;3!UBERON:0001137;4.88e-10;3!UBERON:0001896;7.10e-10;3!UBERON:0005290;7.10e-10;3!UBERON:0010314;5.21e-09;132!UBERON:0001876;4.52e-08;2!UBERON:0001954;6.22e-08;2!UBERON:0003022;6.22e-08;2!UBERON:0002421;6.22e-08;2!UBERON:0002600;6.22e-08;2!UBERON:0001873;6.99e-08;2!UBERON:0002702;1.75e-07;2!UBERON:0002771;2.16e-07;2!UBERON:0001897;2.49e-07;2!UBERON:0002148;2.49e-07;2!UBERON:0006331;2.49e-07;2!UBERON:0009662;2.49e-07;2!UBERON:0010225;2.49e-07;2!UBERON:0001875;4.00e-07;2!UBERON:0006514;4.00e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.72e-99,56;UBERON:0005068,6.72e-99,56;UBERON:0006241,6.72e-99,56;UBERON:0007135,6.72e-99,56;UBERON:0000073,1.85e-90,53;UBERON:0002616,1.85e-90,53;UBERON:0000955,1.53e-82,68;UBERON:0006238,1.53e-82,68;UBERON:0001017,8.50e-82,81;UBERON:0003075,2.41e-78,82;UBERON:0007284,2.41e-78,82;UBERON:0002346,3.38e-74,86;UBERON:0001016,1.26e-72,89;UBERON:0002780,2.56e-71,41;UBERON:0001890,2.56e-71,41;UBERON:0003080,2.56e-71,41;UBERON:0006240,2.56e-71,41;UBERON:0001893,4.25e-71,34;UBERON:0003528,4.85e-71,34;UBERON:0002020,4.85e-71,34;UBERON:0001869,7.51e-66,32;UBERON:0002791,2.51e-65,32;UBERON:0010371,1.89e-59,104;UBERON:0003056,5.15e-59,61;UBERON:0002619,5.69e-52,22;UBERON:0010314,6.28e-49,132;UBERON:0007023,9.09e-47,114;UBERON:0001950,8.05e-46,20;UBERON:0000956,2.48e-45,25;UBERON:0000203,2.48e-45,25;UBERON:0004121,5.58e-40,171;UBERON:0000924,5.58e-40,171;UBERON:0006601,5.58e-40,171;UBERON:0002420,2.21e-28,9;UBERON:0007245,2.21e-28,9;UBERON:0010009,2.21e-28,9;UBERON:0010011,2.21e-28,9;UBERON:0000454,2.21e-28,9;UBERON:0000125,1.08e-27,9;UBERON:0002308,1.08e-27,9;UBERON:0011216,1.75e-27,223;UBERON:0003076,3.62e-27,15;UBERON:0003057,3.62e-27,15;UBERON:0000025,6.98e-24,192;UBERON:0009663,4.90e-22,7;UBERON:0004733,2.43e-19,12;UBERON:0002028,2.43e-19,12;UBERON:0007277,2.43e-19,12;UBERON:0000200,3.32e-19,6;UBERON:0002298,2.19e-18,6;UBERON:0004732,1.01e-17,13;UBERON:0000349,1.61e-17,5;UBERON:0004111,6.88e-17,240;UBERON:0001871,9.24e-17,6;UBERON:0002021,2.28e-15,5;UBERON:0000369,2.45e-14,4;UBERON:0002435,2.45e-14,4;UBERON:0000204,2.45e-14,4;UBERON:0010082,2.45e-14,4;UBERON:0000483,2.68e-14,306;UBERON:0000119,4.79e-14,309;UBERON:0002680,6.81e-12,9;UBERON:0001895,6.81e-12,9;UBERON:0010092,6.81e-12,9;UBERON:0005383,4.16e-11,3;UBERON:0005382,4.16e-11,3;UBERON:0001870,1.54e-10,3;UBERON:0000988,3.41e-10,3;UBERON:0001782,3.86e-10,3;UBERON:0005424,3.86e-10,3;UBERON:0002240,5.62e-10,3;UBERON:0005174,5.62e-10,3;UBERON:0001137,5.62e-10,3;UBERON:0001896,6.57e-10,3;UBERON:0005290,6.57e-10,3;UBERON:0010096,6.57e-10,3;UBERON:0000966,6.13e-09,6;UBERON:0005388,6.13e-09,6;UBERON:0001802,6.13e-09,6;UBERON:0001876,4.60e-08,2;UBERON:0001954,6.44e-08,2;UBERON:0003022,6.44e-08,2;UBERON:0002421,6.44e-08,2;UBERON:0002600,6.44e-08,2;UBERON:0001873,7.11e-08,2;UBERON:0010122,7.11e-08,2;UBERON:0001781,1.06e-07,4;UBERON:0002702,1.78e-07,2;UBERON:0002771,2.02e-07,2;UBERON:0001897,2.37e-07,2;UBERON:0002148,2.37e-07,2;UBERON:0006331,2.37e-07,2;UBERON:0009662,2.37e-07,2;UBERON:0010225,2.37e-07,2;UBERON:0000923,2.40e-07,560;UBERON:0010316,2.40e-07,560;UBERON:0005291,2.40e-07,560;UBERON:0006598,2.40e-07,560;UBERON:0010317,2.40e-07,560;UBERON:0002532,2.40e-07,560;UBERON:0002050,3.36e-07,564;UBERON:0001875,4.74e-07,2;UBERON:0006514,4.74e-07,2;UBERON:0000922,8.11e-07,592 | |||
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| ||
|short_description=p3@SEMA4A | |||
}} | }} |
Latest revision as of 15:10, 17 September 2015
Short description: | p3@SEMA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEMA4A_5end |
Coexpression cluster: | C3878_retina_temporal_amygdala_nucleus_putamen_insula_olfactory |
Association with transcript: | 0bp_to_ENST00000435124_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | Q5TCI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 3.86e-10 | 3 |
visual pigment cell | 1.06e-07 | 4 |