FFCP PHASE1:Hg19::chr18:11751553..11751597,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:11751553..11751597,+ to FFCP PHASE1:Hg19::chr18:11751553..11751597,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2774 | |EntrezGene=2774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4388 | |HGNC=4388 | ||
|TSSclassifier=strong | |||
|UniProt=P38405,A8K1Y9,Q86XU3,Q8N2B4 | |UniProt=P38405,A8K1Y9,Q86XU3,Q8N2B4 | ||
|association_with_transcript=0bp_to_ENST00000269162,NM_001142339,NM_002071,uc002kqd.2,uc010dkz.2_5end | |||
|cluster_id=chr18:11751553..11751597,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_GNAL_5end | |||
|id=chr18:11751553..11751597,+ | |||
|ontology_enrichment_celltype=CL:0000148!6.11e-13!10;CL:0000541!6.11e-13!10;CL:0000147!1.46e-10!14;CL:0002322!8.08e-09!5;CL:0000540!5.24e-07!6;CL:0000031!5.24e-07!6;CL:0000404!5.24e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.62e-17;5!CL:0000148;8.37e-17;10!CL:0000147;1.05e-11;14!CL:0000039;4.76e-08;7!CL:0000586;4.76e-08;7!CL:0000710;6.98e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.09e-17,10;CL:0000541,8.09e-17,10;CL:0002322,8.61e-17,5;CL:0000147,1.03e-11,14;CL:0000039,5.24e-08,7;CL:0000586,5.24e-08,7;CL:0000710,6.87e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.14e-11;82!UBERON:0010122;6.10e-09;2!UBERON:0009117;1.96e-08;10!UBERON:0005564;1.96e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-59!115;UBERON:0005743!4.36e-50!86;UBERON:0001017!2.75e-49!82;UBERON:0001049!1.01e-48!57;UBERON:0005068!1.01e-48!57;UBERON:0006241!1.01e-48!57;UBERON:0007135!1.01e-48!57;UBERON:0002780!5.79e-47!41;UBERON:0001890!5.79e-47!41;UBERON:0006240!5.79e-47!41;UBERON:0003080!1.45e-45!42;UBERON:0002616!3.76e-44!59;UBERON:0000073!1.23e-43!94;UBERON:0001016!1.23e-43!94;UBERON:0003075!3.08e-40!86;UBERON:0007284!3.08e-40!86;UBERON:0000955!4.71e-39!69;UBERON:0006238!4.71e-39!69;UBERON:0002346!1.08e-37!90;UBERON:0001893!2.68e-36!34;UBERON:0002791!9.22e-35!33;UBERON:0003056!1.57e-34!61;UBERON:0001869!9.47e-34!32;UBERON:0002020!3.88e-33!34;UBERON:0003528!3.88e-33!34;UBERON:0002619!1.63e-26!22;UBERON:0000153!7.95e-24!129;UBERON:0007811!7.95e-24!129;UBERON:0001950!1.98e-23!20;UBERON:0000956!1.15e-22!25;UBERON:0000203!1.15e-22!25;UBERON:0004121!1.17e-22!169;UBERON:0000033!1.27e-22!123;UBERON:0000924!1.05e-21!173;UBERON:0006601!1.05e-21!173;UBERON:0002420!3.25e-16!9;UBERON:0007245!3.25e-16!9;UBERON:0010009!3.25e-16!9;UBERON:0010011!3.25e-16!9;UBERON:0000454!3.25e-16!9;UBERON:0009663!6.18e-13!7;UBERON:0001894!3.23e-12!7;UBERON:0006222!3.23e-12!7;UBERON:0000025!4.67e-12!194;UBERON:0002308!4.81e-12!9;UBERON:0000125!4.81e-12!9;UBERON:0000477!2.59e-11!286;UBERON:0004111!6.10e-11!241;UBERON:0001871!2.52e-10!7;UBERON:0000200!3.61e-10!6;UBERON:0000473!5.52e-10!8;UBERON:0000349!8.53e-10!5;UBERON:0003135!9.76e-09!11;UBERON:0000369!1.60e-08!4;UBERON:0002435!1.60e-08!4;UBERON:0000204!1.60e-08!4;UBERON:0010082!1.60e-08!4;UBERON:0000064!1.06e-07!219;UBERON:0000483!1.94e-07!309;UBERON:0003296!2.15e-07!4;UBERON:0010133!2.15e-07!4;UBERON:0000119!3.26e-07!312;UBERON:0005383!8.26e-07!3;UBERON:0005382!8.26e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.38e-58;41!UBERON:0001890;3.38e-58;41!UBERON:0001869;6.14e-55;32!UBERON:0001893;3.23e-53;34!UBERON:0002791;6.15e-52;32!UBERON:0003528;1.42e-47;34!UBERON:0002020;1.42e-47;34!UBERON:0002619;3.19e-45;22!UBERON:0000956;1.81e-39;25!UBERON:0000203;1.81e-39;25!UBERON:0001950;5.73e-39;20!UBERON:0000073;1.27e-36;53!UBERON:0002616;1.27e-36;53!UBERON:0002420;1.75e-26;9!UBERON:0007245;1.75e-26;9!UBERON:0010009;1.75e-26;9!UBERON:0010011;1.75e-26;9!UBERON:0000454;1.75e-26;9!UBERON:0000955;2.03e-25;68!UBERON:0001017;2.73e-23;75!UBERON:0009663;1.11e-19;7!UBERON:0000349;8.87e-19