FFCP PHASE1:Hg19::chr12:16759524..16759549,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:16759524..16759549,- to FFCP PHASE1:Hg19::chr12:16759524..16759549,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TAP4 | |UniProt=Q8TAP4 | ||
|association_with_transcript=0bp_to_NM_018640_5end | |||
|cluster_id=chr12:16759524..16759549,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_LMO3_5end | |||
|id=chr12:16759524..16759549,- | |||
|ontology_enrichment_celltype=CL:0000136!7.50e-08!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.81e-18;82!UBERON:0006215;3.51e-08;3!UBERON:0010122;4.62e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.18e-52!115;UBERON:0000073!1.43e-46!94;UBERON:0001016!1.43e-46!94;UBERON:0001017!2.26e-46!82;UBERON:0005743!8.76e-45!86;UBERON:0001049!4.40e-44!57;UBERON:0005068!4.40e-44!57;UBERON:0006241!4.40e-44!57;UBERON:0007135!4.40e-44!57;UBERON:0000955!3.87e-38!69;UBERON:0006238!3.87e-38!69;UBERON:0002616!1.11e-37!59;UBERON:0003080!3.41e-35!42;UBERON:0002780!3.44e-34!41;UBERON:0001890!3.44e-34!41;UBERON:0006240!3.44e-34!41;UBERON:0002346!6.88e-33!90;UBERON:0001893!2.87e-31!34;UBERON:0003075!4.31e-31!86;UBERON:0007284!4.31e-31!86;UBERON:0002020!4.53e-31!34;UBERON:0003528!4.53e-31!34;UBERON:0002791!4.65e-30!33;UBERON:0001869!3.18e-29!32;UBERON:0000924!3.20e-25!173;UBERON:0006601!3.20e-25!173;UBERON:0002619!5.66e-25!22;UBERON:0004121!1.20e-23!169;UBERON:0003056!2.30e-23!61;UBERON:0001950!1.13e-22!20;UBERON:0000153!2.00e-22!129;UBERON:0007811!2.00e-22!129;UBERON:0000033!4.84e-21!123;UBERON:0000956!4.89e-21!25;UBERON:0000203!4.89e-21!25;UBERON:0002420!5.65e-12!9;UBERON:0007245!5.65e-12!9;UBERON:0010009!5.65e-12!9;UBERON:0010011!5.65e-12!9;UBERON:0000454!5.65e-12!9;UBERON:0002308!1.16e-11!9;UBERON:0000125!1.16e-11!9;UBERON:0000025!3.61e-11!194;UBERON:0000475!1.39e-10!365;UBERON:0003076!6.06e-10!15;UBERON:0003057!6.06e-10!15;UBERON:0004111!8.99e-10!241;UBERON:0002298!9.82e-10!8;UBERON:0009663!1.11e-09!7;UBERON:0000200!1.24e-08!6;UBERON:0000922!3.26e-08!612;UBERON:0000483!3.31e-08!309;UBERON:0001871!4.50e-08!7;UBERON:0000119!6.62e-08!312;UBERON:0002050!1.13e-07!605;UBERON:0005423!1.13e-07!605;UBERON:0000468!1.27e-07!659;UBERON:0000477!1.42e-07!286;UBERON:0000349!1.95e-07!5;UBERON:0004733!2.09e-07!12;UBERON:0002028!2.09e-07!12;UBERON:0007277!2.09e-07!12;UBERON:0000923!2.23e-07!604;UBERON:0005291!2.23e-07!604;UBERON:0006598!2.23e-07!604;UBERON:0002532!2.23e-07!604;UBERON:0002021!3.05e-07!5;UBERON:0001872!4.13e-07!5;UBERON:0000064!6.39e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.18e-58;34!UBERON:0003528;7.42e-58;34!UBERON:0002020;7.42e-58;34!UBERON:0001869;1.34e-57;32!UBERON:0002791;2.51e-57;32!UBERON:0002780;4.32e-55;41!UBERON:0001890;4.32e-55;41!UBERON:0002619;1.54e-53;22!UBERON:0000073;1.85e-52;53!UBERON:0002616;1.85e-52;53!UBERON:0001950;1.62e-48;20!UBERON:0000956;1.39e-46;25!UBERON:0000203;1.39e-46;25!UBERON:0000955;7.26e-35;68!UBERON:0001017;1.91e-33;75!UBERON:0001016;1.79e-27;83!UBERON:0002420;2.86e-24;9!UBERON:0007245;2.86e-24;9!UBERON:0010009;2.86e-24;9!UBERON:0010011;2.86e-24;9!UBERON:0000454;2.86e-24;9!UBERON:0000125;1.45e-23;9!UBERON:0002308;1.45e-23;9!UBERON:0007023;5.43e-20;114!UBERON:0009663;2.82e-19;7!UBERON:0000200;5.49e-17;6!UBERON:0004733;9.64e-16;12!UBERON:0002028;9