FFCP PHASE1:Hg19::chr22:37823468..37823528,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114794 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29396 | |||
|TSSclassifier=strong | |||
|UniProt=Q5R3F8 | |||
|association_with_transcript=0bp_to_ENST00000402918,ENST00000415408,ENST00000452946,NM_052906,uc003asq.3_5end | |||
|cluster_id=chr22:37823468..37823528,- | |||
|description=CAGE_peak_1_at_ELFN2_5end | |||
|id=chr22:37823468..37823528,- | |||
|ontology_enrichment_celltype=CL:0000066!2.23e-10!254;CL:0000077!2.98e-08!19;CL:1000497!4.69e-08!18;CL:0002518!4.69e-08!18;CL:1000449!5.95e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.10e-10;17!CL:0002518;1.10e-10;17!CL:1000449;4.04e-09;15!CL:0000077;2.29e-08;19!CL:0002681;2.76e-07;12!CL:0002584;2.76e-07;12!CL:1000507;4.80e-07;10!CL:1000494;4.80e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.44e-10,17;CL:0002518,1.44e-10,17;CL:1000449,5.26e-09,15;CL:0000077,1.42e-08,19;CL:0000066,1.74e-07,253;CL:0002681,2.96e-07,12;CL:0002584,2.96e-07,12;CL:1000507,6.09e-07,10;CL:1000494,6.09e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.56e-07;82 | |||
|ontology_enrichment_disease=DOID:305!3.00e-08!106;DOID:0050687!5.58e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.03e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-24!57;UBERON:0005068!1.78e-24!57;UBERON:0006241!1.78e-24!57;UBERON:0007135!1.78e-24!57;UBERON:0005743!6.56e-24!86;UBERON:0000955!1.21e-23!69;UBERON:0006238!1.21e-23!69;UBERON:0001017!3.93e-23!82;UBERON:0000475!1.33e-22!365;UBERON:0003075!1.94e-22!86;UBERON:0007284!1.94e-22!86;UBERON:0002346!2.13e-20!90;UBERON:0002780!2.84e-20!41;UBERON:0001890!2.84e-20!41;UBERON:0006240!2.84e-20!41;UBERON:0002616!3.39e-20!59;UBERON:0002020!2.60e-19!34;UBERON:0003528!2.60e-19!34;UBERON:0003080!2.71e-19!42;UBERON:0000073!2.83e-19!94;UBERON:0001016!2.83e-19!94;UBERON:0001893!3.68e-19!34;UBERON:0002791!1.73e-18!33;UBERON:0001869!2.22e-18!32;UBERON:0000119!2.61e-18!312;UBERON:0000483!3.15e-18!309;UBERON:0000062!3.24e-18!511;UBERON:0003056!8.74e-18!61;UBERON:0000033!5.34e-17!123;UBERON:0000481!6.51e-17!347;UBERON:0000153!1.98e-16!129;UBERON:0007811!1.98e-16!129;UBERON:0002619!3.00e-16!22;UBERON:0001950!9.37e-15!20;UBERON:0000956!4.12e-14!25;UBERON:0000203!4.12e-14!25;UBERON:0004111!4.13e-14!241;UBERON:0000477!7.26e-14!286;UBERON:0000064!7.61e-14!219;UBERON:0000025!4.35e-13!194;UBERON:0004121!1.24e-12!169;UBERON:0000924!9.45e-12!173;UBERON:0006601!9.45e-12!173;UBERON:0000467!1.41e-10!625;UBERON:0000480!2.09e-10!626;UBERON:0003064!4.60e-10!37;UBERON:0000922!1.50e-09!612;UBERON:0000468!1.89e-09!659;UBERON:0002050!2.14e-09!605;UBERON:0005423!2.14e-09!605;UBERON:0000923!2.65e-09!604;UBERON:0005291!2.65e-09!604;UBERON:0006598!2.65e-09!604;UBERON:0002532!2.65e-09!604;UBERON:0001008!5.39e-09!45;UBERON:0006554!6.66e-09!44;UBERON:0007023!6.48e-08!115;UBERON:0000489!1.85e-07!32;UBERON:0000058!5.91e-07!26;UBERON:0004211!5.95e-07!16;UBERON:0001285!5.95e-07!16;UBERON:0007684!5.95e-07!16;UBERON:0003220!5.95e-07!16;UBERON:0004208!5.95e-07!16;UBERON:0002420!6.61e-07!9;UBERON:0007245!6.61e-07!9;UBERON:0010009!6.61e-07!9;UBERON:0010011!6.61e-07!9;UBERON:0000454!6.61e-07!9;UBERON:0006555!9.89e-07!17;UBERON:0005103!9.89e-07!17;UBERON:0000083!9.89e-07!17;UBERON:0009201!9.89e-07!17;UBERON:0004819!9.89e-07!17;UBERON:0006553!9.89e-07!17;UBERON:0003074!9.89e-07!17;UBERON:0003060!9.89e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.09e-23;22!UBERON:0003528;1.96e-22;34!UBERON:0002020;1.96e-22;34!UBERON:0001893;2.23e-22;34!UBERON:0001869;2.41e-22;32!UBERON:0002791;5.50e-22;32!UBERON:0001950;1.07e-20;20!UBERON:0002780;1.66e-20;41!UBERON