FFCP PHASE1:Hg19::chr2:77749519..77749541,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80059|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19411|TSSclassifier=S|UniProt=Q6ZT31,Q86VH4,B3KV11,Q9H9T0,Q4KMX1|association_with_transcript=-17bp_to_ENST00000409088,NM_001134745,NM_024993,uc002snq.2,uc002snr.2,uc002sns.2,uc002snt.2_5end|coexpression_cluster_id=C3|description=CAGE_peak_5_at_LRRTM4_5end|id=chr2:77749519..77749541,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;2.59e-17;82!UBERON:0010122;5.81e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.31e-77!57;UBERON:0005068!5.31e-77!57;UBERON:0006241!5.31e-77!57;UBERON:0007135!5.31e-77!57;UBERON:0001017!1.20e-74!82;UBERON:0005743!2.14e-73!86;UBERON:0001893!6.98e-71!34;UBERON:0002020!9.95e-71!34;UBERON:0003528!9.95e-71!34;UBERON:0002780!2.80e-69!41;UBERON:0001890!2.80e-69!41;UBERON:0006240!2.80e-69!41;UBERON:0002791!2.42e-68!33;UBERON:0000073!5.35e-68!94;UBERON:0001016!5.35e-68!94;UBERON:0003080!2.04e-67!42;UBERON:0002616!5.23e-67!59;UBERON:0001869!9.25e-67!32;UBERON:0000955!3.26e-64!69;UBERON:0006238!3.26e-64!69;UBERON:0003075!4.62e-57!86;UBERON:0007284!4.62e-57!86;UBERON:0002346!1.11e-56!90;UBERON:0002619!6.96e-53!22;UBERON:0000956!5.26e-50!25;UBERON:0000203!5.26e-50!25;UBERON:0001950!3.37e-48!20;UBERON:0003056!4.52e-46!61;UBERON:0007023!1.41e-43!115;UBERON:0000924!2.18e-35!173;UBERON:0006601!2.18e-35!173;UBERON:0004121!6.71e-35!169;UBERON:0000033!3.04e-34!123;UBERON:0000153!1.17e-33!129;UBERON:0007811!1.17e-33!129;UBERON:0002420!1.84e-22!9;UBERON:0007245!1.84e-22!9;UBERON:0010009!1.84e-22!9;UBERON:0010011!1.84e-22!9;UBERON:0000454!1.84e-22!9;UBERON:0002308!8.92e-22!9;UBERON:0000125!8.92e-22!9;UBERON:0009663!1.51e-17!7;UBERON:0000200!4.87e-17!6;UBERON:0001871!1.56e-16!7;UBERON:0000025!4.00e-15!194;UBERON:0002298!2.64e-14!8;UBERON:0002021!6.81e-14!5;UBERON:0000349!1.44e-13!5;UBERON:0001872!1.48e-13!5;UBERON:0003076!9.87e-12!15;UBERON:0003057!9.87e-12!15;UBERON:0000369!1.97e-11!4;UBERON:0002435!1.97e-11!4;UBERON:0000204!1.97e-11!4;UBERON:0010082!1.97e-11!4;UBERON:0004732!5.59e-11!13;UBERON:0004111!1.24e-10!241;UBERON:0000064!1.52e-10!219;UBERON:0002771!1.71e-09!3;UBERON:0004733!3.42e-09!12;UBERON:0002028!3.42e-09!12;UBERON:0007277!3.42e-09!12;UBERON:0005383!4.59e-09!3;UBERON:0005382!4.59e-09!3;UBERON:0000483!1.32e-08!309;UBERON:0000119!2.08e-08!312;UBERON:0000988!3.93e-08!3;UBERON:0001896!4.45e-08!3;UBERON:0005290!4.45e-08!3;UBERON:0010096!4.45e-08!3;UBERON:0000475!5.23e-08!365;UBERON:0006331!6.74e-08!3;UBERON:0000477!7.81e-08!286;UBERON:0000062!8.62e-07!511;UBERON:0001873!8.91e-07!2;UBERON:0010122!8.91e-07!2;UBERON:0001870!9.67e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;6.59e-94;22!UBERON:0001869;2.66e-87;32!UBERON:0001950;1.68e-85;20!UBERON:0000956;1.82e-82;25!UBERON:0000203;1.82e-82;25!UBERON:0002791;2.01e-81;32!UBERON:0003528;2.57e-80;34!UBERON:0002020;2.57e-80;34!UBERON:0001893;5.04