FFCP PHASE1:Hg19::chr9:87284248..87284254,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:87284248..87284254,+ to FFCP PHASE1:Hg19::chr9:87284248..87284254,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4915 | |EntrezGene=4915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8032 | |HGNC=8032 | ||
|TSSclassifier=strong | |||
|UniProt=Q16620,Q59GJ1 | |UniProt=Q16620,Q59GJ1 | ||
|association_with_transcript=-340bp_to_NM_001018065,NM_001018066,uc004aob.1,uc011lsz.1,uc011lta.1_5end | |||
|cluster_id=chr9:87284248..87284254,+ | |||
|coexpression_cluster_id=C963 | |||
|description=CAGE_peak_27_at_NTRK2_5end | |||
|id=chr9:87284248..87284254,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.29e-20;82!UBERON:0010122;1.81e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.77e-55!57;UBERON:0005068!4.77e-55!57;UBERON:0006241!4.77e-55!57;UBERON:0007135!4.77e-55!57;UBERON:0007023!6.71e-54!115;UBERON:0002616!8.36e-50!59;UBERON:0000955!4.22e-47!69;UBERON:0006238!4.22e-47!69;UBERON:0002780!5.04e-46!41;UBERON:0001890!5.04e-46!41;UBERON:0006240!5.04e-46!41;UBERON:0003080!1.09e-44!42;UBERON:0003075!1.31e-44!86;UBERON:0007284!1.31e-44!86;UBERON:0001017!7.48e-44!82;UBERON:0001893!1.42e-43!34;UBERON:0002020!2.66e-43!34;UBERON:0003528!2.66e-43!34;UBERON:0005743!6.63e-43!86;UBERON:0002346!5.99e-42!90;UBERON:0002791!1.15e-41!33;UBERON:0001869!6.52e-40!32;UBERON:0000073!1.82e-37!94;UBERON:0001016!1.82e-37!94;UBERON:0003056!6.81e-35!61;UBERON:0002619!2.29e-32!22;UBERON:0000956!1.64e-30!25;UBERON:0000203!1.64e-30!25;UBERON:0000153!1.13e-29!129;UBERON:0007811!1.13e-29!129;UBERON:0000033!2.94e-29!123;UBERON:0001950!1.36e-28!20;UBERON:0004121!5.65e-21!169;UBERON:0000924!3.94e-20!173;UBERON:0006601!3.94e-20!173;UBERON:0002308!3.68e-14!9;UBERON:0000125!3.68e-14!9;UBERON:0000200!1.62e-12!6;UBERON:0002298!3.86e-12!8;UBERON:0004733!9.10e-12!12;UBERON:0002028!9.10e-12!12;UBERON:0007277!9.10e-12!12;UBERON:0000025!9.32e-12!194;UBERON:0000064!1.99e-11!219;UBERON:0003076!2.11e-11!15;UBERON:0003057!2.11e-11!15;UBERON:0002420!4.49e-11!9;UBERON:0007245!4.49e-11!9;UBERON:0010009!4.49e-11!9;UBERON:0010011!4.49e-11!9;UBERON:0000454!4.49e-11!9;UBERON:0009663!1.02e-10!7;UBERON:0004732!1.05e-10!13;UBERON:0001872!1.37e-10!5;UBERON:0000062!2.23e-10!511;UBERON:0000475!5.27e-10!365;UBERON:0000477!5.28e-10!286;UBERON:0004111!3.88e-09!241;UBERON:0001871!3.93e-09!7;UBERON:0000369!4.29e-09!4;UBERON:0002435!4.29e-09!4;UBERON:0000204!4.29e-09!4;UBERON:0010082!4.29e-09!4;UBERON:0000483!5.63e-09!309;UBERON:0000119!9.64e-09!312;UBERON:0000481!8.11e-08!347;UBERON:0002021!2.37e-07!5;UBERON:0000349!2.40e-07!5;UBERON:0005383!2.45e-07!3;UBERON:0005382!2.45e-07!3;UBERON:0001896!4.23e-07!3;UBERON:0005290!4.23e-07!3;UBERON:0010096!4.23e-07!3;UBERON:0002771!4.58e-07!3;UBERON:0002680!4.99e-07!9;UBERON:0001895!4.99e-07!9;UBERON:0010092!4.99e-07!9;UBERON:0006331!5.81e-07!3;UBERON:0000988!8.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.34e-67;34!UBERON:0003528;1.49e-62;34!UBERON:0002020;1.49e-62;34!UBERON:0001869;5.01e-61;32!UBERON:0002791;8.59e-61;32!UBERON:0002780;1.64e-57;41!UBERON:0001890;1.64e-57;41!UBERON:0002619;1.30e-54;22!UBERON:0000073;6.96e-50;53!UBERON:0002616;6.96e-50;53!UBERON:0000956;7.55e-48;25!UBERON:0000203;7.55e-48;25!UBERON:0001950;2.13e-46;20!UBERON:0000125;2.66e-31;9!UBERON:0002308;2.66e-31;9!UBERON:0001017;1.93e-30;75!UBERON:0000955;5.88e-30;68!UBERON:0002298;4.62e-27;6!UBERON:0002420;2.10e-24;9!UBERON:0007245;2.10e-24;9!UBERON:0010009;2.10e-24;9!UBERON:0010011;2.10e-24;9!UBERON:0000454;2.10