FFCP PHASE1:Hg19::chr22:30970588..30970622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9514 | |EntrezGene=9514 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24240 | |HGNC=24240 | ||
|TSSclassifier=strong | |||
|UniProt=Q99999 | |UniProt=Q99999 | ||
|association_with_transcript=-14bp_to_ENST00000406361_5end | |association_with_transcript=-14bp_to_ENST00000406361_5end | ||
|cluster_id=chr22:30970588..30970622,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_GAL3ST1_5end | |description=CAGE_peak_3_at_GAL3ST1_5end | ||
|id=chr22:30970588..30970622,- | |id=chr22:30970588..30970622,- | ||
|ontology_enrichment_celltype=CL:1000507!5.00e-08!12;CL:1000494!5.00e-08!12;CL:1000497!2.31e-07!18;CL:0002518!2.31e-07!18;CL:1000449!5.78e-07!16 | |ontology_enrichment_celltype=CL:1000507!5.00e-08!12;CL:1000494!5.00e-08!12;CL:1000497!2.31e-07!18;CL:0002518!2.31e-07!18;CL:1000449!5.78e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:1000497;7.62e-08;17!CL:0002518;7.62e-08;17!CL:1000507;1.96e-07;10!CL:1000494;1.96e-07;10!CL:0000650;4.37e-07;2!CL:1000500;4.37e-07;2!CL:1000618;4.37e-07;2!CL:1001318;4.37e-07;2!CL:0002173;4.37e-07;2!CL:1000449;9.87e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,7.55e-08,17;CL:0002518,7.55e-08,17;CL:1000507,1.75e-07,10;CL:1000494,1.75e-07,10;CL:0000650,3.59e-07,2;CL:1000500,3.59e-07,2;CL:1000618,3.59e-07,2;CL:1001318,3.59e-07,2;CL:0002173,3.59e-07,2;CL:1000449,9.52e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.79e-10;82!UBERON:0006241;2.30e-10;3!UBERON:0003057;2.30e-10;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.68e-41!57;UBERON:0005068!5.68e-41!57;UBERON:0006241!5.68e-41!57;UBERON:0007135!5.68e-41!57;UBERON:0005743!1.04e-36!86;UBERON:0001017!2.55e-36!82;UBERON:0002616!6.15e-36!59;UBERON:0007023!9.00e-36!115;UBERON:0000073!1.98e-34!94;UBERON:0001016!1.98e-34!94;UBERON:0000955!2.54e-33!69;UBERON:0006238!2.54e-33!69;UBERON:0003075!5.70e-31!86;UBERON:0007284!5.70e-31!86;UBERON:0002780!1.12e-30!41;UBERON:0001890!1.12e-30!41;UBERON:0006240!1.12e-30!41;UBERON:0003080!1.10e-29!42;UBERON:0001893!5.22e-29!34;UBERON:0002020!5.34e-29!34;UBERON:0003528!5.34e-29!34;UBERON:0002346!8.00e-29!90;UBERON:0002791!1.09e-27!33;UBERON:0001869!3.34e-26!32;UBERON:0000025!1.24e-22!194;UBERON:0001950!4.18e-21!20;UBERON:0002619!4.31e-21!22;UBERON:0003056!9.48e-21!61;UBERON:0004111!3.59e-18!241;UBERON:0000956!7.18e-18!25;UBERON:0000203!7.18e-18!25;UBERON:0000483!8.79e-16!309;UBERON:0000481!1.35e-15!347;UBERON:0000153!1.61e-15!129;UBERON:0007811!1.61e-15!129;UBERON:0000033!1.64e-15!123;UBERON:0000119!2.23e-15!312;UBERON:0000477!6.71e-15!286;UBERON:0004121!6