FFCP PHASE1:Hg19::chr2:242498138..242498179,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:242498138..242498179,+
|short_description=p1@BOK
|description=CAGE_peak_1_at_BOK_5end
|association_with_transcript=0bp_to_NM_032515_5end
|EntrezGene=666
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=666 | |EntrezGene=666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1087 | |HGNC=1087 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UMX3 | |UniProt=Q9UMX3 | ||
|association_with_transcript=0bp_to_NM_032515_5end | |||
|cluster_id=chr2:242498138..242498179,+ | |||
|coexpression_cluster_id=C4213 | |||
|description=CAGE_peak_1_at_BOK_5end | |||
|id=chr2:242498138..242498179,+ | |||
|ontology_enrichment_celltype=CL:0000220!3.09e-22!246;CL:0002321!3.40e-22!248;CL:0000222!6.94e-19!119;CL:0000066!2.31e-16!254;CL:0002078!5.22e-11!44;CL:0002139!1.25e-10!24;CL:0000115!1.76e-10!35;CL:0000213!3.07e-10!57;CL:0000215!3.07e-10!57;CL:0000183!5.61e-09!59;CL:1000449!5.71e-09!16;CL:0000055!5.75e-09!180;CL:0000071!2.68e-08!18;CL:0002546!2.68e-08!18;CL:0000680!1.44e-07!57;CL:0000056!1.44e-07!57;CL:0000355!1.44e-07!57;CL:0002681!1.59e-07!13;CL:0002584!1.59e-07!13;CL:0000187!2.85e-07!54;CL:1000497!3.03e-07!18;CL:0002518!3.03e-07!18;CL:0000076!3.39e-07!62;CL:1000507!7.00e-07!12;CL:1000494!7.00e-07!12;CL:0000393!9.57e-07!60;CL:0000211!9.57e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.15e-10;24!CL:0000115;2.30e-09;36!CL:1000449;6.36e-09;15!CL:0000071;2.49e-08;18!CL:0002078;3.61e-08;45!CL:0002681;1.81e-07;12!CL:0002584;1.81e-07;12!CL:1000497;4.28e-07;17!CL:0002518;4.28e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.02e-23,250;CL:0000222,1.27e-19,121;CL:0000066,3.65e-16,253;CL:0002078,1.60e-11,45;CL:0000115,5.23e-11,36;CL:0000213,1.04e-10,58;CL:0000215,1.04e-10,58;CL:0002139,1.14e-10,24;CL:1000449,6.50e-09,15;CL:0000071,2.49e-08,18;CL:0002546,2.49e-08,18;CL:0000680,9.13e-08,58;CL:0000056,9.13e-08,58;CL:0000355,9.13e-08,58;CL:0000187,1.81e-07,55;CL:0002681,1.84e-07,12;CL:0002584,1.84e-07,12;CL:1000497,3.99e-07,17;CL:0002518,3.99e-07,17;CL:0000076,4.98e-07,63;CL:0000393,6.19e-07,61;CL:0000211,6.19e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;2.49e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@BOK | |||
}} | }} |
Latest revision as of 10:46, 16 September 2015
Short description: | p1@BOK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BOK_5end |
Coexpression cluster: | C4213_Placental_Alveolar_Mesenchymal_Endothelial_substantia_optic_Adipocyte |
Association with transcript: | 0bp_to_NM_032515_5end |
EntrezGene: | BOK |
HGNC: | 1087 |
UniProt: | Q9UMX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.02e-23 | 250 |
mesodermal cell | 1.27e-19 | 121 |
epithelial cell | 3.65e-16 | 253 |
meso-epithelial cell | 1.60e-11 | 45 |
endothelial cell | 5.23e-11 | 36 |
lining cell | 1.04e-10 | 58 |
barrier cell | 1.04e-10 | 58 |
endothelial cell of vascular tree | 1.14e-10 | 24 |
epithelial cell of nephron | 6.50e-09 | 15 |
blood vessel endothelial cell | 2.49e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.49e-08 | 18 |
muscle precursor cell | 9.13e-08 | 58 |
myoblast | 9.13e-08 | 58 |
multi-potent skeletal muscle stem cell | 9.13e-08 | 58 |
muscle cell | 1.81e-07 | 55 |
kidney cortical cell | 1.84e-07 | 12 |
renal cortical epithelial cell | 1.84e-07 | 12 |
kidney cell | 3.99e-07 | 17 |
kidney epithelial cell | 3.99e-07 | 17 |
squamous epithelial cell | 4.98e-07 | 63 |
electrically responsive cell | 6.19e-07 | 61 |
electrically active cell | 6.19e-07 | 61 |