FFCP PHASE1:Hg19::chr3:138048653..138048677,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:138048653..138048677,- to FFCP PHASE1:Hg19::chr3:138048653..138048677,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=347736 | |EntrezGene=347736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21343 | |HGNC=21343 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPM2,F8WDB2 | |UniProt=C9JPM2,F8WDB2 | ||
|association_with_transcript=0bp_to_ENST00000460099,ENST00000488716_5end | |||
|cluster_id=chr3:138048653..138048677,- | |||
|coexpression_cluster_id=C4285 | |||
|description=CAGE_peak_1_at_NME9_5end | |||
|id=chr3:138048653..138048677,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-15;82!UBERON:0010122;6.39e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.83e-48!57;UBERON:0005068!2.83e-48!57;UBERON:0006241!2.83e-48!57;UBERON:0007135!2.83e-48!57;UBERON:0000955!1.76e-40!69;UBERON:0006238!1.76e-40!69;UBERON:0002616!1.33e-39!59;UBERON:0002780!2.19e-38!41;UBERON:0001890!2.19e-38!41;UBERON:0006240!2.19e-38!41;UBERON:0007023!4.57e-38!115;UBERON:0001017!7.71e-38!82;UBERON:0003080!3.64e-37!42;UBERON:0005743!9.20e-37!86;UBERON:0001893!2.69e-35!34;UBERON:0002020!3.18e-35!34;UBERON:0003528!3.18e-35!34;UBERON:0002791!4.72e-34!33;UBERON:0003075!5.27e-34!86;UBERON:0007284!5.27e-34!86;UBERON:0001869!6.16e-33!32;UBERON:0000073!1.13e-32!94;UBERON:0001016!1.13e-32!94;UBERON:0002346!1.17e-31!90;UBERON:0000153!1.29e-28!129;UBERON:0007811!1.29e-28!129;UBERON:0003056!5.15e-27!61;UBERON:0000033!2.81e-26!123;UBERON:0002619!1.27e-25!22;UBERON:0000956!5.97e-24!25;UBERON:0000203!5.97e-24!25;UBERON:0001950!5.42e-23!20;UBERON:0004121!1.18e-16!169;UBERON:0000924!7.97e-16!173;UBERON:0006601!7.97e-16!173;UBERON:0002308!7.37e-13!9;UBERON:0000125!7.37e-13!9;UBERON:0003076!6.28e-12!15;UBERON:0003057!6.28e-12!15;UBERON:0009663!1.79e-10!7;UBERON:0000025!3.93e-10!194;UBERON:0002420!3.97e-10!9;UBERON:0007245!3.97e-10!9;UBERON:0010009!3.97e-10!9;UBERON:0010011!3.97e-10!9;UBERON:0000454!3.97e-10!9;UBERON:0004111!9.76e-10!241;UBERON:0000200!1.10e-09!6;UBERON:0004733!8.97e-09!12;UBERON:0002028!8.97e-09!12;UBERON:0007277!8.97e-09!12;UBERON:0002298!9.43e-09!8;UBERON:0001872!5.33e-08!5;UBERON:0004732!6.50e-08!13;UBERON:0002021!6.86e-08!5;UBERON:0000477!7.22e-08!286;UBERON:0000475!1.01e-07!365;UBERON:0000064!1.55e-07!219;UBERON:0000369!3.88e-07!4;UBERON:0002435!3.88e-07!4;UBERON:0000204!3.88e-07!4;UBERON:0010082!3.88e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.48e-70;34!UBERON:0001869;7.14e-70;32!UBERON:0002619;5.67e-67;22!UBERON:0002791;4.28e-65;32!UBERON:0003528;9.03e-64;34!UBERON:0002020;9.03e-64;34!UBERON:0001950;1.91e-59;20!UBERON:0000956;1.15e-58;25!UBERON:0000203;1.15e-58;25!UBERON:0002780;1.43e-55;41!UBERON:0001890;1.43e-55;41!UBERON:0000073;1.19e-47;53!UBERON:0002616;1.19e-47;53!UBERON:0000955;2.42e-32;68!UBERON:0001017;8.87e-32;75!UBERON:0000200;6.04e-25;6!UBERON:0001016;1.93e-22;83!UBERON:0001872;4.51e-20;5!UBERON:0000369;1.99e-17;4!UBERON:0002435;1.99e-17;4!UBERON:0000204;1.99e-17;4!UBERON:0007023;1.02e-16;114!UBERON:0002420;3.72e-16;9!UBERON:0000125;3.72e-16;9!UBERON:0007245;3.72e-16;9!UBERON:0002308;3.72e-16;9!UBERON:0010009;3.72e-16;9!UBERON:0010011;3.72e-16;9!UBERON:0000454