FFCP PHASE1:Hg19::chr2:55253997..55254036,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14085 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQC3 | |||
|association_with_transcript=-205bp_to_AF063601_5end | |||
|cluster_id=chr2:55253997..55254036,- | |||
|description=CAGE_peak_18_at_RTN4_5end | |||
|id=chr2:55253997..55254036,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.92e-15;82!UBERON:0006241;6.50e-10;3!UBERON:0003057;6.50e-10;3!UBERON:0006215;5.40e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-37!57;UBERON:0005068!1.35e-37!57;UBERON:0006241!1.35e-37!57;UBERON:0007135!1.35e-37!57;UBERON:0001017!5.52e-37!82;UBERON:0005743!3.54e-35!86;UBERON:0000073!9.48e-35!94;UBERON:0001016!9.48e-35!94;UBERON:0000955!8.15e-31!69;UBERON:0006238!8.15e-31!69;UBERON:0002780!3.13e-30!41;UBERON:0001890!3.13e-30!41;UBERON:0006240!3.13e-30!41;UBERON:0002616!4.84e-30!59;UBERON:0003080!4.48e-29!42;UBERON:0002020!1.88e-27!34;UBERON:0003528!1.88e-27!34;UBERON:0001893!3.10e-27!34;UBERON:0002791!1.98e-26!33;UBERON:0002346!1.54e-25!90;UBERON:0001869!1.92e-25!32;UBERON:0003075!4.96e-25!86;UBERON:0007284!4.96e-25!86;UBERON:0007023!1.69e-21!115;UBERON:0000956!9.93e-20!25;UBERON:0000203!9.93e-20!25;UBERON:0003056!1.17e-18!61;UBERON:0002619!1.80e-18!22;UBERON:0001950!9.19e-17!20;UBERON:0000924!1.39e-15!173;UBERON:0006601!1.39e-15!173;UBERON:0004121!5.47e-15!169;UBERON:0000033!1.97e-13!123;UBERON:0000153!5.16e-13!129;UBERON:0007811!5.16e-13!129;UBERON:0003076!1.53e-09!15;UBERON:0003057!1.53e-09!15;UBERON:0002308!3.47e-09!9;UBERON:0000125!3.47e-09!9;UBERON:0002420!4.74e-09!9;UBERON:0007245!4.74e-09!9;UBERON:0010009!4.74e-09!9;UBERON:0010011!4.74e-09!9;UBERON:0000454!4.74e-09!9;UBERON:0004732!7.69e-08!13;UBERON:0009663!2.34e-07!7;UBERON:0004733!3.93e-07!12;UBERON:0002028!3.93e-07!12;UBERON:0007277!3.93e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;9.21e-56;34!UBERON:0002020;9.21e-56;34!UBERON:0001893;4.05e-55;34!UBERON:0002791;6.81e-54;32!UBERON:0001869;1.68e-53;32!UBERON:0002619;7.32e-48;22!UBERON:0002780;1.24e-47;41!UBERON:0001890;1.24e-47;41!UBERON:0000073;1.07e-45;53!UBERON:0002616;1.07e-45;53!UBERON:0001950;2.32e-42;20!UBERON:0000956;1.10e-41;25!UBERON:0000203;1.10e-41;25!UBERON:0001017;3.18e-31;75!UBERON:0000955;8.86e-31;68!UBERON:0001016;1.29e-27;83!UBERON:0000125;9.03e-26;9!UBERON:0002308;9.03e-26;9!UBERON:0002420;3.72e-25;9!UBERON:0007245;3.72e-25;9!UBERON:0010009;3.72e-25;9!UBERON:0010011;3.72e-25;9!UBERON:0000454;3.72e-25;9!UBERON:0004732;1.90e-20;13!UBERON:0009663;6.24e-20;7!UBERON:0004733;3.30e-18;12!UBERON:0002028;3.30e-18;12!UBERON:0000200;8.47e-18;6!UBERON:0002298;1.35e-17;6!UBERON:0001871;3.40e-15;6!UBERON:0001872;3.92e-15;5!UBERON:0000349;8.29e-15;5!UBERON:0007023;7.00e-14;114!UBERON:0000369;7.01e-12;4!UBERON:0002435;7.01e-12;4!UBERON:0000204;7.01e-12;4!UBERON:0002680;1.74e-11;9!UBERON:0001895;1.74e-11;9!UBERON:0000988;2.46e-10;3!UBERON:0011216;2.88e-10;132!UBERON:0001870;6.50e-10;3!UBERON:0002240;6.50e-10;3!UBERON:0005174;6.50e-10;3!UBERON:0001137;6.50e-10;3!UBERON:0002021;7.60e-10;5!UBERON:0005383;1.56e-09;3!UBERON:0005382;1.56e-09;3!UBERON:0001896;5.40e-09;3!UBERON:0005290;5.40e-09;3!UBERON:0010314;4.89e-08;132!UBERON:0002148;1.49e-07;2!UBERON:0006331;1.49e-07;2!UBERON:0009662;1.49e-07;2!UBERON:0002771;1.61e-07;2!UBERON:0001897;1.77e-07;2!UBERON:0010225;1.77e-07;2!UBERON:0002702;2.69e-07;2!UBERON:0001954;3.18e-07;2!UBERON:0003022;3.18e-07;2!UBERON:0002421;3.18e-07;2!UBERON:0002600;3.18e-07;2!UBERON:0001876;6.56e-07;2!UBERON:0001875;8.68e-07;2!UBERON:0006514;8.