FF:10072-101I9: Difference between revisions
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|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;3.64010433156397e-223!GO:0043226;organelle;8.42303753132712e-152!GO:0043229;intracellular organelle;4.78669624477729e-151!GO:0043227;membrane-bound organelle;5.17251319397075e-142!GO:0043231;intracellular membrane-bound organelle;5.30251393252959e-142!GO:0005737;cytoplasm;1.46100428686449e-111!GO:0044422;organelle part;1.60102403137593e-91!GO:0044446;intracellular organelle part;1.68505960969855e-90!GO:0032991;macromolecular complex;4.81380274009855e-76!GO:0005634;nucleus;4.97165616603148e-74!GO:0044444;cytoplasmic part;1.72861944370192e-69!GO:0005515;protein binding;5.55177619637914e-62!GO:0043170;macromolecule metabolic process;2.61459722909193e-57!GO:0016043;cellular component organization and biogenesis;6.92276310823818e-56!GO:0003723;RNA binding;1.18164818781075e-54!GO:0044238;primary metabolic process;2.14804579149211e-54!GO:0030529;ribonucleoprotein complex;4.7241207876478e-53!GO:0044237;cellular metabolic process;6.37746538473558e-52!GO:0044428;nuclear part;5.3225987024411e-51!GO:0043283;biopolymer metabolic process;4.58378734259419e-50!GO:0043234;protein complex;6.62499451805287e-42!GO:0043233;organelle lumen;6.50896477354775e-40!GO:0031974;membrane-enclosed lumen;6.50896477354775e-40!GO:0010467;gene expression;7.41231799279852e-40!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.67540920927309e-37!GO:0006396;RNA processing;1.69618238442676e-34!GO:0006996;organelle organization and biogenesis;2.21356237378195e-34!GO:0016071;mRNA metabolic process;5.45291804526137e-33!GO:0033036;macromolecule localization;1.93098082957228e-32!GO:0015031;protein transport;4.61966109394964e-32!GO:0008380;RNA splicing;5.69392122477018e-31!GO:0031090;organelle membrane;1.55279923264573e-30!GO:0003676;nucleic acid binding;6.72021661569969e-30!GO:0005840;ribosome;1.23921930164016e-29!GO:0031981;nuclear lumen;1.84937596448501e-29!GO:0005739;mitochondrion;3.3240291895065e-29!GO:0008104;protein localization;1.01980142173265e-28!GO:0046907;intracellular transport;1.14773850119733e-28!GO:0045184;establishment of protein localization;1.43224294124667e-28!GO:0006397;mRNA processing;2.78859754925409e-28!GO:0043228;non-membrane-bound organelle;7.2697799623007e-26!GO:0043232;intracellular non-membrane-bound organelle;7.2697799623007e-26!GO:0003735;structural constituent of ribosome;9.91956646624617e-26!GO:0019538;protein metabolic process;1.04284066997588e-24!GO:0065003;macromolecular complex assembly;1.23230911095923e-24!GO:0031975;envelope;1.58011121530586e-24!GO:0031967;organelle envelope;2.33090293622921e-24!GO:0051649;establishment of cellular localization;3.35812999358659e-24!GO:0016070;RNA metabolic process;4.53014209121397e-24!GO:0051641;cellular localization;1.26484821106356e-23!GO:0006412;translation;1.5022324788812e-23!GO:0033279;ribosomal subunit;2.65350999650386e-23!GO:0044429;mitochondrial part;8.96492349661073e-23!GO:0022607;cellular component assembly;2.11772958623583e-22!GO:0044267;cellular protein metabolic process;4.19916455870904e-22!GO:0000166;nucleotide binding;9.55979898856335e-22!GO:0044260;cellular macromolecule metabolic process;1.20676581805819e-21!GO:0006259;DNA metabolic process;8.05107113476868e-21!GO:0006886;intracellular protein transport;1.04180793696451e-20!GO:0005829;cytosol;1.41746778474958e-20!GO:0005830;cytosolic ribosome (sensu Eukaryota);8.12922028204446e-20!GO:0005681;spliceosome;3.68280318252434e-19!GO:0006119;oxidative phosphorylation;4.07771080234276e-19!GO:0006512;ubiquitin cycle;4.8145743527638e-19!GO:0005654;nucleoplasm;5.79706226348783e-19!GO:0044445;cytosolic part;1.85311059938238e-18!GO:0005794;Golgi apparatus;2.86072282024187e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;4.70241620457351e-17!GO:0016874;ligase activity;6.39759793340777e-17!GO:0009059;macromolecule biosynthetic process;9.1288665324056e-17!GO:0016192;vesicle-mediated transport;2.76611871897045e-16!GO:0051276;chromosome organization and biogenesis;4.43989224246056e-16!GO:0044451;nucleoplasm part;5.50662367444814e-16!GO:0006323;DNA packaging;5.73002656878923e-16!GO:0043412;biopolymer modification;7.28672320154385e-16!GO:0019866;organelle inner membrane;9.73908935072655e-16!GO:0032553;ribonucleotide binding;1.74005748359701e-15!GO:0032555;purine ribonucleotide binding;1.74005748359701e-15!GO:0044455;mitochondrial membrane part;2.25754995292541e-15!GO:0005740;mitochondrial envelope;2.28966184620452e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.73461374175179e-15!GO:0031966;mitochondrial membrane;3.35226003504561e-15!GO:0016462;pyrophosphatase activity;3.96486896690965e-15!GO:0009058;biosynthetic process;4.29942626974657e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.49992536854954e-15!GO:0017111;nucleoside-triphosphatase activity;5.71364436758545e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;6.51572196752812e-15!GO:0015630;microtubule