FFCP PHASE1:Hg19::chr18:4455260..4455274,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:4455260..4455274,- to FFCP PHASE1:Hg19::chr18:4455260..4455274,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9229 | |EntrezGene=9229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2905 | |HGNC=2905 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z9Y4,O14490 | |UniProt=B7Z9Y4,O14490 | ||
|association_with_transcript=0bp_to_NM_001242761,NM_004746,uc010wyz.1_5end | |||
|cluster_id=chr18:4455260..4455274,- | |||
|description=CAGE_peak_7_at_DLGAP1_5end | |||
|id=chr18:4455260..4455274,- | |||
|ontology_enrichment_celltype=CL:0000047!2.09e-10!8;CL:0000148!3.50e-09!10;CL:0000541!3.50e-09!10;CL:0000540!3.52e-08!6;CL:0000031!3.52e-08!6;CL:0000404!3.52e-08!6;CL:0000133!4.67e-08!59;CL:0000147!3.29e-07!14;CL:0002322!7.49e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.67e-15;6!CL:0000404;4.67e-15;6!CL:0000148;2.37e-08;10!CL:0002322;3.43e-08;5!CL:0002567;7.01e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.40e-19,8;CL:0000540,7.16e-15,6;CL:0000031,7.16e-15,6;CL:0000404,7.16e-15,6;CL:0002322,2.66e-08,5;CL:0000148,2.66e-08,10;CL:0000541,2.66e-08,10;CL:0002567,8.06e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000031;4.67e-15;6!UBERON:0006601;1.42e-10;82!UBERON:0006215;1.66e-09;3!UBERON:0010122;7.77e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.46e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.02e-51!82;UBERON:0005743!4.52e-51!86;UBERON:0000073!5.21e-46!94;UBERON:0001016!5.21e-46!94;UBERON:0001049!1.84e-44!57;UBERON:0005068!1.84e-44!57;UBERON:0006241!1.84e-44!57;UBERON:0007135!1.84e-44!57;UBERON:0002616!1.95e-38!59;UBERON:0000955!7.18e-38!69;UBERON:0006238!7.18e-38!69;UBERON:0002346!2.50e-36!90;UBERON:0003075!2.71e-36!86;UBERON:0007284!2.71e-36!86;UBERON:0002020!3.36e-36!34;UBERON:0003528!3.36e-36!34;UBERON:0002780!4.37e-36!41;UBERON:0001890!4.37e-36!41;UBERON:0006240!4.37e-36!41;UBERON:0001893!4.76e-36!34;UBERON:0003080!6.49e-35!42;UBERON:0002791!6.69e-35!33;UBERON:0001869!1.19e-34!32;UBERON:0007023!1.01e-31!115;UBERON:0003056!4.47e-29!61;UBERON:0000956!1.36e-26!25;UBERON:0000203!1.36e-26!25;UBERON:0000924!2.76e-26!173;UBERON:0006601!2.76e-26!173;UBERON:0004121!8.20e-26!169;UBERON:0000153!1.24e-24!129;UBERON:0007811!1.24e-24!129;UBERON:0000033!4.19e-24!123;UBERON:0002619!4.77e-24!22;UBERON:0001950!1.66e-21!20;UBERON:0000025!1.51e-11!194;UBERON:0002420!1.76e-11!9;UBERON:0007245!1.76e-11!9;UBERON:0010009!1.76e-11!9;UBERON:0010011!1.76e-11!9;UBERON:0000454!1.76e-11!9;UBERON:0002308!5.87e-11!9;UBERON:0000125!5.87e-11!9;UBERON:0003076!1.64e-10!15;UBERON:0003057!1.64e-10!15;UBERON:0004111!1.30e-09!241;UBERON:0009663!5.04e-09!7;UBERON:0000200!1.13e-08!6;UBERON:0001871!1.33e-08!7;UBERON:0000475!2.79e-08!365;UBERON:0000477!4.42e-08!286;UBERON:0004733!4.92e-08!12;UBERON:0002028!4.92e-08!12;UBERON:0007277!4.92e-08!12;UBERON:0000483!7.53e-08!309;UBERON:0000349!8.13e-08!5;UBERON:0001872!1.15e-07!5;UBERON:0000119!1.41e-07!312;UBERON:0004732!3.11e-07!13;UBERON:0002298!4.26e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.52e-47;22!UBERON:0001869;2.35e-47;32!UBERON:0002791;2.71e-44;32!UBERON:0003528;5.60e-44;34!UBERON:0002020;5.60e-44;34!UBERON:0001950;2.35e-42;20!UBERON:0001893;2.39e-42;34!UBERON:0000956;2.40e-41;25!UBERON:0000203;2.40e-41;25!UBERON:0002780;8.45e-33;41!UBERON:0001890;8.45e-33;41!UBERON:0000073;1.31e-32;53!UBERON:0002616;1.31e-32;53!UBERON:0000955;1.25e-22;68!UBERON:0001017;1.76e-22;75!UBERON:0001016;1.53e-19;83!UBERON:0000200;2.45e-15;6!UBERON:0002420;2.79e-14;9!UBERON:0007245;2.79e-14