:0001890;1.66e-20;41!UBERON:0000956;4.85e-19;25!UBERON:0000203;4.85e-19;25!UBERON:0000073;4.61e-17;53!UBERON:0002616;4.61e-17;53!UBERON:0000955;8.98e-14;68!UBERON:0001017;3.63e-13;75!UBERON:0001016;3.72e-10;83!UBERON:0002420;3.26e-09;9!UBERON:0007245;3.26e-09;9!UBERON:0010009;3.26e-09;9!UBERON:0010011;3.26e-09;9!UBERON:0000454;3.26e-09;9!UBERON:0006555;4.04e-09;15!UBERON:0004819;4.04e-09;15!UBERON:0001285;4.04e-09;15!UBERON:0007684;4.04e-09;15!UBERON:0000489;4.76e-09;29!UBERON:0000125;6.46e-09;9!UBERON:0002308;6.46e-09;9!UBERON:0002113;4.34e-08;24!UBERON:0011143;4.34e-08;24!UBERON:0001851;7.01e-08;15!UBERON:0000200;1.10e-07;6!UBERON:0001225;2.76e-07;12!UBERON:0008987;2.76e-07;12!UBERON:0009663;4.08e-07;7!UBERON:0004211;4.80e-07;10!UBERON:0009773;4.80e-07;10!UBERON:0001231;4.80e-07;10!UBERON:0004810;4.80e-07;10!UBERON:0000349;8.39e-07;5!UBERON:0002021;9.53e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.37e-33,56;UBERON:0005068,3.37e-33,56;UBERON:0006241,3.37e-33,56;UBERON:0007135,3.37e-33,56;UBERON:0001017,1.40e-31,81;UBERON:0000955,2.87e-31,68;UBERON:0006238,2.87e-31,68;UBERON:0000073,1.19e-30,53;UBERON:0002616,1.19e-30,53;UBERON:0002780,1.58e-28,41;UBERON:0001890,1.58e-28,41;UBERON:0003080,1.58e-28,41;UBERON:0006240,1.58e-28,41;UBERON:0001016,4.60e-27,89;UBERON:0003528,2.22e-26,34;UBERON:0002020,2.22e-26,34;UBERON:0001893,3.62e-26,34;UBERON:0001869,4.65e-25,32;UBERON:0002791,1.47e-24,32;UBERON:0003075,7.58e-24,82;UBERON:0007284,7.58e-24,82;UBERON:0002619,8.59e-23,22;UBERON:0003056,4.57e-22,61;UBERON:0002346,8.65e-22,86;UBERON:0001950,1.14e-20,20;UBERON:0010371,6.03e-20,104;UBERON:0011216,6.64e-20,223;UBERON:0000956,5.09e-19,25;UBERON:0000203,5.09e-19,25;UBERON:0010314,2.21e-15,132;UBERON:0004121,4.85e-14,171;UBERON:0000924,4.85e-14,171;UBERON:0006601,4.85e-14,171;UBERON:0004111,6.75e-14,240;UBERON:0000025,8.89e-14,192;UBERON:0000483,2.12e-13,306;UBERON:0000119,6.08e-13,309;UBERON:0002420,3.97e-09,9;UBERON:0007245,3.97e-09,9;UBERON:0010009,3.97e-09,9;UBERON:0010011,3.97e-09,9;UBERON:0000454,3.97e-09,9;UBERON:0004211,5.26e-09,15;UBERON:0009773,5.26e-09,15;UBERON:0001231,5.26e-09,15;UBERON:0001285,5.26e-09,15;UBERON:0007684,5.26e-09,15;UBERON:0004208,5.26e-09,15;UBERON:0007023,5.46e-09,114;UBERON:0000125,7.94e-09,9;UBERON:0002308,7.94e-09,9;UBERON:0006555,3.49e-08,16;UBERON:0004819,3.49e-08,16;UBERON:0000489,5.42e-08,31;UBERON:0001851,7.09e-08,15;UBERON:0000200,1.10e-07,6;UBERON:0001225,2.96e-07,12;UBERON:0008987,2.96e-07,12;UBERON:0006554,3.11e-07,47;UBERON:0009663,4.91e-07,7;UBERON:0002113,5.18e-07,26;UBERON:0003918,5.18e-07,26;UBERON:0011143,5.18e-07,26;UBERON:0005095,5.18e-07,26;UBERON:0007687,5.18e-07,26;UBERON:0004810,6.09e-07,10;UBERON:0001008,6.31e-07,48;UBERON:0000349,8.29e-07,5;UBERON:0002021,9.58e-07,5 | |||
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| |||
|short_description=p1@ELFN2 | |||
}} |
Latest revision as of 05:03, 20 September 2015
Short description: | p1@ELFN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELFN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000402918, ENST00000415408, ENST00000452946, NM_052906, uc003asq.3_5end |
EntrezGene: | ELFN2 |
HGNC: | 29396 |
UniProt: | Q5R3F8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.44e-10 | 17 |
kidney epithelial cell | 1.44e-10 | 17 |
epithelial cell of nephron | 5.26e-09 | 15 |
mesothelial cell | 1.42e-08 | 19 |
epithelial cell | 1.74e-07 | 253 |
kidney cortical cell | 2.96e-07 | 12 |
renal cortical epithelial cell | 2.96e-07 | 12 |
kidney tubule cell | 6.09e-07 | 10 |
nephron tubule epithelial cell | 6.09e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.03e-07 | 106 |