cytoskeleton;1.20878476581759e-14!GO:0006464;protein modification process;1.48090474373316e-14!GO:0044249;cellular biosynthetic process;1.90143485434196e-14!GO:0043687;post-translational protein modification;4.2434229591689e-14!GO:0005743;mitochondrial inner membrane;7.59486282397112e-14!GO:0017076;purine nucleotide binding;1.24746722268213e-13!GO:0005746;mitochondrial respiratory chain;3.03319136834027e-13!GO:0050136;NADH dehydrogenase (quinone) activity;6.6731610273459e-13!GO:0003954;NADH dehydrogenase activity;6.6731610273459e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;6.6731610273459e-13!GO:0012505;endomembrane system;7.9813903717442e-13!GO:0015934;large ribosomal subunit;9.87393225063e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;4.68945924146587e-12!GO:0006511;ubiquitin-dependent protein catabolic process;4.77574108738438e-12!GO:0022618;protein-RNA complex assembly;4.81680673237081e-12!GO:0031965;nuclear membrane;6.3917693884457e-12!GO:0019941;modification-dependent protein catabolic process;8.19860071807967e-12!GO:0043632;modification-dependent macromolecule catabolic process;8.19860071807967e-12!GO:0044257;cellular protein catabolic process;1.22159668736493e-11!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.31979145944683e-11!GO:0007399;nervous system development;1.52753329557412e-11!GO:0048193;Golgi vesicle transport;1.66145176327068e-11!GO:0032559;adenyl ribonucleotide binding;1.74830796325517e-11!GO:0015935;small ribosomal subunit;1.79161894176389e-11!GO:0005524;ATP binding;2.5098603401408e-11!GO:0006333;chromatin assembly or disassembly;2.86804797821684e-11!GO:0008135;translation factor activity, nucleic acid binding;4.65632654757749e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.78846264610676e-11!GO:0042773;ATP synthesis coupled electron transport;4.78846264610676e-11!GO:0030964;NADH dehydrogenase complex (quinone);5.74970381368941e-11!GO:0045271;respiratory chain complex I;5.74970381368941e-11!GO:0005747;mitochondrial respiratory chain complex I;5.74970381368941e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);6.20357048921986e-11!GO:0008639;small protein conjugating enzyme activity;6.25994113918153e-11!GO:0004842;ubiquitin-protein ligase activity;8.66500087274981e-11!GO:0006457;protein folding;9.04210101658359e-11!GO:0007049;cell cycle;9.99845560756748e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.37987154106724e-10!GO:0005694;chromosome;1.43782305660267e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;2.09869685554838e-10!GO:0000375;RNA splicing, via transesterification reactions;2.09869685554838e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.09869685554838e-10!GO:0008134;transcription factor binding;2.09869685554838e-10!GO:0006605;protein targeting;5.87283161841936e-10!GO:0008565;protein transporter activity;7.25898009023153e-10!GO:0019787;small conjugating protein ligase activity;7.79458852051724e-10!GO:0044453;nuclear membrane part;7.93093797415465e-10!GO:0031982;vesicle;9.13865657300942e-10!GO:0005635;nuclear envelope;9.70526515520708e-10!GO:0030554;adenyl nucleotide binding;1.03841139639504e-09!GO:0044431;Golgi apparatus part;1.10983521190745e-09!GO:0065004;protein-DNA complex assembly;1.68573773997281e-09!GO:0044265;cellular macromolecule catabolic process;1.78379188240981e-09!GO:0031410;cytoplasmic vesicle;2.69872884734233e-09!GO:0044427;chromosomal part;2.98726980142136e-09!GO:0031980;mitochondrial lumen;3.35581965889762e-09!GO:0005759;mitochondrial matrix;3.35581965889762e-09!GO:0006913;nucleocytoplasmic transport;3.35581965889762e-09!GO:0050794;regulation of cellular process;3.6366839015815e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.82073465847261e-09!GO:0016568;chromatin modification;4.88955041282659e-09!GO:0007010;cytoskeleton organization and biogenesis;5.39417896875888e-09!GO:0031988;membrane-bound vesicle;5.65749147616658e-09!GO:0005643;nuclear pore;6.25383226860381e-09!GO:0051169;nuclear transport;6.94454641706387e-09!GO:0045045;secretory pathway;7.70140437214334e-09!GO:0000785;chromatin;7.88816345079856e-09!GO:0006793;phosphorus metabolic process;8.36933551595463e-09!GO:0006796;phosphate metabolic process;8.36933551595463e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.06983546146435e-08!GO:0006403;RNA localization;1.20525735048143e-08!GO:0005730;nucleolus;1.20525735048143e-08!GO:0030163;protein catabolic process;1.44756269188811e-08!GO:0016023;cytoplasmic membrane-bound vesicle;1.44756269188811e-08!GO:0051082;unfolded protein binding;1.52807460681066e-08!GO:0016881;acid-amino acid ligase activity;1.64240069112908e-08!GO:0019829;cation-transporting ATPase activity;2.02848277128624e-08!GO:0050657;nucleic acid transport;2.28333741344291e-08!GO:0051236;establishment of RNA localization;2.28333741344291e-08!GO:0050658;RNA transport;2.28333741344291e-08!GO:0005874;microtubule;2.32165213557587e-08!GO:0006974;response to DNA damage stimulus;2.5876747209268e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.64544789757412e-08!GO:0015631;tubulin binding;2.66996048801974e-08!GO:0043285;biopolymer catabolic process;3.19799574485419e-08!GO:0003743;translation initiation factor activity;3.91845248517544e-08!GO:0016604;nuclear body;4.41312196172373e-08!GO:0050789;regulation of biological process;4.86751613816996e-08!GO:0032446;protein modification by small protein conjugation;6.75527363909748e-08!GO:0000139;Golgi membrane;9.68157408728831e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.00288141592891e-07!