.81e-15!169;UBERON:0000475!3.06e-14!365;UBERON:0000924!3.83e-14!173;UBERON:0006601!3.83e-14!173;UBERON:0002308!2.42e-13!9;UBERON:0000125!2.42e-13!9;UBERON:0002420!6.81e-13!9;UBERON:0007245!6.81e-13!9;UBERON:0010009!6.81e-13!9;UBERON:0010011!6.81e-13!9;UBERON:0000454!6.81e-13!9;UBERON:0000489!2.58e-12!32;UBERON:0003076!3.55e-12!15;UBERON:0003057!3.55e-12!15;UBERON:0000064!8.83e-12!219;UBERON:0000062!2.10e-11!511;UBERON:0005172!1.29e-10!55;UBERON:0005173!1.29e-10!55;UBERON:0009663!1.67e-10!7;UBERON:0004732!1.01e-09!13;UBERON:0002298!1.25e-09!8;UBERON:0005177!2.88e-09!107;UBERON:0002113!3.29e-09!27;UBERON:0003918!3.29e-09!27;UBERON:0005095!3.29e-09!27;UBERON:0007687!3.29e-09!27;UBERON:0002417!7.85e-09!61;UBERON:0000916!7.85e-09!61;UBERON:0000200!8.55e-09!6;UBERON:0004876!1.09e-08!20;UBERON:0001871!1.17e-08!7;UBERON:0000922!1.18e-08!612;UBERON:0000080!1.67e-08!18;UBERON:0002120!1.67e-08!18;UBERON:0004875!1.67e-08!18;UBERON:0005721!1.67e-08!18;UBERON:0005754!1.67e-08!18;UBERON:0007297!1.67e-08!18;UBERON:0004733!1.99e-08!12;UBERON:0002028!1.99e-08!12;UBERON:0007277!1.99e-08!12;UBERON:0009773!5.00e-08!12;UBERON:0001231!5.00e-08!12;UBERON:0004810!5.00e-08!12;UBERON:0003064!8.62e-08!37;UBERON:0006555!1.02e-07!17;UBERON:0005103!1.02e-07!17;UBERON:0000083!1.02e-07!17;UBERON:0009201!1.02e-07!17;UBERON:0004819!1.02e-07!17;UBERON:0006553!1.02e-07!17;UBERON:0003074!1.02e-07!17;UBERON:0003060!1.02e-07!17;UBERON:0006554!1.27e-07!44;UBERON:0001872!1.90e-07!5;UBERON:0001008!2.46e-07!45;UBERON:0004211!5.78e-07!16;UBERON:0001285!5.78e-07!16;UBERON:0007684!5.78e-07!16;UBERON:0003220!5.78e-07!16;UBERON:0004208!5.78e-07!16;UBERON:0003887!7.46e-07!21 | |ontology_enrichment_uberon=UBERON:0001049!5.68e-41!57;UBERON:0005068!5.68e-41!57;UBERON:0006241!5.68e-41!57;UBERON:0007135!5.68e-41!57;UBERON:0005743!1.04e-36!86;UBERON:0001017!2.55e-36!82;UBERON:0002616!6.15e-36!59;UBERON:0007023!9.00e-36!115;UBERON:0000073!1.98e-34!94;UBERON:0001016!1.98e-34!94;UBERON:0000955!2.54e-33!69;UBERON:0006238!2.54e-33!69;UBERON:0003075!5.70e-31!86;UBERON:0007284!5.70e-31!86;UBERON:0002780!1.12e-30!41;UBERON:0001890!1.12e-30!41;UBERON:0006240!1.12e-30!41;UBERON:0003080!1.10e-29!42;UBERON:0001893!5.22e-29!34;UBERON:0002020!5.34e-29!34;UBERON:0003528!5.34e-29!34;UBERON:0002346!8.00e-29!90;UBERON:0002791!1.09e-27!33;UBERON:0001869!3.34e-26!32;UBERON:0000025!1.24e-22!194;UBERON:0001950!4.18e-21!20;UBERON:0002619!4.31e-21!22;UBERON:0003056!9.48e-21!61;UBERON:0004111!3.59e-18!241;UBERON:0000956!7.18e-18!25;UBERON:0000203!7.18e-18!25;UBERON:0000483!8.79e-16!309;UBERON:0000481!1.35e-15!347;UBERON:0000153!1.61e-15!129;UBERON:0007811!1.61e