FFCP PHASE1:Hg19::chr10:129797778..129797828,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr10:129797778..129797828,+ | |||
|id=chr10:129797778..129797828,+ | |||
|ontology_enrichment_celltype=CL:0005020!1.04e-07!6;CL:0002138!1.04e-07!6;CL:0005022!1.04e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.12e-19;82!UBERON:0006215;3.47e-10;3!UBERON:0006241;1.42e-09;3!UBERON:0003057;1.42e-09;3!UBERON:0010122;1.37e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-81!57;UBERON:0005068!1.87e-81!57;UBERON:0006241!1.87e-81!57;UBERON:0007135!1.87e-81!57;UBERON:0001017!4.95e-73!82;UBERON:0005743!3.45e-71!86;UBERON:0000073!1.93e-69!94;UBERON:0001016!1.93e-69!94;UBERON:0002616!1.22e-68!59;UBERON:0007023!4.21e-68!115;UBERON:0002780!5.49e-68!41;UBERON:0001890!5.49e-68!41;UBERON:0006240!5.49e-68!41;UBERON:0003080!4.40e-66!42;UBERON:0000955!1.17e-63!69;UBERON:0006238!1.17e-63!69;UBERON:0001893!5.43e-60!34;UBERON:0002020!1.15e-59!34;UBERON:0003528!1.15e-59!34;UBERON:0002791!5.57e-58!33;UBERON:0001869!7.17e-57!32;UBERON:0003075!4.52e-55!86;UBERON:0007284!4.52e-55!86;UBERON:0002346!8.16e-54!90;UBERON:0000956!2.55e-44!25;UBERON:0000203!2.55e-44!25;UBERON:0003056!8.59e-44!61;UBERON:0002619!1.47e-43!22;UBERON:0001950!6.52e-40!20;UBERON:0000153!3.30e-36!129;UBERON:0007811!3.30e-36!129;UBERON:0000033!1.39e-34!123;UBERON:0004121!6.23e-33!169;UBERON:0000924!7.02e-33!173;UBERON:0006601!7.02e-33!173;UBERON:0004111!4.98e-21!241;UBERON:0000477!1.18e-20!286;UBERON:0000025!2.18e-20!194;UBERON:0002420!6.28e-17!9;UBERON:0007245!6.28e-17!9;UBERON:0010009!6.28e-17!9;UBERON:0010011!6.28e-17!9;UBERON:0000454!6.28e-17!9;UBERON:0002308!1.96e-16!9;UBERON:0000125!1.96e-16!9;UBERON:0003076!4.25e-16!15;UBERON:0003057!4.25e-16!15;UBERON:0001871!9.19e-16!7;UBERON:0009663!2.99e-13!7;UBERON:0004732!4.33e-13!13;UBERON:0000200!7.27e-13!6;UBERON:0004733!1.14e-11!12;UBERON:0002028!1.14e-11!12;UBERON:0007277!1.14e-11!12;UBERON:0000483!1.59e-11!309;UBERON:0000119!3.03e-11!312;UBERON:0001872!6.29e-11!5;UBERON:0002298!6.89e-11!8;UBERON:0000349!7.51e-11!5;UBERON:0002021!1.05e-10!5;UBERON:0000064!1.56e-10!219;UBERON:0001894!2.12e-09!7;UBERON:0006222!2.12e-09!7;UBERON:0000369!7.52e-09!4;UBERON:0002435!7.52e-09!4;UBERON:0000204!7.52e-09!4;UBERON:0010082!7.52e-09!4;UBERON:0002465!4.71e-08!10;UBERON:0000475!5.71e-08!365;UBERON:0000467!6.87e-08!625;UBERON:0000480!7.76e-08!626;UBERON:0000468!1.54e-07!659;UBERON:0002680!1.79e-07!9;UBERON:0001895!1.79e-07!9;UBERON:0010092!1.79e-07!9;UBERON:0002771!4.19e-07!3;UBERON:0005383!6.32e-07!3;UBERON:0005382!6.32e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.67e-81;32!UBERON:0001893;2.59e-77;34!UBERON:0003528;6.49e-77;34!UBERON:0002020;6.49e-77;34!UBERON:0002791;5.04e-76;32!UBERON:0002619;1.96e-72;22!UBERON:0002780;1.79e-70;41!UBERON:0001890;1.79e-70;41!UBERON:0000956;9.23e-69;25!UBERON:0000203;9.23e-69;25!UBERON:0001950;2.96e-66;20!UBERON:0000073;8.82e-62;53!UBERON:0002616;8.82e-62;53!UBERON:0001017;2.29e-43;75!UBERON:0000955;6.56e-42;68!UBERON:0001016;8.76e-38;83!UBERON:0001871;1.73e-22;6!UBERON:0002420;4.66e-22;9!UBERON:0007245;4.66e-22;9!UBERON:0010009;4.66e-22;9!UBERON:0010011;4.66e-22;9!UBERON:0000454;4.66e-22;9!UBERON:0000125;2.71e-21;9!UBERON