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.22889009198863e-07!GO:0022402;cell cycle process;1.27618043452091e-07!GO:0016607;nuclear speck;1.28312355218652e-07!GO:0000502;proteasome complex (sensu Eukaryota);1.28312355218652e-07!GO:0016887;ATPase activity;1.31098756695456e-07!GO:0006334;nucleosome assembly;1.31236525859634e-07!GO:0030135;coated vesicle;1.38306125831187e-07!GO:0006281;DNA repair;1.38306125831187e-07!GO:0006446;regulation of translational initiation;1.5862212439336e-07!GO:0019222;regulation of metabolic process;1.66986503649172e-07!GO:0016567;protein ubiquitination;1.96837611976919e-07!GO:0042623;ATPase activity, coupled;1.96837611976919e-07!GO:0006413;translational initiation;2.246577884642e-07!GO:0015986;ATP synthesis coupled proton transport;2.3925168931101e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.3925168931101e-07!GO:0048770;pigment granule;3.11758684326433e-07!GO:0042470;melanosome;3.11758684326433e-07!GO:0031497;chromatin assembly;3.535702609761e-07!GO:0004386;helicase activity;4.55289916820108e-07!GO:0006350;transcription;5.03129618572274e-07!GO:0005761;mitochondrial ribosome;6.16686258594995e-07!GO:0000313;organellar ribosome;6.16686258594995e-07!GO:0016310;phosphorylation;8.30518423678675e-07!GO:0048475;coated membrane;8.59182256479394e-07!GO:0030117;membrane coat;8.59182256479394e-07!GO:0051028;mRNA transport;8.71711533326902e-07!GO:0009057;macromolecule catabolic process;1.09367834365414e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.36422408925864e-06!GO:0008287;protein serine/threonine phosphatase complex;1.41412256455171e-06!GO:0009141;nucleoside triphosphate metabolic process;1.53421300657482e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.55261017709128e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.55261017709128e-06!GO:0003924;GTPase activity;1.86960246587519e-06!GO:0009150;purine ribonucleotide metabolic process;1.99789808371136e-06!GO:0046930;pore complex;2.19397821397421e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.22434029382869e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.22434029382869e-06!GO:0006163;purine nucleotide metabolic process;2.34693559093985e-06!GO:0003712;transcription cofactor activity;2.50200385711605e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.50283038633726e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.50283038633726e-06!GO:0009259;ribonucleotide metabolic process;2.84401348511942e-06!GO:0005813;centrosome;3.23228602998205e-06!GO:0008092;cytoskeletal protein binding;3.34088569663584e-06!GO:0051186;cofactor metabolic process;3.57747470577163e-06!GO:0009152;purine ribonucleotide biosynthetic process;3.81814747319845e-06!GO:0046034;ATP metabolic process;3.91746351370449e-06!GO:0007017;microtubule-based process;3.94754613796979e-06!GO:0009060;aerobic respiration;4.05116942127454e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;4.11645392247239e-06!GO:0006164;purine nucleotide biosynthetic process;4.67012877206057e-06!GO:0006461;protein complex assembly;4.88799927979094e-06!GO:0006754;ATP biosynthetic process;4.9323588257318e-06!GO:0006753;nucleoside phosphate metabolic process;4.9323588257318e-06!GO:0008270;zinc ion binding;4.95270856117251e-06!GO:0008017;microtubule binding;4.95270856117251e-06!GO:0007264;small GTPase mediated signal transduction;5.12773672164584e-06!GO:0045259;proton-transporting ATP synthase complex;6.15666408494995e-06!GO:0032774;RNA biosynthetic process;6.27356944446782e-06!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.47340941739623e-06!GO:0017038;protein import;6.84099686486656e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;6.84885746795131e-06!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.06064068341605e-06!GO:0006351;transcription, DNA-dependent;7.67413302440081e-06!GO:0010468;regulation of gene expression;7.75268734331156e-06!GO:0045333;cellular respiration;8.08462482382962e-06!GO:0005815;microtubule organizing center;1.01375721834608e-05!GO:0009260;ribonucleotide biosynthetic process;1.11048823408685e-05!GO:0005905;coated pit;1.29101326564997e-05!GO:0051726;regulation of cell cycle;1.35045386240388e-05!GO:0031323;regulation of cellular metabolic process;1.38065430868462e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.53523022366396e-05!GO:0006260;DNA replication;1.55322892447324e-05!GO:0000245;spliceosome assembly;1.58170177583973e-05!GO:0005875;microtubule associated complex;1.84723872261126e-05!GO:0003697;single-stranded DNA binding;1.88443291170054e-05!GO:0000074;regulation