;9!UBERON:0010009;2.79e-14;9!UBERON:0010011;2.79e-14;9!UBERON:0000454;2.79e-14;9!UBERON:0000349;3.50e-14;5!UBERON:0001872;6.17e-14;5!UBERON:0001871;1.31e-13;6!UBERON:0004733;7.09e-13;12!UBERON:0002028;7.09e-13;12!UBERON:0004732;8.98e-12;13!UBERON:0000369;1.07e-11;4!UBERON:0002435;1.07e-11;4!UBERON:0000204;1.07e-11;4!UBERON:0000125;2.82e-10;9!UBERON:0002308;2.82e-10;9!UBERON:0002298;3.39e-10;6!UBERON:0009663;1.06e-09;7!UBERON:0005383;2.35e-09;3!UBERON:0005382;2.35e-09;3!UBERON:0002021;4.45e-09;5!UBERON:0007023;1.65e-08;114!UBERON:0001870;1.96e-08;3!UBERON:0011216;5.49e-08;132!UBERON:0001896;7.01e-08;3!UBERON:0005290;7.01e-08;3!UBERON:0002680;1.59e-07;9!UBERON:0001895;1.59e-07;9!UBERON:0001954;7.35e-07;2!UBERON:0003022;7.35e-07;2!UBERON:0002421;7.35e-07;2!UBERON:0002600;7.35e-07;2!UBERON:0001873;7.77e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-62,81;UBERON:0000073,1.88e-59,53;UBERON:0002616,1.88e-59,53;UBERON:0001016,4.37e-58,89;UBERON:0001049,9.32e-56,56;UBERON:0005068,9.32e-56,56;UBERON:0006241,9.32e-56,56;UBERON:0007135,9.32e-56,56;UBERON:0001869,3.71e-54,32;UBERON:0001893,1.34e-50,34;UBERON:0003528,1.68e-50,34;UBERON:0002020,1.68e-50,34;UBERON:0002791,4.29e-50,32;UBERON:0000955,7.94e-49,68;UBERON:0006238,7.94e-49,68;UBERON:0002619,5.31e-48,22;UBERON:0002780,1.78e-47,41;UBERON:0001890,1.78e-47,41;UBERON:0003080,1.78e-47,41;UBERON:0006240,1.78e-47,41;UBERON:0001950,7.86e-43,20;UBERON:0000956,9.56e-42,25;UBERON:0000203,9.56e-42,25;UBERON:0003075,5.81e-35,82;UBERON:0007284,5.81e-35,82;UBERON:0002346,7.13e-33,86;UBERON:0003056,2.02e-29,61;UBERON:0010371,4.68e-29,104;UBERON:0004121,8.47e-29,171;UBERON:0000924,8.47e-29,171;UBERON:0006601,8.47e-29,171;UBERON:0007023,5.76e-25,114;UBERON:0011216,2.13e-24,223;UBERON:0010314,1.66e-20,132;UBERON:0000200,7.35e-16,6;UBERON:0002420,2.13e-14,9;UBERON:0007245,2.13e-14,9;UBERON:0010009,2.13e-14,9;UBERON:0010011,2.13e-14,9;UBERON:0000454,2.13e-14,9;UBERON:0000349,3.83e-14,5;UBERON:0001871,7.24e-14,6;UBERON:0001872,7.70e-14,5;UBERON:0000025,1.90e-13,192;UBERON:0004733,9.23e-13,12;UBERON:0002028,9.23e-13,12;UBERON:0007277,9.23e-13,12;UBERON:0000369,1.10e-11,4;UBERON:0002435,1.10e-11,4;UBERON:0000204,1.10e-11,4;UBERON:0010082,1.10e-11,4;UBERON:0004732,1.14e-11,13;UBERON:0000125,2.13e-10,9;UBERON:0002308,2.13e-10,9;UBERON:0002298,5.08e-10,6;UBERON:0003076,6.36e-10,15;UBERON:0003057,6.36e-10,15;UBERON:0009663,8.48e-10,7;UBERON:0004111,2.07e-09,240;UBERON:0005383,2.33e-09,3;UBERON:0005382,2.33e-09,3;UBERON:0002021,4.02e-09,5;UBERON:0001870,1.03e-08,3;UBERON:0001896,1.14e-07,3;UBERON:0005290,1.14e-07,3;UBERON:0010096,1.14e-07,3;UBERON:0002680,1.51e-07,9;UBERON:0001895,1.51e-07,9;UBERON:0010092,1.51e-07,9;UBERON:0001873,7.47e-07,2;UBERON:0010122,7.47e-07,2;UBERON:0001954,7.91e-07,2;UBERON:0003022,7.91e-07,2;UBERON:0002421,7.91e-07,2;UBERON:0002600,7.91e-07,2 | |||
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| ||
|short_description=p7@DLGAP1 | |||
}} | }} |
Latest revision as of 15:45, 19 September 2015
Short description: | p7@DLGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_DLGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001242761, NM_004746, uc010wyz.1_5end |
EntrezGene: | DLGAP1 |
HGNC: | 2905 |
UniProt: | B7Z9Y4O14490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.40e-19 | 8 |
neuron | 7.16e-15 | 6 |
neuroblast | 7.16e-15 | 6 |
electrically signaling cell | 7.16e-15 | 6 |
embryonic stem cell | 2.66e-08 | 5 |
melanocyte | 2.66e-08 | 10 |
melanoblast | 2.66e-08 | 10 |
light melanocyte | 8.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.61e-07 | 2 |