;3.72e-16;9!UBERON:0009663;6.53e-15;7!UBERON:0001871;1.57e-14;6!UBERON:0005383;7.15e-14;3!UBERON:0005382;7.15e-14;3!UBERON:0001870;9.02e-14;3!UBERON:0002021;1.99e-13;5!UBERON:0000349;3.91e-13;5!UBERON:0001896;5.18e-13;3!UBERON:0005290;5.18e-13;3!UBERON:0004733;1.49e-11;12!UBERON:0002028;1.49e-11;12!UBERON:0002298;4.36e-11;6!UBERON:0004732;1.29e-10;13!UBERON:0001873;6.39e-10;2!UBERON:0002702;8.08e-10;2!UBERON:0002771;9.59e-10;2!UBERON:0011216;2.28e-09;132!UBERON:0000007;3.10e-09;2!UBERON:0001954;3.10e-09;2!UBERON:0003022;3.10e-09;2!UBERON:0002421;3.10e-09;2!UBERON:0002600;3.10e-09;2!UBERON:0010314;8.02e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.47e-86,56;UBERON:0005068,4.47e-86,56;UBERON:0006241,4.47e-86,56;UBERON:0007135,4.47e-86,56;UBERON:0000073,5.98e-86,53;UBERON:0002616,5.98e-86,53;UBERON:0001893,1.74e-79,34;UBERON:0001869,2.14e-78,32;UBERON:0002780,7.29e-76,41;UBERON:0001890,7.29e-76,41;UBERON:0003080,7.29e-76,41;UBERON:0006240,7.29e-76,41;UBERON:0003528,1.09e-73,34;UBERON:0002020,1.09e-73,34;UBERON:0000955,1.65e-72,68;UBERON:0006238,1.65e-72,68;UBERON:0002791,2.06e-72,32;UBERON:0002619,6.37e-67,22;UBERON:0001017,1.74e-63,81;UBERON:0001950,2.63e-59,20;UBERON:0000956,1.28e-58,25;UBERON:0000203,1.28e-58,25;UBERON:0003075,1.68e-56,82;UBERON:0007284,1.68e-56,82;UBERON:0001016,1.97e-56,89;UBERON:0007023,9.20e-55,114;UBERON:0002346,1.61e-53,86;UBERON:0003056,4.37e-49,61;UBERON:0010371,6.56e-43,104;UBERON:0010314,2.79e-36,132;UBERON:0004121,9.23e-26,171;UBERON:0000924,9.23e-26,171;UBERON:0006601,9.23e-26,171;UBERON:0000200,5.42e-25,6;UBERON:0000025,1.75e-22,192;UBERON:0011216,8.61e-22,223;UBERON:0001872,3.97e-20,5;UBERON:0000369,1.19e-17,4;UBERON:0002435,1.19e-17,4;UBERON:0000204,1.19e-17,4;UBERON:0010082,1.19e-17,4;UBERON:0004111,1.83e-17,240;UBERON:0000125,2.69e-16,9;UBERON:0002308,2.69e-16,9;UBERON:0002420,4.02e-16,9;UBERON:0007245,4.02e-16,9;UBERON:0010009,4.02e-16,9;UBERON:0010011,4.02e-16,9;UBERON:0000454,4.02e-16,9;UBERON:0009663,5.87e-15,7;UBERON:0001871,2.39e-14,6;UBERON:0005383,6.35e-14,3;UBERON:0005382,6.35e-14,3;UBERON:0001870,8.54e-14,3;UBERON:0001896,1.67e-13,3;UBERON:0005290,1.67e-13,3;UBERON:0010096,1.67e-13,3;UBERON:0002021,1.82e-13,5;UBERON:0000349,2.96e-13,5;UBERON:0003076,1.04e-12,15;UBERON:0003057,1.04e-12,15;UBERON:0004733,6.14e-12,12;UBERON:0002028,6.14e-12,12;UBERON:0007277,6.14e-12,12;UBERON:0000483,8.74e-12,306;UBERON:0000119,1.38e-11,309;UBERON:0002298,1.67e-11,6;UBERON:0004732,5.72e-11,13;UBERON:0001873,6.29e-10,2;UBERON:0010122,6.29e-10,2;UBERON:0002702,6.85e-10,2;UBERON:0002771,9.24e-10,2;UBERON:0000007,1.89e-09,2;UBERON:0001954,2.43e-09,2;UBERON:0003022,2.43e-09,2;UBERON:0002421,2.43e-09,2;UBERON:0002600,2.43e-09,2 | |||
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| ||
|short_description=p1@NME9 | |||
}} | }} |
Latest revision as of 00:48, 25 September 2015
Short description: | p1@NME9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NME9_5end |
Coexpression cluster: | C4285_medial_medulla_trachea_caudate_middle_insula_putamen |
Association with transcript: | 0bp_to_ENST00000460099, ENST00000488716_5end |
EntrezGene: | NME9 |
HGNC: | 21343 |
UniProt: | C9JPM2F8WDB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data