:0002308;2.71e-21;9!UBERON:0000200;1.50e-20;6!UBERON:0004732;9.86e-18;13!UBERON:0001872;3.12e-17;5!UBERON:0000349;4.19e-17;5!UBERON:0002021;6.64e-17;5!UBERON:0007023;1.87e-16;114!UBERON:0009663;4.79e-16;7!UBERON:0004733;2.02e-15;12!UBERON:0002028;2.02e-15;12!UBERON:0011216;1.61e-14;132!UBERON:0000369;9.61e-14;4!UBERON:0002435;9.61e-14;4!UBERON:0000204;9.61e-14;4!UBERON:0002298;9.59e-13;6!UBERON:0002680;4.04e-12;9!UBERON:0001895;4.04e-12;9!UBERON:0001870;4.04e-11;3!UBERON:0001894;5.94e-11;7!UBERON:0005383;1.51e-10;3!UBERON:0005382;1.51e-10;3!UBERON:0000988;4.84e-10;3!UBERON:0002240;1.42e-09;3!UBERON:0005174;1.42e-09;3!UBERON:0001137;1.42e-09;3!UBERON:0010314;2.58e-09;132!UBERON:0001876;7.07e-08;2!UBERON:0002702;7.31e-08;2!UBERON:0002771;7.81e-08;2!UBERON:0001954;1.02e-07;2!UBERON:0003022;1.02e-07;2!UBERON:0002421;1.02e-07;2!UBERON:0002600;1.02e-07;2!UBERON:0001873;1.37e-07;2!UBERON:0000007;2.23e-07;2!UBERON:0001897;5.42e-07;2!UBERON:0002148;5.42e-07;2!UBERON:0006331;5.42e-07;2!UBERON:0009662;5.42e-07;2!UBERON:0010225;5.42e-07;2!UBERON:0001875;8.35e-07;2!UBERON:0005162;8.35e-07;2!UBERON:0000122;8.35e-07;2!UBERON:0006514;8.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.43e-121,56;UBERON:0005068,7.43e-121,56;UBERON:0006241,7.43e-121,56;UBERON:0007135,7.43e-121,56;UBERON:0000073,2.03e-112,53;UBERON:0002616,2.03e-112,53;UBERON:0002780,1.25e-98,41;UBERON:0001890,1.25e-98,41;UBERON:0003080,1.25e-98,41;UBERON:0006240,1.25e-98,41;UBERON:0001017,2.26e-98,81;UBERON:0000955,1.05e-96,68;UBERON:0006238,1.05e-96,68;UBERON:0001016,4.81e-91,89;UBERON:0001869,1.11e-89,32;UBERON:0001893,1.39e-89,34;UBERON:0003528,4.62e-89,34;UBERON:0002020,4.62e-89,34;UBERON:0002791,1.91e-83,32;UBERON:0003075,8.03e-83,82;UBERON:0007284,8.03e-83,82;UBERON:0002346,1.80e-78,86;UBERON:0002619,2.63e-72,22;UBERON:0000956,1.47e-68,25;UBERON:0000203,1.47e-68,25;UBERON:0003056,3.50e-67,61;UBERON:0001950,3.83e-66,20;UBERON:0010371,5.40e-63,104;UBERON:0007023,1.57e-52,114;UBERON:0010314,1.33e-49,132;UBERON:0004121,2.61e-42,171;UBERON:0000924,2.61e-42,171;UBERON:0006601,2.61e-42,171;UBERON:0011216,6.01e-34,223;UBERON:0000025,1.57e-30,192;UBERON:0004111,1.17e-24,240;UBERON:0003076,1.07e-22,15;UBERON:0003057,1.07e-22,15;UBERON:0001871,2.00e-22,6;UBERON:0002420,4.29e-22,9;UBERON:0007245,4.29e-22,9;UBERON:0010009,4.29e-22,9;UBERON:0010011,4.29e-22,9;UBERON:0000454,4.29e-22,9;UBERON:0000125,2.36e-21,9;UBERON:0002308,2.36e-21,9;UBERON:0000200,1.60e-20,6;UBERON:0004732,8.36e-18,13;UBERON:0001872,2.88e-17,5;UBERON:0000349,3.87e-17,5;UBERON:0002021,6.76e-17,5;UBERON:0009663,4.67e-16,7;UBERON:0000483,1.12e-15,306;UBERON:0004733,1.64e-15,12;UBERON:0002028,1.64e-15,12;UBERON:0007277,1.64e-15,12;UBERON:0000119,2.08e-15,309;UBERON:0000369,8.73e-14,4;UBERON:0002435,8.73e-14,4;UBERON:0000204,8.73e-14,4;UBERON:0010082,8.73e-14,4;UBERON:0002298,7.25e-13,6;UBERON:0002680,3.77e-12,9;UBERON:0001895,3.77e-12,9;UBERON:0010092,3.77e-12,9;UBERON:0001870,4.86e-11,3;UBERON:0001894,6.14e-11,7;UBERON:0006222,6.14e-11,7;UBERON:0005383,1.44e-10,3;UBERON:0005382,1.44e-10,3;UBERON:0000988,4.27e-10,3;UBERON:0002240,1.44e-09,3;UBERON:0005174,1.44e-09,3;UBERON:0001137,1.44e-09,3;UBERON:0001876,6.62e-08,2;UBERON:0002771,7.07