;5!UBERON:0001894;1.68e-18;7!UBERON:0001016;2.98e-18;83!UBERON:0001871;6.34e-18;6!UBERON:0000369;3.58e-16;4!UBERON:0002435;3.58e-16;4!UBERON:0000204;3.58e-16;4!UBERON:0000125;3.88e-15;9!UBERON:0002308;3.88e-15;9!UBERON:0000473;7.24e-15;8!UBERON:0000200;3.93e-14;6!UBERON:0005383;1.37e-12;3!UBERON:0005382;1.37e-12;3!UBERON:0001872;1.56e-11;5!UBERON:0007023;1.10e-10;114!UBERON:0003135;1.22e-10;11!UBERON:0001873;6.10e-09;2!UBERON:0003296;8.85e-09;4!UBERON:0010133;8.85e-09;4!UBERON:0000007;1.05e-08;2!UBERON:0001875;1.20e-08;2!UBERON:0006514;1.20e-08;2!UBERON:0001876;1.29e-08;2!UBERON:0002784;1.77e-08;4!UBERON:0001897;2.77e-08;2!UBERON:0001954;2.77e-08;2!UBERON:0003022;2.77e-08;2!UBERON:0002421;2.77e-08;2!UBERON:0010225;2.77e-08;2!UBERON:0002600;2.77e-08;2!UBERON:0002360;3.57e-08;2!UBERON:0000094;3.57e-08;2!UBERON:0010743;3.57e-08;2!UBERON:0002771;1.06e-07;2!UBERON:0000922;5.82e-07;49!UBERON:0010314;6.76e-07;132!UBERON:0011216;9.33e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.43e-80,41;UBERON:0001890,2.43e-80,41;UBERON:0003080,2.43e-80,41;UBERON:0006240,2.43e-80,41;UBERON:0001893,4.09e-63,34;UBERON:0001869,2.18e-62,32;UBERON:0000073,1.27e-60,53;UBERON:0002616,1.27e-60,53;UBERON:0002791,3.08e-57,32;UBERON:0001049,5.42e-57,56;UBERON:0005068,5.42e-57,56;UBERON:0006241,5.42e-57,56;UBERON:0007135,5.42e-57,56;UBERON:0001017,1.40e-56,81;UBERON:0003528,1.35e-53,34;UBERON:0002020,1.35e-53,34;UBERON:0003056,1.01e-51,61;UBERON:0000955,3.46e-51,68;UBERON:0006238,3.46e-51,68;UBERON:0001016,4.24e-50,89;UBERON:0002619,2.08e-45,22;UBERON:0000956,1.25e-39,25;UBERON:0000203,1.25e-39,25;UBERON:0001950,4.09e-39,20;UBERON:0003075,1.58e-36,82;UBERON:0007284,1.58e-36,82;UBERON:0002346,1.82e-34,86;UBERON:0007023,7.08e-32,114;UBERON:0010371,3.82e-27,104;UBERON:0002420,1.76e-26,9;UBERON:0007245,1.76e-26,9;UBERON:0010009,1.76e-26,9;UBERON:0010011,1.76e-26,9;UBERON:0000454,1.76e-26,9;UBERON:0004121,5.81e-22,171;UBERON:0000924,5.81e-22,171;UBERON:0006601,5.81e-22,171;UBERON:0010314,3.15e-21,132;UBERON:0009663,1.14e-19,7;UBERON:0000349,7.70e-19,5;UBERON:0001894,2.22e-18,7;UBERON:0006222,2.22e-18,7;UBERON:0001871,7.84e-18,6;UBERON:0011216,1.02e-16,223;UBERON:0000369,3.59e-16,4;UBERON:0002435,3.59e-16,4;UBERON:0000204,3.59e-16,4;UBERON:0010082,3.59e-16,4;UBERON:0000125,3.98e-15,9;UBERON:0002308,3.98e-15,9;UBERON:0000473,8.02e-15,8;UBERON:0000200,3.89e-14,6;UBERON:0005383,1.37e-12,3;UBERON:0005382,1.37e-12,3;UBERON:0001872,1.29e-11,5;UBERON:0000025,3.80e-11,192;UBERON:0003135,1.31e-10,11;UBERON:0001873,6.11e-09,2;UBERON:0010122,6.11e-09,2;UBERON:0004111,7.19e-09,240;UBERON:0003296,1.15e-08,4;UBERON:0010133,1.15e-08,4;UBERON:0000007,1.15e-08,2;UBERON:0001876,1.24e-08,2;UBERON:0001875,1.24e-08,2;UBERON:0006514,1.24e-08,2;UBERON:0002784,2.10e-08,4;UBERON:0001954,2.49e-08,2;UBERON:0003022,2.49e-08,2;UBERON:0002421,2.49e-08,2;UBERON:0002600,2.49e-08,2;UBERON:0001897,2.68e-08,2;UBERON:0010225,2.68e-08,2;UBERON:0002360,4.12e-08,2;UBERON:0000094,4.12e-08,2;UBERON:0010743,4.12e-08,2;UBERON:0002771,1.61e-07,2 | |||
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| ||
|short_description=p4@GNAL | |||
}} | }} |
Latest revision as of 18:47, 18 September 2015
Short description: | p4@GNAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNAL_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000269162, NM_001142339, NM_002071, uc002kqd.2, uc010dkz.2_5end |
EntrezGene: | GNAL |
HGNC: | 4388 |
UniProt: | P38405A8K1Y9Q86XU3Q8N2B4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.09e-17 | 10 |
melanoblast | 8.09e-17 | 10 |
embryonic stem cell | 8.61e-17 | 5 |
pigment cell | 1.03e-11 | 14 |
germ line cell | 5.24e-08 | 7 |
germ cell | 5.24e-08 | 7 |
neurecto-epithelial cell | 6.87e-08 | 20 |