of progression through cell cycle;1.89001545301815e-05!GO:0043005;neuron projection;2.00316736588926e-05!GO:0030120;vesicle coat;2.36434564771325e-05!GO:0030662;coated vesicle membrane;2.36434564771325e-05!GO:0043566;structure-specific DNA binding;2.36434564771325e-05!GO:0030532;small nuclear ribonucleoprotein complex;2.48476999190583e-05!GO:0005525;GTP binding;2.71464224782698e-05!GO:0048471;perinuclear region of cytoplasm;3.21389166590565e-05!GO:0032940;secretion by cell;3.41238324900606e-05!GO:0000151;ubiquitin ligase complex;3.4666186400219e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;3.68955450471286e-05!GO:0004812;aminoacyl-tRNA ligase activity;3.68955450471286e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;3.68955450471286e-05!GO:0065002;intracellular protein transport across a membrane;3.74411818857871e-05!GO:0005083;small GTPase regulator activity;3.78961686863393e-05!GO:0045449;regulation of transcription;3.83540494958062e-05!GO:0030182;neuron differentiation;4.06787345818613e-05!GO:0006732;coenzyme metabolic process;4.07732373099197e-05!GO:0005798;Golgi-associated vesicle;4.11555656483755e-05!GO:0005768;endosome;4.18328464243254e-05!GO:0030030;cell projection organization and biogenesis;4.38447295374009e-05!GO:0048858;cell projection morphogenesis;4.38447295374009e-05!GO:0032990;cell part morphogenesis;4.38447295374009e-05!GO:0000902;cell morphogenesis;4.62351535477397e-05!GO:0032989;cellular structure morphogenesis;4.62351535477397e-05!GO:0008026;ATP-dependent helicase activity;4.72209036327574e-05!GO:0030036;actin cytoskeleton organization and biogenesis;4.80418423495702e-05!GO:0015078;hydrogen ion transmembrane transporter activity;8.12235567902297e-05!GO:0016363;nuclear matrix;8.12235567902297e-05!GO:0045786;negative regulation of progression through cell cycle;8.24379601746331e-05!GO:0004674;protein serine/threonine kinase activity;8.28604121648792e-05!GO:0044248;cellular catabolic process;8.63810020059712e-05!GO:0006355;regulation of transcription, DNA-dependent;8.65111120503684e-05!GO:0006099;tricarboxylic acid cycle;8.73577173717659e-05!GO:0046356;acetyl-CoA catabolic process;8.73577173717659e-05!GO:0032561;guanyl ribonucleotide binding;0.000109272871337361!GO:0019001;guanyl nucleotide binding;0.000109272871337361!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000109951407467988!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000111585984511927!GO:0048699;generation of neurons;0.000112789072013856!GO:0043038;amino acid activation;0.000113032880975456!GO:0006418;tRNA aminoacylation for protein translation;0.000113032880975456!GO:0043039;tRNA aminoacylation;0.000113032880975456!GO:0030427;site of polarized growth;0.000119413336701764!GO:0016740;transferase activity;0.000120354325448597!GO:0000278;mitotic cell cycle;0.000134822754679001!GO:0003729;mRNA binding;0.000141107917921033!GO:0043623;cellular protein complex assembly;0.00014833564745555!GO:0006888;ER to Golgi vesicle-mediated transport;0.000153032746164339!GO:0030426;growth cone;0.000153056534768282!GO:0006366;transcription from RNA polymerase II promoter;0.000155687581842447!GO:0006606;protein import into nucleus;0.000167731456605646!GO:0022008;neurogenesis;0.000173177247689417!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.0001832719308536!GO:0051427;hormone receptor binding;0.000183542556988321!GO:0051168;nuclear export;0.000192785063507059!GO:0006613;cotranslational protein targeting to membrane;0.000217445442938182!GO:0000904;cellular morphogenesis during differentiation;0.000231318462358815!GO:0044440;endosomal part;0.00023592435314181!GO:0010008;endosome membrane;0.00023592435314181!GO:0030136;clathrin-coated vesicle;0.000246782063177097!GO:0051170;nuclear import;0.000259814950084134!GO:0048666;neuron development;0.000297510606897933!GO:0031175;neurite development;0.00030144804003822!GO:0042254;ribosome biogenesis and assembly;0.000301606444230094!GO:0006752;group transfer coenzyme metabolic process;0.00032865444145287!GO:0003677;DNA binding;0.000335715541640526!GO:0000159;protein phosphatase type 2A complex;0.000339791079845348!GO:0006084;acetyl-CoA metabolic process;0.000340355780414773!GO:0035257;nuclear hormone receptor binding;0.000346857216629416!GO:0019899;enzyme binding;0.000353747802161799!GO:0048667;neuron morphogenesis during differentiation;0.00036728623863128!GO:0048812;neurite morphogenesis;0.00036728623863128!GO:0006414;translational elongation;0.000397719958289526!GO:0003713;transcription coactivator activity;0.000401670354648768!GO:0030029;actin filament-based process;0.000408303367841116!GO:0031252;leading edge;0.000415429544302585!GO:0009109;coenzyme catabolic process;0.000422175341940529!GO:0005769;early endosome;0.000422194179345935!GO:0030027;lamellipodium;0.000455219001599937!GO:0030695;GTPase regulator activity;0.000460906330445515!GO:0051188;cofactor biosynthetic process;0.000469656225679429!GO:0005667;transcription factor complex;0.000474154317421242!GO:0003682;chromatin binding;0.000536953731633096!GO:0009719;response to endogenous stimulus;0.000552239212417855!GO:0008601;protein phosphatase type 2A regulator activity;0.000556152103009501!GO:0009055;electron carrier activity;0.000579574624411317!GO:0016311;dephosphorylation;0.000629043330447861!GO:0051301;cell division;0.000630751555430947!GO:0016044;membrane organization and biogenesis;0.000655047632017369!GO:0007409;axonogenesis;0.000698431330954348!