FFCP PHASE1:Hg19::chr10:102790852..102790909,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79955 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26257 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H5P4 | |||
|association_with_transcript=0bp_to_ENST00000370215,ENST00000393462,ENST00000470414,ENST00000474125,uc001ksn.2,uc001kso.1_5end | |||
|cluster_id=chr10:102790852..102790909,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_PDZD7_5end | |||
|id=chr10:102790852..102790909,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.94e-08;15!CL:1000507;7.59e-08;10!CL:1000494;7.59e-08;10!CL:1000497;2.02e-07;17!CL:0002518;2.02e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,9.57e-08,10;CL:1000494,9.57e-08,10;CL:1000449,1.17e-07,15;CL:1000497,3.91e-07,17;CL:0002518,3.91e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.87e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.63e-28!86;UBERON:0000073!8.28e-28!94;UBERON:0001016!8.28e-28!94;UBERON:0001049!4.34e-27!57;UBERON:0005068!4.34e-27!57;UBERON:0006241!4.34e-27!57;UBERON:0007135!4.34e-27!57;UBERON:0001017!9.77e-27!82;UBERON:0003075!3.89e-24!86;UBERON:0007284!3.89e-24!86;UBERON:0000955!9.69e-24!69;UBERON:0006238!9.69e-24!69;UBERON:0002616!1.98e-22!59;UBERON:0002780!6.12e-22!41;UBERON:0001890!6.12e-22!41;UBERON:0006240!6.12e-22!41;UBERON:0002346!9.90e-21!90;UBERON:0003080!1.27e-20!42;UBERON:0003056!1.62e-20!61;UBERON:0004121!4.84e-18!169;UBERON:0002020!7.05e-18!34;UBERON:0003528!7.05e-18!34;UBERON:0001893!8.65e-18!34;UBERON:0002791!3.90e-17!33;UBERON:0000033!4.95e-17!123;UBERON:0001869!7.32e-17!32;UBERON:0000153!1.76e-16!129;UBERON:0007811!1.76e-16!129;UBERON:0000924!4.34e-16!173;UBERON:0006601!4.34e-16!173;UBERON:0002619!3.97e-15!22;UBERON:0001950!5.05e-14!20;UBERON:0007023!5.49e-13!115;UBERON:0000956!1.24e-12!25;UBERON:0000203!1.24e-12!25;UBERON:0000064!3.14e-11!219;UBERON:0000483!5.68e-09!309;UBERON:0000119!1.33e-08!312;UBERON:0000025!2.05e-08!194;UBERON:0000475!1.06e-07!365;UBERON:0003076!1.25e-07!15;UBERON:0003057!1.25e-07!15;UBERON:0002308!8.35e-07!9;UBERON:0000125!8.35e-07!9;UBERON:0004111!8.41e-07!241;UBERON:0002420!8.51e-07!9;UBERON:0007245!8.51e-07!9;UBERON:0010009!8.51e-07!9;UBERON:0010011!8.51e-07!9;UBERON:0000454!8.51e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.36e-20;41!UBERON:0001890;5.36e-20;41!UBERON:0002619;3.79e-19;22!UBERON:0003528;5.59e-19;34!UBERON:0002020;5.59e-19;34!UBERON:0001869;6.52e-19;32!UBERON:0001893;7.17e-19;34!UBERON:0002791;9.65e-19;32!UBERON:0000073;1.32e-18;53!UBERON:0002616;1.32e-18;53!UBERON:0001950;1.02e-17;20!UBERON:0000956;1.43e-15;25!UBERON:0000203;1.43e-15;25!UBERON:0000955;5.53e-14;68!UBERON:0001017;6.52e-14;75!UBERON:0001016;1.54e-12;83!UBERON:0000125;2.22e-08;9!UBERON:0002308;2.22e-08;9!UBERON:0002420;2.41e-08;9!UBERON:0007245;2.41e-08;9!UBERON:0010009;2.41e-08;9!UBERON:0010011;2.41e-08;9!UBERON:0000454;2.41e-08;9!UBERON:0006555;3.94e-08;15!UBERON:0004819;3.94e-08;15!UBERON:0001285;3.94e-08;15!UBERON:0007684;3.94e-08;15!UBERON:0004211;7.59e-08;10!UBERON:0009773;7.59e-08;10!UBERON:0001231;7.59e-08;10!UBERON:0004810;7.59e-08;10!UBERON:0004732;3.28e-07;13!UBERON:0001894;7.76e-07;7!UBERON:0009663;7.99e-07;7!UBERON:0001871;8.09e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.59e-35,56;UBERON:0005068,9.59e-35,56;UBERON:0006241,9.59e-35,56;UBERON:0007135,9.59e-35,56;UBERON:0001017,2.77e-34,81;UBERON:0001016,5.97e-34,89;UBERON:0000073,1.17e-32,53;UBERON:0002616,1.17e-32