FFCP PHASE1:Hg19::chr1:1822495..1822571,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4396 | |||
|TSSclassifier=strong | |||
|UniProt=P62873 | |||
|association_with_transcript=0bp_to_ENST00000378606,ENST00000378609,NM_002074,uc001aif.2,uc009vky.2_5end | |||
|cluster_id=chr1:1822495..1822571,- | |||
|description=CAGE_peak_1_at_GNB1_5end | |||
|id=chr1:1822495..1822571,- | |||
|ontology_enrichment_celltype=CL:0000115!1.51e-10!35;CL:0002078!1.84e-10!44;CL:0000222!1.07e-08!119;CL:1000449!5.54e-08!16;CL:1000497!1.68e-07!18;CL:0002518!1.68e-07!18;CL:0002139!3.68e-07!24;CL:0002681!7.93e-07!13;CL:0002584!7.93e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.59e-09;36!CL:1000449;2.66e-08;15!CL:1000497;9.17e-08;17!CL:0002518;9.17e-08;17!CL:0002139;3.67e-07;24!CL:0002681;3.70e-07;12!CL:0002584;3.70e-07;12!CL:0002078;5.09e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.25e-11,36;CL:0002078,6.69e-11,45;CL:0000222,5.44e-09,121;CL:1000449,2.63e-08,15;CL:1000497,9.32e-08,17;CL:0002518,9.32e-08,17;CL:0002681,3.66e-07,12;CL:0002584,3.66e-07,12;CL:0002139,3.68e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.73e-17!194;UBERON:0000467!1.86e-16!625;UBERON:0000480!4.83e-16!626;UBERON:0004111!8.14e-16!241;UBERON:0000119!1.06e-13!312;UBERON:0002050!1.80e-13!605;UBERON:0005423!1.80e-13!605;UBERON:0000923!1.82e-13!604;UBERON:0005291!1.82e-13!604;UBERON:0006598!1.82e-13!604;UBERON:0002532!1.82e-13!604;UBERON:0000468!3.80e-13!659;UBERON:0000483!4.86e-13!309;UBERON:0000922!1.90e-12!612;UBERON:0000477!2.89e-11!286;UBERON:0003075!5.19e-11!86;UBERON:0007284!5.19e-11!86;UBERON:0002049!8.76e-11!79;UBERON:0007798!8.76e-11!79;UBERON:0001049!1.25e-10!57;UBERON:0005068!1.25e-10!57;UBERON:0006241!1.25e-10!57;UBERON:0007135!1.25e-10!57;UBERON:0000055!1.32e-10!69;UBERON:0003081!1.47e-10!216;UBERON:0002616!6.15e-10!59;UBERON:0001981!9.39e-10!60;UBERON:0007500!9.39e-10!60;UBERON:0004537!9.39e-10!60;UBERON:0006965!9.39e-10!60;UBERON:0001869!1.02e-09!32;UBERON:0001893!1.37e-09!34;UBERON:0002346!1.58e-09!90;UBERON:0004535!2.49e-09!110;UBERON:0002020!3.92e-09!34;UBERON:0003528!3.92e-09!34;UBERON:0002791!4.52e-09!33;UBERON:0003914!6.41e-09!118;UBERON:0002619!6.74e-09!22;UBERON:0002780!6.82e-09!41;UBERON:0001890!6.82e-09!41;UBERON:0006240!6.82e-09!41;UBERON:0005743!6.97e-09!86;UBERON:0001950!7.55e-09!20;UBERON:0001009!8.69e-09!113;UBERON:0000956!8.90e-09!25;UBERON:0000203!8.90e-09!25;UBERON:0003080!1.16e-08!42;UBERON:0001017!1.38e-08!82;UBERON:0004872!1.73e-08!84;UBERON:0000353!1.77e-08!17;UBERON:0000955!2.34e-08!69;UBERON:0006238!2.34e-08!69;UBERON:0003056!2.44e-08!61;UBERON:0000073!5.25e-08!94;UBERON:0001016!5.25e-08!94;UBERON:0004211!5.54e-08!16;UBERON:0001285!5.54e-08!16;UBERON:0007684!5.54e-08!16;UBERON:0003220!5.54e-08!16;UBERON:0004208!5.54e-08!16;UBERON:0000475!6.77e-08!365;UBERON:0000033!1.24e-07!123;UBERON:0004121!1.93e-07!169;UBERON:0001637!2.73e-07!42;UBERON:0003509!2.73e-07!42;UBERON:0004572!2.73e-07!42;UBERON:0006555!4.23e-07!17;UBERON:0005103!4.23e-07!17;UBERON:0000083!4.23e-07!17;UBERON:0009201!4.23e-07!17;UBERON:0004819!4.23e-07!17;UBERON:0006553!4.23e-07!17;UBERON:0003074!4.23e-07!17;UBERON:0003060!4.23e-07!17;UBERON:0001225!7.93e-07!13;UBERON:0008987!7.93e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.59e-09;22!UBERON:0001950;7.43e-09;20!UBERON:0000956;8.60e-09;25!UBERON:0000203;8.60e-09;25!UBERON:0001869;9.67e-09;32!UBERON:0001893;1.29e-08;34!UBERON:0000353;2.62e-08;15!UBERON:0006555;2.66e-08;15!UBERON:0004819;2.66e-08;15!UBERON:0001285;2.66e-08;15!UBERON:0007684;2.66e-08;15!UBERON:0002791;4.49e-08;32!UBERON:0003528;5.00e-08;34!UBERON:0002020;5.00e-08;34!UBERON:0001225;3.70e-07;12!UBERON:0008987;3.70e-07;12!UBERON:0001851;5.97e-07;15!UBERON:0003914;6.46e-07;74 | |||
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| |||
|short_description=p1@GNB1 | |||
}} |
Latest revision as of 00:54, 19 September 2015
Short description: | p1@GNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378606, ENST00000378609, NM_002074, uc001aif.2, uc009vky.2_5end |
EntrezGene: | GNB1 |
HGNC: | 4396 |
UniProt: | P62873 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.25e-11 | 36 |
meso-epithelial cell | 6.69e-11 | 45 |
mesodermal cell | 5.44e-09 | 121 |
epithelial cell of nephron | 2.63e-08 | 15 |
kidney cell | 9.32e-08 | 17 |
kidney epithelial cell | 9.32e-08 | 17 |
kidney cortical cell | 3.66e-07 | 12 |
renal cortical epithelial cell | 3.66e-07 | 12 |
endothelial cell of vascular tree | 3.68e-07 | 24 |