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.09e-92,56;UBERON:0005068,6.09e-92,56;UBERON:0006241,6.09e-92,56;UBERON:0007135,6.09e-92,56;UBERON:0000073,8.36e-84,53;UBERON:0002616,8.36e-84,53;UBERON:0001017,2.87e-82,81;UBERON:0001016,4.90e-76,89;UBERON:0000955,2.25e-72,68;UBERON:0006238,2.25e-72,68;UBERON:0002780,8.38e-66,41;UBERON:0001890,8.38e-66,41;UBERON:0003080,8.38e-66,41;UBERON:0006240,8.38e-66,41;UBERON:0003528,1.59e-65,34;UBERON:0002020,1.59e-65,34;UBERON:0003075,2.78e-65,82;UBERON:0007284,2.78e-65,82;UBERON:0001893,6.62e-65,34;UBERON:0002346,1.00e-61,86;UBERON:0002791,9.25e-60,32;UBERON:0001869,2.37e-59,32;UBERON:0010371,4.43e-49,104;UBERON:0002619,6.91e-48,22;UBERON:0003056,2.02e-44,61;UBERON:0007023,6.36e-44,114;UBERON:0001950,1.74e-42,20;UBERON:0010314,3.94e-42,132;UBERON:0000956,1.04e-41,25;UBERON:0000203,1.04e-41,25;UBERON:0004121,2.61e-37,171;UBERON:0000924,2.61e-37,171;UBERON:0006601,2.61e-37,171;UBERON:0011216,4.96e-27,223;UBERON:0003076,6.82e-26,15;UBERON:0003057,6.82e-26,15;UBERON:0000125,7.75e-26,9;UBERON:0002308,7.75e-26,9;UBERON:0002420,2.10e-25,9;UBERON:0007245,2.10e-25,9;UBERON:0010009,2.10e-25,9;UBERON:0010011,2.10e-25,9;UBERON:0000454,2.10e-25,9;UBERON:0000025,2.68e-21,192;UBERON:0004732,1.58e-20,13;UBERON:0009663,5.13e-20,7;UBERON:0004733,2.66e-18,12;UBERON:0002028,2.66e-18,12;UBERON:0007277,2.66e-18,12;UBERON:0000200,6.63e-18,6;UBERON:0002298,1.38e-17,6;UBERON:0004111,1.07e-15,240;UBERON:0001871,2.21e-15,6;UBERON:0001872,3.61e-15,5;UBERON:0000349,7.31e-15,5;UBERON:0000369,6.54e-12,4;UBERON:0002435,6.54e-12,4;UBERON:0000204,6.54e-12,4;UBERON:0010082,6.54e-12,4;UBERON:0002680,1.43e-11,9;UBERON:0001895,1.43e-11,9;UBERON:0010092,1.43e-11,9;UBERON:0000483,2.36e-11,306;UBERON:0000119,3.94e-11,309;UBERON:0000988,2.51e-10,3;UBERON:0001870,6.43e-10,3;UBERON:0002240,8.93e-10,3;UBERON:0005174,8.93e-10,3;UBERON:0001137,8.93e-10,3;UBERON:0002021,9.39e-10,5;UBERON:0005383,1.48e-09,3;UBERON:0005382,1.48e-09,3;UBERON:0001896,5.41e-09,3;UBERON:0005290,5.41e-09,3;UBERON:0010096,5.41e-09,3;UBERON:0002771,1.38e-07,2;UBERON:0002148,1.57e-07,2;UBERON:0006331,1.57e-07,2;UBERON:0009662,1.57e-07,2;UBERON:0001897,1.62e-07,2;UBERON:0010225,1.62e-07,2;UBERON:0000923,2.13e-07,560;UBERON:0010316,2.13e-07,560;UBERON:0005291,2.13e-07,560;UBERON:0006598,2.13e-07,560;UBERON:0010317,2.13e-07,560;UBERON:0002532,2.13e-07,560;UBERON:0002702,2.82e-07,2;UBERON:0002050,3.04e-07,564;UBERON:0001954,4.19e-07,2;UBERON:0003022,4.19e-07,2;UBERON:0002421,4.19e-07,2;UBERON:0002600,4.19e-07,2;UBERON:0001876,4.45e-07,2;UBERON:0001875,7.85e-07,2;UBERON:0006514,7.85e-07,2;UBERON:0000922,8.49e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0.802177789880567,1.08505435357926,0.223915474239924,0,0,0,0,0.485