-15!129;UBERON:0000033!1.64e-15!123;UBERON:0000119!2.23e-15!312;UBERON:0000477!6.71e-15!286;UBERON:0004121!6.81e-15!169;UBERON:0000475!3.06e-14!365;UBERON:0000924!3.83e-14!173;UBERON:0006601!3.83e-14!173;UBERON:0002308!2.42e-13!9;UBERON:0000125!2.42e-13!9;UBERON:0002420!6.81e-13!9;UBERON:0007245!6.81e-13!9;UBERON:0010009!6.81e-13!9;UBERON:0010011!6.81e-13!9;UBERON:0000454!6.81e-13!9;UBERON:0000489!2.58e-12!32;UBERON:0003076!3.55e-12!15;UBERON:0003057!3.55e-12!15;UBERON:0000064!8.83e-12!219;UBERON:0000062!2.10e-11!511;UBERON:0005172!1.29e-10!55;UBERON:0005173!1.29e-10!55;UBERON:0009663!1.67e-10!7;UBERON:0004732!1.01e-09!13;UBERON:0002298!1.25e-09!8;UBERON:0005177!2.88e-09!107;UBERON:0002113!3.29e-09!27;UBERON:0003918!3.29e-09!27;UBERON:0005095!3.29e-09!27;UBERON:0007687!3.29e-09!27;UBERON:0002417!7.85e-09!61;UBERON:0000916!7.85e-09!61;UBERON:0000200!8.55e-09!6;UBERON:0004876!1.09e-08!20;UBERON:0001871!1.17e-08!7;UBERON:0000922!1.18e-08!612;UBERON:0000080!1.67e-08!18;UBERON:0002120!1.67e-08!18;UBERON:0004875!1.67e-08!18;UBERON:0005721!1.67e-08!18;UBERON:0005754!1.67e-08!18;UBERON:0007297!1.67e-08!18;UBERON:0004733!1.99e-08!12;UBERON:0002028!1.99e-08!12;UBERON:0007277!1.99e-08!12;UBERON:0009773!5.00e-08!12;UBERON:0001231!5.00e-08!12;UBERON:0004810!5.00e-08!12;UBERON:0003064!8.62e-08!37;UBERON:0006555!1.02e-07!17;UBERON:0005103!1.02e-07!17;UBERON:0000083!1.02e-07!17;UBERON:0009201!1.02e-07!17;UBERON:0004819!1.02e-07!17;UBERON:0006553!1.02e-07!17;UBERON:0003074!1.02e-07!17;UBERON:0003060!1.02e-07!17;UBERON:0006554!1.27e-07!44;UBERON:0001872!1.90e-07!5;UBERON:0001008!2.46e-07!45;UBERON:0004211!5.78e-07!16;UBERON:0001285!5.78e-07!16;UBERON:0007684!5.78e-07!16;UBERON:0003220!5.78e-07!16;UBERON:0004208!5.78e-07!16;UBERON:0003887!7.46e-07!21 | ||
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|short_description=p3@GAL3ST1 | |short_description=p3@GAL3ST1 | ||
}} | }} |
Latest revision as of 18:31, 19 September 2015
Short description: | p3@GAL3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAL3ST1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -14bp_to_ENST00000406361_5end |
EntrezGene: | GAL3ST1 |
HGNC: | 24240 |
UniProt: | Q99999 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 7.55e-08 | 17 |
kidney epithelial cell | 7.55e-08 | 17 |
kidney tubule cell | 1.75e-07 | 10 |
nephron tubule epithelial cell | 1.75e-07 | 10 |
mesangial cell | 3.59e-07 | 2 |
kidney interstitial cell | 3.59e-07 | 2 |
juxtaglomerular complex cell | 3.59e-07 | 2 |
renal interstitial pericyte | 3.59e-07 | 2 |
extraglomerular mesangial cell | 3.59e-07 | 2 |
epithelial cell of nephron | 9.52e-07 | 15 |