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000783722690667248!GO:0015399;primary active transmembrane transporter activity;0.000783722690667248!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000820175827027812!GO:0030118;clathrin coat;0.000839741952140154!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000850746106835759!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000860901731700175!GO:0051128;regulation of cellular component organization and biogenesis;0.000981917502666782!GO:0048523;negative regulation of cellular process;0.000995877058541646!GO:0019717;synaptosome;0.00112337737798254!GO:0019208;phosphatase regulator activity;0.0012153748694212!GO:0005793;ER-Golgi intermediate compartment;0.00122553582194734!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00122788085197403!GO:0006399;tRNA metabolic process;0.0012702735402577!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00128281824240378!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00129395789880234!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00129395789880234!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00129395789880234!GO:0065007;biological regulation;0.00129733834229622!GO:0051087;chaperone binding;0.00139215210814586!GO:0000059;protein import into nucleus, docking;0.00145514652451971!GO:0016301;kinase activity;0.00145514652451971!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00148337146752969!GO:0006891;intra-Golgi vesicle-mediated transport;0.00154917049625575!GO:0009108;coenzyme biosynthetic process;0.00189664589372896!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.00203086159876613!GO:0016564;transcription repressor activity;0.00212639938880859!GO:0000786;nucleosome;0.00231965591559126!GO:0046914;transition metal ion binding;0.00238233355668731!GO:0006470;protein amino acid dephosphorylation;0.00238873715806764!GO:0003724;RNA helicase activity;0.00241612637850503!GO:0006607;NLS-bearing substrate import into nucleus;0.00251422937396026!GO:0004721;phosphoprotein phosphatase activity;0.00257338708483454!GO:0051187;cofactor catabolic process;0.00258237322840461!GO:0030425;dendrite;0.00271839790620514!GO:0008654;phospholipid biosynthetic process;0.00273233628823296!GO:0003690;double-stranded DNA binding;0.00292943587767858!GO:0000087;M phase of mitotic cell cycle;0.00302126501262446!GO:0051056;regulation of small GTPase mediated signal transduction;0.00313808309276486!GO:0005770;late endosome;0.00316578656276072!GO:0016481;negative regulation of transcription;0.00335250094724586!GO:0006892;post-Golgi vesicle-mediated transport;0.00336334171001055!GO:0007417;central nervous system development;0.0034917544118536!GO:0022403;cell cycle phase;0.00359615877040654!GO:0005783;endoplasmic reticulum;0.00360769744575135!GO:0007265;Ras protein signal transduction;0.00370243579754473!GO:0031072;heat shock protein binding;0.00387551510918753!GO:0006364;rRNA processing;0.00387551510918753!GO:0048489;synaptic vesicle transport;0.00412831260225798!GO:0050767;regulation of neurogenesis;0.00424605652785378!GO:0003746;translation elongation factor activity;0.00433384903948004!GO:0008022;protein C-terminus binding;0.00449421651924094!GO:0007067;mitosis;0.00457367362582637!GO:0003899;DNA-directed RNA polymerase activity;0.00476067980274108!GO:0043492;ATPase activity, coupled to movement of substances;0.0049155202758421!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00491983838015193!GO:0031901;early endosome membrane;0.0049961822343582!GO:0019888;protein phosphatase regulator activity;0.00500792968527396!GO:0008250;oligosaccharyl transferase complex;0.00510632126681364!GO:0031124;mRNA 3'-end processing;0.00515643819505472!GO:0004576;oligosaccharyl transferase activity;0.00521783144976619!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00524365299494386!GO:0003684;damaged DNA binding;0.00558995551159574!GO:0005637;nuclear inner membrane;0.00560589317655459!GO:0030660;Golgi-associated vesicle membrane;0.00560589317655459!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00589601652882201!GO:0016584;nucleosome positioning;0.00639280378211374!GO:0030133;transport vesicle;0.00663337120039108!GO:0006897;endocytosis;0.00672809739573646!GO:0010324;membrane invagination;0.00672809739573646!