.64e-16;12!UBERON:0002298;4.08e-15;6!UBERON:0004732;2.16e-14;13!UBERON:0000349;2.61e-14;5!UBERON:0002021;6.46e-14;5!UBERON:0001871;7.05e-14;6!UBERON:0001872;9.48e-14;5!UBERON:0000369;1.73e-12;4!UBERON:0002435;1.73e-12;4!UBERON:0000204;1.73e-12;4!UBERON:0011216;1.96e-10;132!UBERON:0005383;8.53e-10;3!UBERON:0005382;8.53e-10;3!UBERON:0002680;1.16e-09;9!UBERON:0001895;1.16e-09;9!UBERON:0001870;1.78e-09;3!UBERON:0001894;3.26e-09;7!UBERON:0001896;1.93e-08;3!UBERON:0005290;1.93e-08;3!UBERON:0000988;2.34e-08;3!UBERON:0010314;1.51e-07;132!UBERON:0001873;4.62e-07;2!UBERON:0002702;8.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.48e-94,56;UBERON:0005068,3.48e-94,56;UBERON:0006241,3.48e-94,56;UBERON:0007135,3.48e-94,56;UBERON:0000073,1.00e-91,53;UBERON:0002616,1.00e-91,53;UBERON:0001017,9.74e-86,81;UBERON:0000955,3.46e-78,68;UBERON:0006238,3.46e-78,68;UBERON:0002780,9.39e-77,41;UBERON:0001890,9.39e-77,41;UBERON:0003080,9.39e-77,41;UBERON:0006240,9.39e-77,41;UBERON:0001016,6.66e-76,89;UBERON:0001893,3.54e-69,34;UBERON:0003528,9.83e-69,34;UBERON:0002020,9.83e-69,34;UBERON:0007023,2.11e-67,114;UBERON:0001869,1.16e-64,32;UBERON:0002791,3.28e-64,32;UBERON:0003075,3.71e-63,82;UBERON:0007284,3.71e-63,82;UBERON:0002346,2.42e-62,86;UBERON:0002619,1.84e-53,22;UBERON:0003056,3.26e-51,61;UBERON:0001950,2.11e-48,20;UBERON:0010371,4.12e-47,104;UBERON:0000956,1.62e-46,25;UBERON:0000203,1.62e-46,25;UBERON:0010314,1.10e-41,132;UBERON:0004121,3.59e-36,171;UBERON:0000924,3.59e-36,171;UBERON:0006601,3.59e-36,171;UBERON:0011216,6.92e-28,223;UBERON:0002420,2.99e-24,9;UBERON:0007245,2.99e-24,9;UBERON:0010009,2.99e-24,9;UBERON:0010011,2.99e-24,9;UBERON:0000454,2.99e-24,9;UBERON:0000125,1.43e-23,9;UBERON:0002308,1.43e-23,9;UBERON:0000025,9.51e-20,192;UBERON:0009663,3.03e-19,7;UBERON:0003076,3.64e-18,15;UBERON:0003057,3.64e-18,15;UBERON:0004111,1.38e-17,240;UBERON:0000200,5.82e-17,6;UBERON:0004733,9.32e-16,12;UBERON:0002028,9.32e-16,12;UBERON:0007277,9.32e-16,12;UBERON:0002298,3.94e-15,6;UBERON:0004732,2.10e-14,13;UBERON:0000349,2.31e-14,5;UBERON:0002021,6.07e-14,5;UBERON:0001871,7.82e-14,6;UBERON:0001872,1.17e-13,5;UBERON:0000369,1.74e-12,4;UBERON:0002435,1.74e-12,4;UBERON:0000204,1.74e-12,4;UBERON:0010082,1.74e-12,4;UBERON:0000483,5.52e-11,306;UBERON:0000119,9.39e-11,309;UBERON:0005383,8.55e-10,3;UBERON:0005382,8.55e-10,3;UBERON:0002680,1.13e-09,9;UBERON:0001895,1.13e-09,9;UBERON:0010092,1.13e-09,9;UBERON:0000923,1.45e-09,560;UBERON:0010316,1.45e-09,560;UBERON:0005291,1.45e-09,560;UBERON:0006598,1.45e-09,560;UBERON:0010317,1.45e-09,560;UBERON:0002532,1.45e-09,560;UBERON:0001870,1.81e-09,3;UBERON:0002050,2.24e-09,564;UBERON:0001894,2.86e-09,7;UBERON:0006222,2.86e-09,7;UBERON:0005423,1.33e-08,581;UBERON:0001896,1.93e-08,3;UBERON:0005290,1.93e-08,3;UBERON:0010096,1.93e-08,3;UBERON:0000988,2.25e-08,3;UBERON:0000922,4.00e-08,592;UBERON:0001873,4.63e-07,2;UBERON:0010122,4.63e-07,2;UBERON:0002702,8.80e-07,2 | |||
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| ||
|short_description=p5@LMO3 | |||
}} | }} |
Latest revision as of 16:25, 17 September 2015
Short description: | p5@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_018640_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | Q8TAP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data