FFCP PHASE1:Hg19::chr5:161275542..161275580,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2554 | |EntrezGene=2554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4075 | |HGNC=4075 | ||
|TSSclassifier=strong | |||
|UniProt=P14867 | |UniProt=P14867 | ||
|association_with_transcript=0bp_to_NM_001127645,uc003lyx.3_5end | |association_with_transcript=0bp_to_NM_001127645,uc003lyx.3_5end | ||
|cluster_id=chr5:161275542..161275580,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_GABRA1_5end | |description=CAGE_peak_5_at_GABRA1_5end | ||
|id=chr5:161275542..161275580,+ | |id=chr5:161275542..161275580,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.60e-23;82!UBERON:0006215;5.02e-14;3!UBERON:0010122;7.40e-09;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.91e-103!57;UBERON:0005068!2.91e-103!57;UBERON:0006241!2.91e-103!57;UBERON:0007135!2.91e-103!57;UBERON:0002616!6.77e-91!59;UBERON:0001017!3.92e-87!82;UBERON:0000955!6.52e-86!69;UBERON:0006238!6.52e-86!69;UBERON:0005743!8.67e-86!86;UBERON:0002780!1.51e-80!41;UBERON:0001890!1.51e-80!41;UBERON:0006240!1.51e-80!41;UBERON:0003080!1.99e-78!42;UBERON:0003075!1.17e-76!86;UBERON:0007284!1.17e-76!86;UBERON:0000073!1.63e-76!94;UBERON:0001016!1.63e-76!94;UBERON:0002346!1.10e-72!90;UBERON:0001893!3.57e-72!34;UBERON:0002020!5.75e-72!34;UBERON:0003528!5.75e-72!34;UBERON:0002791!2.61e-69!33;UBERON:0001869!1.72e-67!32;UBERON:0007023!1.42e-64!115;UBERON:0003056!3.64e-57!61;UBERON:0002619!4.91e-57!22;UBERON:0001950!7.04e-52!20;UBERON:0000153!1.51e-50!129;UBERON:0007811!1.51e-50!129;UBERON:0000956!1.08e-49!25;UBERON:0000203!1.08e-49!25;UBERON:0000033!2.07e-49!123;UBERON:0004121!3.24e-40!169;UBERON:0000924!5.63e-39!173;UBERON:0006601!5.63e-39!173;UBERON:0003076!1.82e-24!15;UBERON:0003057!1.82e-24!15;UBERON:0000025!4.36e-24!194;UBERON:0002420!1.14e-23!9;UBERON:0007245!1.14e-23!9;UBERON:0010009!1.14e-23!9;UBERON:0010011!1.14e-23!9;UBERON:0000454!1.14e-23!9;UBERON:0002308!1.91e-23!9;UBERON:0000125!1.91e-23!9;UBERON:0009663!1.67e-18!7;UBERON:0000200!4.10e-18!6;UBERON:0004733!6.82e-18!12;UBERON:0002028!6.82e-18!12;UBERON:0007277!6.82e-18!12;UBERON:0004111!7.68e-18!241;UBERON:0000483!1.54e-17!309;UBERON:0000119!3.10e-17!312;UBERON:0001871!3.67e-17!7;UBERON:0000477!2.09e-16!286;UBERON:0004732!2.27e-16!13;UBERON:0002298!6.37e-16!8;UBERON:0000064!2.02e-15!219;UBERON:0002021!5.35e-15!5;UBERON:0001872!9.98e-15!5;UBERON:0000349!1.56e-14!5;UBERON:0000475!3.16e-14!365;UBERON:0000369!1.42e-11!4;UBERON:0002435!1.42e-11!4;UBERON:0000204!1.42e-11!4;UBERON:0010082!1.42e-11!4;UBERON:0002680!2.57e-11!9;UBERON:0001895!2.57e-11!9;UBERON:0010092!2.57e-11!9;UBERON:0000062!3.06e-11!511;UBERON:0001894!5.74e-10!7;UBERON:0006222!5.74e-10!7;UBERON:0002771!8.94e-10!3;UBERON:0000481!1.42e-09!347;UBERON:0000988!4.23e-09!3;UBERON:0005383!5.89e-09!3;UBERON:0005382!5.89e-09!3;UBERON:0001896!7.95e-09!3;UBERON:0005290!7.95e-09!3;UBERON:0010096!7.95e-09!3;UBERON:0006331!9.11e-09!3;UBERON:0002240!1.60e-08!3;UBERON:0001870!2.11e-07!2;UBERON:0001876!7.44e-07!2;UBERON:0000922!9.79e-07!612 | |ontology_enrichment_uberon=UBERON:0001049!2.91e-103!57;UBERON:0005068!2.91e-103!57;UBERON:0006241!2.91e-103!57;UBERON:0007135!2.91e-103!57;UBERON:0002616!6.77e-91!59;UBERON:0001017!3.92e-87!82;UBERON:0000955!6.52e-86!69;UBERON:0006238!6.52e-86!69;UBERON:0005743!8.67e-86!86;UBERON:0002780!1.51e-80!41;UBERON:0001890!1.51e-80!41;UBERON:0006240!1.51e-80!41;UBERON:0003080!1.99e-78!42;UBERON:0003075!1.17e-76!86;UBERON:0007284!1.17e-76!86;UBERON:0000073!1.63e-76!94;UBERON:0001016!1.63e-76!94;UBERON:0002346!1.10e-72!90;UBERON:0001893!3.57e-72!34;UBERON:0002020!5.75e-72!34;UBERON:0003528!5.75e-72!34;UBERON:0002791!2.61e-69!33;UBERON:0001869!1.72e-67!32;UBERON:0007023!1.42e-64!115;UBERON:0003056!3.64e-57!61;UBERON:0002619!4.91e-57!22;UBERON:0001950!7.04e-52!20;UBERON:0000153!1.51e-50!129;UBERON:0007811!1.51e-50!129;UBERON:0000956!1.08e-49!25;UBERON:0000203!1.08e-49!25;UBERON:0000033!2.07e-49!123;UBERON:0004121!3.24e-40!169;UBERON:0000924!5.63e-39!173;UBERON:0006601!5.63e-39!173;UBERON:0003076!1.82e-24!15;UBERON:0003057!1.82e-24!15;UBERON:0000025!4.36e-24!194;UBERON:0002420!1.14e-23!9;UBERON:0007245!1.14e-23!9;UBERON:0010009!1.14e-23!9;UBERON:0010011!1.14e-23!9;UBERON:0000454!1.14e-23!9;UBERON:0002308!1.91e-23!9;UBERON:0000125!1.91e-23!9;UBERON:0009663!1.67e-18!7;UBERON:0000200!4.10e-18!6;UBERON:0004733!6.82e-18!12;UBERON:0002028!6.82e-18!12;UBERON:0007277!6.82e-18!12;UBERON:0004111!7.68e-18!241;UBERON:0000483!1.54e-17!309;UBERON:0000119!3.10e-17!312;UBERON:0001871!3.67e-17!7;UBERON:0000477!2.09e-16!286;UBERON:0004732!2.27e-16!13;UBERON:0002298!6.37e-16!8;UBERON:0000064!2.02e-15!219;UBERON:0002021!5.35e-15!5;UBERON:0001872!9.98e-15!5;UBERON:0000349!1.56e-14!5;UBERON:0000475!3.16e-14!365;UBERON:0000369!1.42e-11!4;UBERON:0002435!1.42e-11!4;UBERON:0000204!1.42e-11!4;UBERON:0010082!1.42e-11!4;UBERON:0002680!2.57e-11!9;UBERON:0001895!2.57e-11!9;UBERON:0010092!2.57e-11!9;UBERON:0000062!3.06e-11!511;UBERON:0001894!5.74e-10!7;UBERON:0006222!5.74e-10!7;UBERON:0002771!8.94e-10!3;UBERON:0000481!1.42e-09!347;UBERON:0000988!4.23e-09!3;UBERON:0005383!5.89e-09!3;UBERON:0005382!5.89e-09!3;UBERON:0001896!7.95e-09!3;UBERON:0005290!7.95e-09!3;UBERON:0010096!7.95e-09!3;UBERON:0006331!9.11e-09!3;UBERON:0002240!1.60e-08!3;UBERON:0001870!2.11e-07!2;UBERON:0001876!7.44e-07!2;UBERON:0000922!9.79e-07!612 | ||
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|short_description=p5@GABRA1 | |short_description=p5@GABRA1 | ||
}} | }} |
Latest revision as of 17:24, 16 September 2015
Short description: | p5@GABRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GABRA1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001127645, uc003lyx.3_5end |
EntrezGene: | GABRA1 |
HGNC: | 4075 |
UniProt: | P14867 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data