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00679087009023977!GO:0006261;DNA-dependent DNA replication;0.0073547332003277!GO:0006338;chromatin remodeling;0.00746985310447511!GO:0005819;spindle;0.00749145863746494!GO:0022406;membrane docking;0.00756507699157431!GO:0048278;vesicle docking;0.00756507699157431!GO:0016072;rRNA metabolic process;0.00769439551442518!GO:0008139;nuclear localization sequence binding;0.00769439551442518!GO:0007269;neurotransmitter secretion;0.00771633755680994!GO:0005839;proteasome core complex (sensu Eukaryota);0.00777353543457616!GO:0030137;COPI-coated vesicle;0.00778731402880855!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00786178330640777!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00786178330640777!GO:0030658;transport vesicle membrane;0.00790873658881734!GO:0000209;protein polyubiquitination;0.00792914590948084!GO:0048167;regulation of synaptic plasticity;0.0079536715655696!GO:0009892;negative regulation of metabolic process;0.00795954013205614!GO:0005762;mitochondrial large ribosomal subunit;0.00810337795305279!GO:0000315;organellar large ribosomal subunit;0.00810337795305279!GO:0009117;nucleotide metabolic process;0.00841542299411036!GO:0005048;signal sequence binding;0.00863455935705541!GO:0000118;histone deacetylase complex;0.00885005216877888!GO:0006650;glycerophospholipid metabolic process;0.00887152136944974!GO:0005869;dynactin complex;0.00887653256429107!GO:0051246;regulation of protein metabolic process;0.00891300964078863!GO:0016585;chromatin remodeling complex;0.0091308044904447!GO:0004722;protein serine/threonine phosphatase activity;0.00926437435618485!GO:0006405;RNA export from nucleus;0.00959831121875135!GO:0035258;steroid hormone receptor binding;0.00972652297939902!GO:0019904;protein domain specific binding;0.0109563647089357!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0110943789448477!GO:0006612;protein targeting to membrane;0.0117039594307257!GO:0003730;mRNA 3'-UTR binding;0.01187044678818!GO:0006402;mRNA catabolic process;0.0119111582826074!GO:0040029;regulation of gene expression, epigenetic;0.0119383913382835!GO:0046578;regulation of Ras protein signal transduction;0.0120895144225468!GO:0048519;negative regulation of biological process;0.0123353964270604!GO:0006383;transcription from RNA polymerase III promoter;0.0123600402489513!GO:0046467;membrane lipid biosynthetic process;0.0128074898371621!GO:0007411;axon guidance;0.0128841636920534!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0130103692023442!GO:0016197;endosome transport;0.013132568657488!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0136384292148132!GO:0031324;negative regulation of cellular metabolic process;0.0136781861720758!GO:0006904;vesicle docking during exocytosis;0.0142534816446793!GO:0031123;RNA 3'-end processing;0.0146174241612321!GO:0048487;beta-tubulin binding;0.0146174241612321!GO:0015980;energy derivation by oxidation of organic compounds;0.0147330037327388!GO:0045892;negative regulation of transcription, DNA-dependent;0.0149109098313812!GO:0004298;threonine endopeptidase activity;0.0152448201620791!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0154312731246521!GO:0051252;regulation of RNA metabolic process;0.0154363921387193!GO:0016050;vesicle organization and biogenesis;0.0154590499687797!GO:0007019;microtubule depolymerization;0.0154835237026592!GO:0051920;peroxiredoxin activity;0.0156148626241641!GO:0030031;cell projection biogenesis;0.0157193402567442!GO:0006595;polyamine metabolic process;0.015999427337352!GO:0007005;mitochondrion organization and biogenesis;0.0162015103335842!GO:0048500;signal recognition particle;0.0164148552388913!GO:0016779;nucleotidyltransferase activity;0.0167363667790754!GO:0003779;actin binding;0.0168438412073627!GO:0030521;androgen receptor signaling pathway;0.0171248922385878!GO:0005521;lamin binding;0.0171554718107048!GO:0000339;RNA cap binding;0.0176623003145719!GO:0030132;clathrin coat of coated pit;0.0184004038689264!GO:0050803;regulation of synapse structure and activity;0.0184327182085915!GO:0000792;heterochromatin;0.0188798799063915!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.0197477887702433!GO:0019198;transmembrane receptor protein phosphatase activity;0.0197477887702433!GO:0008088;axon cargo transport;0.0198715603270842!GO:0003714;transcription corepressor activity;0.0199101823627471!GO:0005885;Arp2/3 protein complex;0.0200219499437673!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0201854555203351!GO:0000279;M phase;0.0205353805233116!GO:0007018;microtubule-based movement;0.0206228075175344!GO:0019894;kinesin binding;0.0216047235412176!GO:0008021;synaptic vesicle;0.0220484674805727!GO:0006352;transcription initiation;0.0221817373105459!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0223178498143164!GO:0000314;organellar small ribosomal subunit;0.0223732425386462!GO:0005763;mitochondrial small ribosomal subunit;0.0223732425386462!GO:0006810;transport;0.0223825552791431!GO:0003711;transcription elongation regulator activity;0.0223852200541954!GO:0030258;lipid modification;0.0226668982314498!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0231329454695077!GO:0045047;protein targeting to ER;0.0231329454695077!GO:0006378;mRNA polyadenylation;0.0231329454695077!GO:0005868;cytoplasmic dynein complex;0.0232557328473995!GO:0008186;RNA-dependent ATPase activity;0.0232857186063753!