e-08,2;UBERON:0002702,8.64e-08,2;UBERON:0001954,1.05e-07,2;UBERON:0003022,1.05e-07,2;UBERON:0002421,1.05e-07,2;UBERON:0002600,1.05e-07,2;UBERON:0001873,1.37e-07,2;UBERON:0010122,1.37e-07,2;UBERON:0000007,2.46e-07,2;UBERON:0000923,3.86e-07,560;UBERON:0010316,3.86e-07,560;UBERON:0005291,3.86e-07,560;UBERON:0006598,3.86e-07,560;UBERON:0010317,3.86e-07,560;UBERON:0002532,3.86e-07,560;UBERON:0002148,4.78e-07,2;UBERON:0006331,4.78e-07,2;UBERON:0009662,4.78e-07,2;UBERON:0002050,5.36e-07,564;UBERON:0001897,5.77e-07,2;UBERON:0010225,5.77e-07,2;UBERON:0005162,7.17e-07,2;UBERON:0000122,7.17e-07,2;UBERON:0001875,8.88e-07,2;UBERON:0006514,8.88e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,1.23186982565596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0.775250277507987,0,0.66944122552934,2.01414658554573,0.760272105718513,5.85748938115607,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46479474626577,0.462985512576611,7.41991193714933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,17.8946576597934,3.65740482667333,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,3.87733098438087,4.08179631912146,1.99613798001194,0,0,0,0,0,0,0,0,0,3.54296554325536,5.18564686089254,3.05163472634166,2.98564001814306,3.25102380848902,4.16832254592548,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,0,0,0,0,1.88723172345896,0.802577647298789,2.81117334870407,0,0,0,0.394584402849391,1.20990716048664,2.14250933141343,0.505492637027904,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0,10.1930381488965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,1.09524303113594,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,8.74752658790234,3.40508515278939,0,0,0,0,0,10.6311724151543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,2.77688463659649,0,0,0,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,7.08854543973589,5.85726071529423,5.00763722825999,0.573409195690071,1.77486482458964,2.73224172942087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22162962682788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,9.95552988995123,5.6678630530234,5.74681892605745,9.02512002659322,2.26864526599546,9.40538633513363,5.16722066021924,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,12.2243028159294,14.8404838736631,7.64741147054381,12.7465778489753,1.64092442705466,0,0,0,0,0,0.336283722218824,4.24875922965642,2.04895972216168,0,0,0,5.30163917219287,12.8914636183184,0,0,0.156986185701028,4.71346769748006,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69783147837478,0,0,0.980593287015622,0,1.37415926980462,2.67341760294377,1.6906229103336,0,0,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0.716697915757256,0,9.92675756787355,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,1.44806194206653,0.213233981900981,0,0.0645889098360061,0.124149428591716,0,0.445530107947154,0.606351566874658,0,0,0.202056159043763,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr10:129797778..129797828,+ | |||
}} |
Revision as of 05:35, 11 January 2014
Short description: | p@chr10:129797778..129797828, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129797778..129797828, + |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data