FFCP PHASE1:Hg19::chr10:73848196..73848207,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9806 | |EntrezGene=9806 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |HGNC=13564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000495888_5end | |association_with_transcript=71bp_to_ENST00000495888_5end | ||
|cluster_id=chr10:73848196..73848207,- | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_6_at_SPOCK2_5end | |description=CAGE_peak_6_at_SPOCK2_5end | ||
|id=chr10:73848196..73848207,- | |id=chr10:73848196..73848207,- | ||
|ontology_enrichment_celltype=CL:0000791!8.16e-12!18;CL:0000789!8.16e-12!18;CL:0002420!8.16e-12!18;CL:0002419!8.16e-12!18;CL:0000790!8.16e-12!18;CL:0000084!5.62e-09!25;CL:0000827!5.62e-09!25;CL:0000542!1.63e-08!53;CL:0000051!1.63e-08!53;CL:0000838!4.39e-08!52;CL:0000625!1.67e-07!11;CL:1000507!4.01e-07!12;CL:1000494!4.01e-07!12 | |ontology_enrichment_celltype=CL:0000791!8.16e-12!18;CL:0000789!8.16e-12!18;CL:0002420!8.16e-12!18;CL:0002419!8.16e-12!18;CL:0000790!8.16e-12!18;CL:0000084!5.62e-09!25;CL:0000827!5.62e-09!25;CL:0000542!1.63e-08!53;CL:0000051!1.63e-08!53;CL:0000838!4.39e-08!52;CL:0000625!1.67e-07!11;CL:1000507!4.01e-07!12;CL:1000494!4.01e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;7.41e-14;10!CL:1000494;7.41e-14;10!CL:0000791;4.80e-13;18!CL:0000789;4.80e-13;18!CL:0002419;4.80e-13;18!CL:1000449;1.72e-10;15!CL:0000084;8.34e-10;25!CL:1000497;6.23e-09;17!CL:0002518;6.23e-09;17!CL:0000625;7.78e-08;11!CL:0002681;3.20e-07;12!CL:0002584;3.20e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,9.72e-14,10;CL:1000494,9.72e-14,10;CL:0000791,5.09e-13,18;CL:0000789,5.09e-13,18;CL:0002420,5.09e-13,18;CL:0002419,5.09e-13,18;CL:0000790,5.09e-13,18;CL:1000449,2.07e-10,15;CL:0000084,8.98e-10,25;CL:0000827,8.98e-10,25;CL:1000497,7.30e-09,17;CL:0002518,7.30e-09,17;CL:0000625,8.21e-08,11;CL:0000542,1.12e-07,53;CL:0000051,1.12e-07,53;CL:0002681,3.67e-07,12;CL:0002584,3.67e-07,12;CL:0000838,3.95e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000790;4.80e-13;18!UBERON:0006601;1.93e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.28e-50!115;UBERON:0001049!1.09e-42!57;UBERON:0005068!1.09e-42!57;UBERON:0006241!1.09e-42!57;UBERON:0007135!1.09e-42!57;UBERON:0002616!5.52e-37!59;UBERON:0001017!3.95e-35!82;UBERON:0005743!8.92e-35!86;UBERON:0002780!4.15e-32!41;UBERON:0001890!4.15e-32!41;UBERON:0006240!4.15e-32!41;UBERON:0000955!4.90e-31!69;UBERON:0006238!4.90e-31!69;UBERON:0003080!6.02e-31!42;UBERON:0000073!8.83e-31!94;UBERON:0001016!8.83e-31!94;UBERON:0003075!2.96e-30!86;UBERON:0007284!2.96e-30!86;UBERON:0002346!8.23e-28!90;UBERON:0002020!1.82e-26!34;UBERON:0003528!1.82e-26!34;UBERON:0001893!2.33e-26!34;UBERON:0002791!2.42e-25!33;UBERON:0001869!8.97e-25!32;UBERON:0003056!5.38e-20!61;UBERON:0000956!7.22e-19!25;UBERON:0000203!7.22e-19!25;UBERON:0002619!3.41e-17!22;UBERON:0000153!6.86e-16!129;UBERON:0007811!6.86e-16!129;UBERON:0001950!2.06e-15!20;UBERON:0000033!1.86e-13!123;UBERON:0000025!4.32e-13!194;UBERON:0003076!1.36e-12!15;UBERON:0003057!1.36e-12!15;UBERON:0004121!1.14e-11!169;UBERON:0000924!6.90e-11!173;UBERON:0006601!6.90e-11!173;UBERON:0004733!6.44