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0232857186063753!GO:0043025;cell soma;0.0232857186063753!GO:0005938;cell cortex;0.0233483028808875!GO:0012506;vesicle membrane;0.0235854573210411!GO:0005684;U2-dependent spliceosome;0.0237035869195382!GO:0008286;insulin receptor signaling pathway;0.0237223870431345!GO:0030175;filopodium;0.0237223870431345!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0246624136074004!GO:0005657;replication fork;0.0249521561140754!GO:0006611;protein export from nucleus;0.0249829618396258!GO:0042585;germinal vesicle;0.0252041498899216!GO:0016126;sterol biosynthetic process;0.0253416172829329!GO:0008312;7S RNA binding;0.0258780578613095!GO:0008154;actin polymerization and/or depolymerization;0.0259554800957309!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0260714310039151!GO:0044432;endoplasmic reticulum part;0.0262881538148223!GO:0005791;rough endoplasmic reticulum;0.0264130705225429!GO:0016791;phosphoric monoester hydrolase activity;0.0268935625575437!GO:0030032;lamellipodium biogenesis;0.0272206326021613!GO:0022890;inorganic cation transmembrane transporter activity;0.0287998263598167!GO:0030125;clathrin vesicle coat;0.0290697046273525!GO:0030665;clathrin coated vesicle membrane;0.0290697046273525!GO:0043681;protein import into mitochondrion;0.0292158242336093!GO:0005832;chaperonin-containing T-complex;0.0311793153684698!GO:0008276;protein methyltransferase activity;0.0324776850269557!GO:0000776;kinetochore;0.0333333723496694!GO:0005876;spindle microtubule;0.0334796761893355!GO:0050770;regulation of axonogenesis;0.034256242837332!GO:0043087;regulation of GTPase activity;0.0342753486398497!GO:0018196;peptidyl-asparagine modification;0.0343374624801933!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0343374624801933!GO:0051287;NAD binding;0.0345907858575462!GO:0005853;eukaryotic translation elongation factor 1 complex;0.0345907858575462!GO:0009165;nucleotide biosynthetic process;0.0346396826916537!GO:0043284;biopolymer biosynthetic process;0.0348326015683844!GO:0006695;cholesterol biosynthetic process;0.034944846592288!GO:0050811;GABA receptor binding;0.0349677771752817!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0355287771132357!GO:0019902;phosphatase binding;0.0361550399346811!GO:0030384;phosphoinositide metabolic process;0.0365271805888418!GO:0044448;cell cortex part;0.0367582352050469!GO:0030119;AP-type membrane coat adaptor complex;0.0367817837974827!GO:0005856;cytoskeleton;0.0378746322551636!GO:0044433;cytoplasmic vesicle part;0.0381017432358216!GO:0046474;glycerophospholipid biosynthetic process;0.0384955856468254!GO:0031301;integral to organelle membrane;0.0386482769358755!GO:0030134;ER to Golgi transport vesicle;0.0387320404057408!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0396137466327727!GO:0007266;Rho protein signal transduction;0.0401669999271736!GO:0006818;hydrogen transport;0.0404170613861157!GO:0006301;postreplication repair;0.0409134060601732!GO:0008097;5S rRNA binding;0.0414837071001006!GO:0030867;rough endoplasmic reticulum membrane;0.0415677487309747!GO:0031371;ubiquitin conjugating enzyme complex;0.0419166522320627!GO:0019783;small conjugating protein-specific protease activity;0.0419166522320627!GO:0030663;COPI coated vesicle membrane;0.0425141820842201!GO:0030126;COPI vesicle coat;0.0425141820842201!GO:0004221;ubiquitin thiolesterase activity;0.042926711541202!GO:0043021;ribonucleoprotein binding;0.043213981671723!GO:0031114;regulation of microtubule depolymerization;0.0438616518634307!GO:0007026;negative regulation of microtubule depolymerization;0.0438616518634307!GO:0004672;protein kinase activity;0.0439300078960738!GO:0031902;late endosome membrane;0.0441933718324297!GO:0050681;androgen receptor binding;0.0442090154039574!GO:0005881;cytoplasmic microtubule;0.0442606998864824!GO:0030127;COPII vesicle coat;0.0446738293411093!GO:0012507;ER to Golgi transport vesicle membrane;0.0446738293411093!GO:0001578;microtubule bundle formation;0.0450275629053596!GO:0008180;signalosome;0.0450317573055787!GO:0030518;steroid hormone receptor signaling pathway;0.0453782606899946!GO:0005784;translocon complex;0.0462809264517504!GO:0030911;TPR domain binding;0.0472037183411117!GO:0051539;4 iron, 4 sulfur cluster binding;0.0482407359941171!GO:0042734;presynaptic membrane;0.0483334420396006!GO:0007420;brain development;0.0488033899824515!GO:0006302;double-strand break repair;0.0498205751159884 | |||
|sample_id=10072 | |sample_id=10072 | ||
|sample_note= | |sample_note= |
Revision as of 20:17, 25 June 2012
Name: | parietal lobe, fetal, donor1 |
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Species: | Human (Homo sapiens) |
Library ID: | {{{library_id}}} |
Sample type: | {{{sample_category}}} |
Genomic View: | UCSC |