168122375632,0,0,0,0,0,0.47296445977717,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0,0,1.27867425159808,0,0,0,0.870627715885752,0,0,0.502497330513487,1.0429658368404,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,1.17903228824749,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,1.60464117470104,1.01377082717959,0,0,0,0,0,0.289693037921647,0,0,0,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0.649094787309367,0,0.398873881556595,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0.272746120590835,0,0.243947412259191,0.530119073285941,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.579125226670317,0.205476322550383,0,0.112085143993527,0.394061520403854,0.431255149719035,0.77005821767849,0,1.30139853857622,3.86644406388848,1.34013012267479,3.82763250991898,2.99602809578873,8.97484377612075,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.290033387828457,0.170453254832202,2.1367688555217,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0.144269212976445,0.497992903438899,0.478278818186467,0.59873811429845,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0.307160702099232,4.97073823883149,1.82870241333667,0,0,0,0,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,1.93866549219044,2.31920245404628,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,1.77148277162768,2.17073589525734,1.52581736317083,1.65868889896837,2.95547618953547,0.658156191461918,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0.392125068635479,0,0.37950746544837,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0,0,2.6286441862464,0,5.85661114313348,0.364909578431332,0.19566461893209,0.242780379534093,0,0,3.97894590119637,0,0,0,0.664653872707185,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0.176512253383001,3.61569185248852,0.274083849293502,0.19871461170299,2.72236422610278,0.195551382734803,0,0,0.19980960958213,0.288180834308212,0,0,0,0,0.235694034616795,0.271808412147228,0,0.101998217636322,0,1.80126086612937,3.14882371451584,0,0,0,1.11712960508902,0.916641696046735,0,0.798716001995964,0.858452096273142,0.223171457441873,0.335917362433631,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0.169346664131569,3.18091875923721,3.26888174667781,0.160753148465019,0.412618309791701,0.415440338029185,0,1.5476039091159,0.607495566580247,0,0,0,0,0.179287339332845,0.383830394638891,1.42939065274673,0.662091970365432,0,0,0,0,0,0.082092520749339,0.170388021785422,0.226624183040251,0.146552233678082,0,4.52490347265427,5.2893040697076,0,0,0.106787412567695,0,0.828478110694391,0,0,0.121792598380896,0,0.544017803369474,0,0,0,0,6.2024772597689,16.717598291569,2.3786276834235,1.14681839138014,2.99508439149501,1.55241007353459,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.734210113519403,0.179088841081487,0,0,0.353378291891762,0,0,0.256241518587947,0,0,3.87123621224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| |||
|short_description=p18@RTN4 | |||
}} |
Latest revision as of 16:48, 17 September 2015
Short description: | p18@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -205bp_to_AF063601_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data