e-10!12;UBERON:0002028!6.44e-10!12;UBERON:0007277!6.44e-10!12;UBERON:0002308!4.36e-09!9;UBERON:0000125!4.36e-09!9;UBERON:0004732!7.61e-09!13;UBERON:0000477!2.47e-08!286;UBERON:0004111!3.55e-08!241;UBERON:0000200!2.66e-07!6;UBERON:0009663!3.75e-07!7;UBERON:0001894!3.90e-07!7;UBERON:0006222!3.90e-07!7;UBERON:0009773!4.01e-07!12;UBERON:0001231!4.01e-07!12;UBERON:0004810!4.01e-07!12;UBERON:0002680!4.32e-07!9;UBERON:0001895!4.32e-07!9;UBERON:0010092!4.32e-07!9;UBERON:0002298!6.68e-07!8;UBERON:0002420!7.94e-07!9;UBERON:0007245!7.94e-07!9;UBERON:0010009!7.94e-07!9;UBERON:0010011!7.94e-07!9;UBERON:0000454!7.94e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.63e-33;41!UBERON:0001890;2.63e-33;41!UBERON:0000073;4.46e-33;53!UBERON:0002616;4.46e-33;53!UBERON:0003528;3.20e-32;34!UBERON:0002020;3.20e-32;34!UBERON:0001893;4.36e-32;34!UBERON:0001869;3.18e-31;32!UBERON:0002791;6.47e-31;32!UBERON:0000956;6.92e-26;25!UBERON:0000203;6.92e-26;25!UBERON:0002619;3.32e-25;22!UBERON:0001950;2.12e-22;20!UBERON:0000955;2.13e-20;68!UBERON:0001017;9.92e-20;75!UBERON:0001016;2.89e-16;83!UBERON:0004211;7.41e-14;10!UBERON:0009773;7.41e-14;10!UBERON:0001231;7.41e-14;10!UBERON:0004810;7.41e-14;10!UBERON:0000125;1.72e-13;9!UBERON:0002308;1.72e-13;9!UBERON:0007023;1.87e-11;114!UBERON:0004733;3.09e-11;12!UBERON:0002028;3.09e-11;12!UBERON:0002298;4.84e-11;6!UBERON:0000200;1.07e-10;6!UBERON:0001894;1.69e-10;7!UBERON:0006555;1.72e-10;15!UBERON:0004819;1.72e-10;15!UBERON:0001285;1.72e-10;15!UBERON:0007684;1.72e-10;15!UBERON:0009663;2.05e-10;7!UBERON:0002420;3.25e-10;9!UBERON:0007245;3.25e-10;9!UBERON:0010009;3.25e-10;9!UBERON:0010011;3.25e-10;9!UBERON:0000454;3.25e-10;9!UBERON:0004732;3.48e-10;13!UBERON:0000489;6.64e-10;29!UBERON:0001872;8.09e-09;5!UBERON:0002021;2.45e-08;5!UBERON:0002113;7.26e-08;24!UBERON:0011143;7.26e-08;24!UBERON:0001225;3.20e-07;12!UBERON:0008987;3.20e-07;12!UBERON:0002680;4.67e-07;9!UBERON:0001895;4.67e-07;9!UBERON:0000369;4.89e-07;4!UBERON:0002435;4.89e-07;4!UBERON:0000204;4.89e-07;4!UBERON:0001851;7.71e-07;15 | |||
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| ||
|short_description=p6@SPOCK2 | |short_description=p6@SPOCK2 | ||
}} | }} |
Latest revision as of 05:00, 19 September 2015
Short description: | p6@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPOCK2_5end |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | 71bp_to_ENST00000495888_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 9.72e-14 | 10 |
nephron tubule epithelial cell | 9.72e-14 | 10 |
mature alpha-beta T cell | 5.09e-13 | 18 |
alpha-beta T cell | 5.09e-13 | 18 |
immature T cell | 5.09e-13 | 18 |
mature T cell | 5.09e-13 | 18 |
immature alpha-beta T cell | 5.09e-13 | 18 |
epithelial cell of nephron | 2.07e-10 | 15 |
T cell | 8.98e-10 | 25 |
pro-T cell | 8.98e-10 | 25 |
kidney cell | 7.30e-09 | 17 |
kidney epithelial cell | 7.30e-09 | 17 |
CD8-positive, alpha-beta T cell | 8.21e-08 | 11 |
lymphocyte | 1.12e-07 | 53 |
common lymphoid progenitor | 1.12e-07 | 53 |
kidney cortical cell | 3.67e-07 | 12 |
renal cortical epithelial cell | 3.67e-07 | 12 |
lymphoid lineage restricted progenitor cell | 3.95e-07 | 52 |