CAGEd-oPOSSUM: | link |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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Download raw sequence, BAM & CTSS | ||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
no result for this sample
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11782
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs11782
Novel motif | Logo | P-value |
---|---|---|
1 | 1 | 0.0913 |
10 | 10 | 0.138 |
100 | 100 | 0.608 |
101 | 101 | 0.62 |
102 | 102 | 0.857 |
103 | 103 | 0.0509 |
104 | 104 | 0.0913 |
105 | 105 | 0.144 |
106 | 106 | 0.0295 |
107 | 107 | 0.0954 |
108 | 108 | 0.868 |
109 | 109 | 4.41781e-4 |
11 | 11 | 0.0397 |
110 | 110 | 0.17 |
111 | 111 | 0.388 |
112 | 112 | 0.249 |
113 | 113 | 0.329 |
114 | 114 | 0.075 |
115 | 115 | 0.947 |
116 | 116 | 0.239 |
117 | 117 | 0.0322 |
118 | 118 | 0.268 |
119 | 119 | 0.35 |
12 | 12 | 0.506 |
120 | 120 | 0.282 |
121 | 121 | 0.333 |
122 | 122 | 0.496 |
123 | 123 | 0.0991 |
124 | 124 | 0.317 |
125 | 125 | 0.46 |
126 | 126 | 0.0193 |
127 | 127 | 0.179 |
128 | 128 | 0.18 |
129 | 129 | 0.348 |
13 | 13 | 0.00632 |
130 | 130 | 0.0511 |
131 | 131 | 0.646 |
132 | 132 | 0.771 |
133 | 133 | 0.298 |
134 | 134 | 0.808 |
135 | 135 | 0.699 |
136 | 136 | 0.00528 |
137 | 137 | 0.266 |
138 | 138 | 0.866 |
139 | 139 | 0.0711 |
14 | 14 | 0.68 |
140 | 140 | 0.405 |
141 | 141 | 0.57 |
142 | 142 | 0.802 |
143 | 143 | 0.0124 |
144 | 144 | 0.846 |
145 | 145 | 0.368 |
146 | 146 | 0.392 |
147 | 147 | 0.7 |
148 | 148 | 0.026 |
149 | 149 | 0.124 |
15 | 15 | 0.113 |
150 | 150 | 0.249 |
151 | 151 | 0.39 |
152 | 152 | 0.0346 |
153 | 153 | 0.813 |
154 | 154 | 0.538 |
155 | 155 | 0.783 |
156 | 156 | 0.43 |
157 | 157 | 0.444 |
158 | 158 | 0.381 |
159 | 159 | 0.105 |
16 | 16 | 0.0323 |
160 | 160 | 0.241 |
161 | 161 | 0.208 |
162 | 162 | 0.445 |
163 | 163 | 0.583 |
164 | 164 | 0.116 |
165 | 165 | 0.219 |
166 | 166 | 0.813 |
167 | 167 | 0.995 |
168 | 168 | 0.0885 |
169 | 169 | 0.0105 |
17 | 17 | 0.096 |
18 | 18 | 0.167 |
19 | 19 | 0.121 |
2 | 2 | 0.471 |
20 | 20 | 0.534 |
21 | 21 | 0.231 |
22 | 22 | 0.0793 |
23 | 23 | 0.204 |
24 | 24 | 0.0139 |
25 | 25 | 0.411 |
26 | 26 | 0.0263 |
27 | 27 | 0.412 |
28 | 28 | 0.747 |
29 | 29 | 0.0645 |
3 | 3 | 0.0804 |
30 | 30 | 0.58 |
31 | 31 | 0.578 |
32 | 32 | 0.0428 |
33 | 33 | 0.144 |
34 | 34 | 0.472 |
35 | 35 | 0.619 |
36 | 36 | 0.219 |
37 | 37 | 0.0164 |
38 | 38 | 0.239 |
39 | 39 | 0.249 |
4 | 4 | 0.93 |
40 | 40 | 0.0395 |
41 | 41 | 0.235 |
42 | 42 | 0.236 |
43 | 43 | 0.121 |
44 | 44 | 0.211 |
45 | 45 | 0.478 |
46 | 46 | 0.245 |
47 | 47 | 0.101 |
48 | 48 | 0.108 |
49 | 49 | 0.219 |
5 | 5 | 0.317 |
50 | 50 | 0.318 |
51 | 51 | 0.325 |
52 | 52 | 0.32 |
53 | 53 | 0.963 |
54 | 54 | 0.255 |
55 | 55 | 0.934 |
56 | 56 | 0.4 |
57 | 57 | 0.675 |
58 | 58 | 0.274 |
59 | 59 | 0.0245 |
6 | 6 | 0.929 |
60 | 60 | 0.0583 |
61 | 61 | 0.0559 |
62 | 62 | 0.189 |
63 | 63 | 0.144 |
64 | 64 | 0.472 |
65 | 65 | 0.172 |
66 | 66 | 0.292 |
67 | 67 | 0.73 |
68 | 68 | 0.0994 |
69 | 69 | 0.747 |
7 | 7 | 0.0709 |
70 | 70 | 0.0367 |
71 | 71 | 0.0273 |
72 | 72 | 0.157 |
73 | 73 | 0.0124 |
74 | 74 | 0.902 |
75 | 75 | 0.0565 |
76 | 76 | 0.593 |
77 | 77 | 0.082 |
78 | 78 | 0.0179 |
79 | 79 | 0.443 |
8 | 8 | 0.12 |
80 | 80 | 0.115 |
81 | 81 | 0.601 |
82 | 82 | 0.359 |
83 | 83 | 0.00917 |
84 | 84 | 0.902 |
85 | 85 | 0.0869 |
86 | 86 | 0.255 |
87 | 87 | 2.05066e-4 |
88 | 88 | 0.769 |
89 | 89 | 0.15 |
9 | 9 | 0.252 |
90 | 90 | 0.394 |
91 | 91 | 0.924 |
92 | 92 | 0.299 |
93 | 93 | 0.481 |
94 | 94 | 0.148 |
95 | 95 | 0.00719 |
96 | 96 | 0.345 |
97 | 97 | 0.76 |
98 | 98 | 0.268 |
99 | 99 | 0.562 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs11782
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000004 tissue sample
FF:0000210 human sample
FF:0010072 human parietal lobe - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0001872 (parietal lobe)
0000483 (epithelium)
0000956 (cerebral cortex)
0000033 (head)
0000479 (tissue)
0002346 (neurectoderm)
0000064 (organ part)
0000073 (regional part of nervous system)
0004121 (ectoderm-derived structure)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0000025 (tube)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0002020 (gray matter)
0002791 (regional part of telencephalon)
0003528 (brain grey matter)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0002616 (regional part of brain)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000119 (cell layer)
0005291 (embryonic tissue)
0002780 (regional part of forebrain)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0001017 (central nervous system)
0001016 (nervous system)
0000153 (anterior region of body)
0007811 (craniocervical region)
0000924 (ectoderm)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)
0003075 (neural plate)
0003056 (pre-chordal neural plate)
0001049 (neural tube)
0006238 (future brain)
0006601 (presumptive ectoderm)
0005068 (neural rod)
0006241 (future spinal cord)
0003080 (anterior neural tube)
0006240 (future forebrain)
0007284 (presumptive neural plate)
0007135 (neural keel)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA