FFCP PHASE1:Hg19::chr1:44482876..44482891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6536 | |EntrezGene=6536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |HGNC=11056 | ||
|TSSclassifier=strong | |||
|UniProt=P48067 | |UniProt=P48067 | ||
|association_with_transcript=105bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | |association_with_transcript=105bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | ||
|cluster_id=chr1:44482876..44482891,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_SLC6A9_5end | |description=CAGE_peak_9_at_SLC6A9_5end | ||
|id=chr1:44482876..44482891,- | |id=chr1:44482876..44482891,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.69e-12;82!UBERON:0006241;1.84e-11;3!UBERON:0003057;1.84e-11;3!UBERON:0003056;2.09e-11;3!UBERON:0005425;1.60e-09;1!UBERON:0006222;2.60e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@SLC6A9 | |short_description=p9@SLC6A9 | ||
}} | }} |
Latest revision as of 05:43, 18 September 2015
Short description: | p9@SLC6A9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC6A9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 105bp_to_ENST00000357730, ENST00000360584, NM_006934, NM_201649, uc001cll.2, uc001clm.2, uc009vxd.2, uc010okn.1_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | P48067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data