,53;UBERON:0000955,2.58e-31,68;UBERON:0006238,2.58e-31,68;UBERON:0003075,1.19e-30,82;UBERON:0007284,1.19e-30,82;UBERON:0002346,8.25e-28,86;UBERON:0010371,2.00e-27,104;UBERON:0002780,2.14e-27,41;UBERON:0001890,2.14e-27,41;UBERON:0003080,2.14e-27,41;UBERON:0006240,2.14e-27,41;UBERON:0003056,4.75e-27,61;UBERON:0003528,3.55e-22,34;UBERON:0002020,3.55e-22,34;UBERON:0001893,4.60e-22,34;UBERON:0001869,7.18e-21,32;UBERON:0002791,1.22e-20,32;UBERON:0002619,5.45e-19,22;UBERON:0004121,8.17e-19,171;UBERON:0000924,8.17e-19,171;UBERON:0006601,8.17e-19,171;UBERON:0001950,1.44e-17,20;UBERON:0000956,1.91e-15,25;UBERON:0000203,1.91e-15,25;UBERON:0010314,6.66e-14,132;UBERON:0007023,1.84e-13,114;UBERON:0000025,4.09e-12,192;UBERON:0000483,2.64e-10,306;UBERON:0011216,5.28e-10,223;UBERON:0000119,7.91e-10,309;UBERON:0004111,1.43e-08,240;UBERON:0003076,1.69e-08,15;UBERON:0003057,1.69e-08,15;UBERON:0000125,2.64e-08,9;UBERON:0002308,2.64e-08,9;UBERON:0002420,2.71e-08,9;UBERON:0007245,2.71e-08,9;UBERON:0010009,2.71e-08,9;UBERON:0010011,2.71e-08,9;UBERON:0000454,2.71e-08,9;UBERON:0006555,4.05e-08,16;UBERON:0004819,4.05e-08,16;UBERON:0004810,9.57e-08,10;UBERON:0004211,1.17e-07,15;UBERON:0009773,1.17e-07,15;UBERON:0001231,1.17e-07,15;UBERON:0001285,1.17e-07,15;UBERON:0007684,1.17e-07,15;UBERON:0004208,1.17e-07,15;UBERON:0004732,2.96e-07,13;UBERON:0001894,8.57e-07,7;UBERON:0006222,8.57e-07,7;UBERON:0009663,8.79e-07,7;UBERON:0001871,9.09e-07,6 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,0.872338524100369,2.53299878168311,0,0.261185628199839,2.45733936501509,9.07141518364156,0.655324116390517,2.11013582582763,0.618831764800233,1.32558950291166,0,0.602694528023977,1.46062018077475,1.95173119516203,0.861847406537515,0.408001382488506,1.56727360739044,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0.0787107813136792,0,0,0.309632246632152,2.75826367343678,0.30120591877825,0.739508020333575,3.33108962495297,0.284338464974843,0,0,0.802177789880567,0,0.895661896959697,0.647787332037959,1.03030227053675,0.436194716338694,0.377875943688809,0,0,0.411167888021826,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0.818718450173537,0,0,0.320929027076094,0,0,0.598390972864896,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0.212604299965044,0.838634582033504,0.22465726229299,0.450530678524519,0.16072558669708,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0.393419540227666,1.17903228824749,1.02800749499755,1.17030546773475,0,0.473447805734733,0,0.445641827540694,0.294605907474837,0.443067789167242,0.812411591295047,0.640456598628376,0.260118695119756,0.493313713811028,0.552700035571697,0.289803085735052,1.03800594213442,0.535081656179426,1.04535523804977,0.339928028092699,0.383220493601921,0.68725489096526,0.506039384039006,0.637130828648193,0,0.950452044448374,0.150575119077773,0.383959833463255,0,0.473554504088034,0.821127996921047,1.00803371612366,1.06976078313403,0.434473211648397,0,0,0,0.361439152384566,0.50133791063589,0.724232594804119,0.795285947051099,0,1.13441780596881,1.33037638477538,1.22968699970376,3.73290365168481,2.18577172975525,0.741568885568859,1.29818957461873,2.43781632218974,3.72282289452822,0,0,0,0.198762407366705,1.72046919021225,0.694281003215189,0.56530794192401,0,0,0.417989933073621,1.03366703667732,0.71153252537342,0.33472061276467,1.61131726843659,0.760272105718513,0.24406205754817,0,2.43042584364528,0.446498641420399,0.22452937262617,1.12611480483322,0,0,0.549605231791222,0,0,0.872188