e-24;9!UBERON:0009663;4.03e-23;7!UBERON:0001016;1.18e-22;83!UBERON:0000200;2.05e-19;6!UBERON:0000369;8.97e-19;4!UBERON:0002435;8.97e-19;4!UBERON:0000204;8.97e-19;4!UBERON:0000349;1.82e-15;5!UBERON:0002021;2.19e-15;5!UBERON:0001872;1.02e-14;5!UBERON:0001896;1.26e-14;3!UBERON:0005383;1.26e-14;3!UBERON:0005290;1.26e-14;3!UBERON:0005382;1.26e-14;3!UBERON:0000988;3.31e-14;3!UBERON:0007023;4.00e-14;114!UBERON:0004733;3.00e-13;12!UBERON:0002028;3.00e-13;12!UBERON:0004732;3.48e-12;13!UBERON:0001871;5.12e-11;6!UBERON:0001954;1.43e-10;2!UBERON:0003022;1.43e-10;2!UBERON:0002421;1.43e-10;2!UBERON:0002600;1.43e-10;2!UBERON:0002771;1.81e-10;2!UBERON:0001873;1.81e-10;2!UBERON:0002148;4.82e-10;2!UBERON:0006331;4.82e-10;2!UBERON:0009662;4.82e-10;2!UBERON:0011216;5.61e-10;132!UBERON:0001870;3.02e-07;3!UBERON:0010314;4.46e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.73e-92,56;UBERON:0005068,3.73e-92,56;UBERON:0006241,3.73e-92,56;UBERON:0007135,3.73e-92,56;UBERON:0000073,1.15e-91,53;UBERON:0002616,1.15e-91,53;UBERON:0002780,1.78e-80,41;UBERON:0001890,1.78e-80,41;UBERON:0003080,1.78e-80,41;UBERON:0006240,1.78e-80,41;UBERON:0000955,2.99e-78,68;UBERON:0006238,2.99e-78,68;UBERON:0001893,6.48e-78,34;UBERON:0003528,2.38e-77,34;UBERON:0002020,2.38e-77,34;UBERON:0001017,6.39e-73,81;UBERON:0001869,8.31e-70,32;UBERON:0002791,1.35e-69,32;UBERON:0001016,4.91e-65,89;UBERON:0003075,5.73e-61,82;UBERON:0007284,5.73e-61,82;UBERON:0002346,8.01e-58,86;UBERON:0002619,4.12e-55,22;UBERON:0003056,1.95e-52,61;UBERON:0000956,2.74e-48,25;UBERON:0000203,2.74e-48,25;UBERON:0007023,4.94e-48,114;UBERON:0001950,8.27e-47,20;UBERON:0010371,1.24e-46,104;UBERON:0010314,1.30e-37,132;UBERON:0000125,2.22e-31,9;UBERON:0002308,2.22e-31,9;UBERON:0004121,1.01e-30,171;UBERON:0000924,1.01e-30,171;UBERON:0006601,1.01e-30,171;UBERON:0002298,2.22e-26,6;UBERON:0011216,1.03e-24,223;UBERON:0002420,1.21e-24,9;UBERON:0007245,1.21e-24,9;UBERON:0010009,1.21e-24,9;UBERON:0010011,1.21e-24,9;UBERON:0000454,1.21e-24,9;UBERON:0009663,2.37e-23,7;UBERON:0000025,6.15e-22,192;UBERON:0000200,2.42e-19,6;UBERON:0000369,5.22e-19,4;UBERON:0002435,5.22e-19,4;UBERON:0000204,5.22e-19,4;UBERON:0010082,5.22e-19,4;UBERON:0004111,4.62e-16,240;UBERON:0002021,1.59e-15,5;UBERON:0000349,1.65e-15,5;UBERON:0001872,2.77e-15,5;UBERON:0005383,6.02e-15,3;UBERON:0005382,6.02e-15,3;UBERON:0001896,2.12e-14,3;UBERON:0005290,2.12e-14,3;UBERON:0010096,2.12e-14,3;UBERON:0003076,5.66e-14,15;UBERON:0003057,5.66e-14,15;UBERON:0000988,9.48e-14,3;UBERON:0004733,6.38e-13,12;UBERON:0002028,6.38e-13,12;UBERON:0007277,6.38e-13,12;UBERON:0000483,6.70e-12,306;UBERON:0004732,6.96e-12,13;UBERON:0000119,1.04e-11,309;UBERON:0001871,5.16e-11,6;UBERON:0001873,9.41e-11,2;UBERON:0010122,9.41e-11,2;UBERON:0001954,1.14e-10,2;UBERON:0003022,1.14e-10,2;UBERON:0002421,1.14e-10,2;UBERON:0002600,1.14e-10,2;UBERON:0002771,2.79e-10,2;UBERON:0002148,7.33e-10,2;UBERON:0006331,7.33e-10,2;UBERON:0009662,7.33e-10,2;UBERON:0001870,4.13e-07,3 | |||
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| ||
|short_description=p27@NTRK2 | |||
}} | }} |
Latest revision as of 00:59, 18 September 2015
Short description: | p27@NTRK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_NTRK2_5end |
Coexpression cluster: | C963_mesodermal_hippocampus_amygdala_medulla_thalamus_brain_corpus |
Association with transcript: | -340bp_to_NM_001018065, NM_001018066, uc004aob.1, uc011lsz.1, uc011lta.1_5end |
EntrezGene: | NTRK2 |
HGNC: | 8032 |
UniProt: | Q16620Q59GJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data