e-80;34!UBERON:0002780;2.77e-62;41!UBERON:0001890;2.77e-62;41!UBERON:0000073;6.39e-48;53!UBERON:0002616;6.39e-48;53!UBERON:0000955;1.33e-36;68!UBERON:0001017;6.27e-35;75!UBERON:0000200;3.54e-29;6!UBERON:0001016;2.90e-25;83!UBERON:0001871;5.25e-24;6!UBERON:0002021;1.67e-23;5!UBERON:0001872;5.19e-23;5!UBERON:0000349;7.68e-23;5!UBERON:0000369;2.05e-19;4!UBERON:0002435;2.05e-19;4!UBERON:0000204;2.05e-19;4!UBERON:0002420;1.53e-18;9!UBERON:0007245;1.53e-18;9!UBERON:0010009;1.53e-18;9!UBERON:0010011;1.53e-18;9!UBERON:0000454;1.53e-18;9!UBERON:0001870;1.63e-15;3!UBERON:0005383;3.41e-15;3!UBERON:0005382;3.41e-15;3!UBERON:0000125;7.27e-13;9!UBERON:0002308;7.27e-13;9!UBERON:0007023;2.03e-12;114!UBERON:0002298;9.53e-12;6!UBERON:0009663;3.87e-11;7!UBERON:0002702;4.90e-11;2!UBERON:0002771;5.81e-11;2!UBERON:0001873;5.81e-11;2!UBERON:0001876;1.91e-10;2!UBERON:0001954;6.54e-10;2!UBERON:0003022;6.54e-10;2!UBERON:0002421;6.54e-10;2!UBERON:0002600;6.54e-10;2!UBERON:0011216;1.14e-09;132!UBERON:0010314;1.72e-08;132!UBERON:0004732;3.86e-08;13|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.52e-98,32;UBERON:0002619,4.99e-94,22;UBERON:0001893,5.00e-92,34;UBERON:0003528,1.07e-91,34;UBERON:0002020,1.07e-91,34;UBERON:0002791,1.51e-90,32;UBERON:0002780,2.50e-87,41;UBERON:0001890,2.50e-87,41;UBERON:0003080,2.50e-87,41;UBERON:0006240,2.50e-87,41;UBERON:0001049,1.29e-86,56;UBERON:0005068,1.29e-86,56;UBERON:0006241,1.29e-86,56;UBERON:0007135,1.29e-86,56;UBERON:0000073,2.04e-86,53;UBERON:0002616,2.04e-86,53;UBERON:0001950,1.36e-85,20;UBERON:0000956,1.42e-82,25;UBERON:0000203,1.42e-82,25;UBERON:0000955,1.34e-78,68;UBERON:0006238,1.34e-78,68;UBERON:0001017,4.24e-73,81;UBERON:0001016,6.94e-69,89;UBERON:0002346,2.12e-61,86;UBERON:0003056,3.74e-61,61;UBERON:0003075,8.17e-61,82;UBERON:0007284,8.17e-61,82;UBERON:0010371,1.64e-46,104;UBERON:0010314,6.91e-40,132;UBERON:0007023,1.00e-39,114;UBERON:0004121,8.37e-35,171;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80059 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19411 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZT31,Q86VH4,B3KV11,Q9H9T0,Q4KMX1 | |||
|association_with_transcript=-17bp_to_ENST00000409088,NM_001134745,NM_024993,uc002snq.2,uc002snr.2,uc002sns.2,uc002snt.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_LRRTM4_5end | |||
|id=chr2:77749519..77749541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.59e-17;82!UBERON:0010122;5.81e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@LRRTM4 | |||
}} |
Revision as of 19:53, 12 September 2013
Short description: | p5@LRRTM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_LRRTM4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -17bp_to_ENST00000409088, NM_001134745, NM_024993, uc002snq.2, uc002snr.2, uc002sns.2, uc002snt.2_5end |
EntrezGene: | LRRTM4 |
HGNC: | 19411 |
UniProt: | Q6ZT31Q86VH4B3KV11Q9H9T0Q4KMX1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.