104285069,0,0.379891534993739,1.19168262731897,1.72101972449288,0,0.560677600142307,0,1.48000529050296,0.622422070799533,0.269421344139376,0.653847612453835,0.302714855289863,0,0.937285727335186,0.312160076830321,0,0,0.587172493218824,0.809364721840658,0.140450806702248,1.02077085627447,0.859840221182376,0.516628905878827,0,0.247266929278557,1.82032272387605,1.43723628363248,0.168336113954066,0.750711119231785,0.277064115484183,0.438977620880838,0.30648779579902,0.600952235626387,0.113432183160021,1.07633781413317,0.427114777637135,0.211931901159562,1.20036438433761,0.309157587715317,2.31876486041066,1.11670113798954,1.68776332241266,0.389748020644795,1.26216887122057,0.276149695926898,0,1.77504796258307,0.503760491138201,0.67824236924195,1.15956511897978,1.63647672354501,1.43402297694502,1.21973706129595,0.927708378250397,0.929551542956147,1.86589899027667,2.01856680700503,1.45990943630332,0,1.28648187638577,1.38134921352481,1.39310378409594,0.721879481669586,0.236613600079688,0,0.723033089650446,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,1.15424147083917,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0,1.7658523976586,2.58275720940538,1.02940686179115,1.75600456653801,0,0.100528972411631,0.833296006426766,0.325808305310325,7.27954349695705,0,1.507095264676,0.234817388471643,0.433099343283221,0,0,3.95102198979638,3.43394464837949,2.95460407304877,1.40402559083543,2.52672975890838,4.68669169933885,0.503946384596579,0.850650583454319,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.968532774145487,1.24396869324463,1.29707958075265,2.14612136824846,1.8414389344729,4.58386110669933,11.7217447210047,10.2643467613623,1.23392991243988,3.00343057843917,2.00078502841405,0.336393253036082,0.43596006883328,0.07333828582095,0.775630294546667,10.7296933755565,0,1.06375246633948,3.12022310734098,0,0,0,0.285955987316295,2.17048642156577,1.64648067356154,0,0,0,1.50719688529793,0.871533458600294,1.09970290300263,3.64871341923571,0.502257091432126,0,0.479249710983165,2.29723871668228,0,0.434343920002738,0.821905290201534,1.43248770591916,1.34502172792233,0.394061520403854,0,0,0,6.50699269288109,6.95959931499926,3.85287410269002,5.74144876487847,0,0,0,0.12269149171914,0.500170521059677,0,0.623912584592421,0.356857977594324,0,0.819989904948992,0.902838299183157,2.27407504055985,1.03473071292505,0,0.553107505625109,0.695068915744663,0.587403472388222,0.686286847621712,0.620304078368662,0.215714200818617,0.533637789017222,1.21251028578504,0,0.907170879989041,0,1.68808170616869,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.532685175939381,0.0821271560138091,0,0,0.966875596732978,2.6065841139427,0,0.114814448164607,0.182091168006717,0.131124414959424,2.25599806453706,3.69673618101191,25.0991926136594,8.76835347919564,4.22206515571503,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| |||
|short_description=p1@PDZD7 | |||
}} |
Latest revision as of 22:32, 15 September 2015
Short description: | p1@PDZD7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDZD7_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000370215, ENST00000393462, ENST00000470414, ENST00000474125, uc001ksn.2, uc001kso.1_5end |
EntrezGene: | PDZD7 |
HGNC: | 26257 |
UniProt: | Q9H5P4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 9.57e-08 | 10 |
nephron tubule epithelial cell | 9.57e-08 | 10 |
epithelial cell of nephron | 1.17e-07 | 15 |
kidney cell | 3.91e-07 | 17 |
kidney epithelial cell | 3.91e-07 | 17 |