FFCP PHASE1:Hg19::chrX:138724821..138724841,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4168|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6940|TSSclassifier=W|UniProt=P10911|association_with_transcript=45bp_to_ENST00000370576_5end|coexpression_cluster_id=C24|description=CAGE_peak_1_at_MCF2_5end|id=chrX:138724821..138724841,-|ontology_enrichment_celltype=CL:0000147!8.60e-07!14|ontology_enrichment_celltype_v019=CL:0000148;1.03e-07;10|ontology_enrichment_celltype_v019_2=CL:0000148,1.03e-07,10;CL:0000541,1.03e-07,10|ontology_enrichment_development_v019=UBERON:0006601;1.28e-21;82!UBERON:0006241;3.36e-10;3!UBERON:0003057;3.36e-10;3!UBERON:0010122;1.30e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.45e-70!57;UBERON:0005068!6.45e-70!57;UBERON:0006241!6.45e-70!57;UBERON:0007135!6.45e-70!57;UBERON:0002346!2.99e-65!90;UBERON:0003075!1.04e-61!86;UBERON:0007284!1.04e-61!86;UBERON:0002616!4.04e-58!59;UBERON:0002780!3.79e-56!41;UBERON:0001890!3.79e-56!41;UBERON:0006240!3.79e-56!41;UBERON:0005743!1.18e-54!86;UBERON:0003080!1.56e-54!42;UBERON:0001017!1.38e-53!82;UBERON:0000955!1.61e-53!69;UBERON:0006238!1.61e-53!69;UBERON:0000073!7.46e-50!94;UBERON:0001016!7.46e-50!94;UBERON:0003056!1.23e-48!61;UBERON:0007023!2.75e-47!115;UBERON:0002020!3.41e-45!34;UBERON:0003528!3.41e-45!34;UBERON:0001893!1.44e-44!34;UBERON:0002791!7.06e-43!33;UBERON:0001869!7.29e-42!32;UBERON:0000033!2.23e-41!123;UBERON:0000153!4.94e-40!129;UBERON:0007811!4.94e-40!129;UBERON:0002619!2.94e-35!22;UBERON:0000924!1.37e-34!173;UBERON:0006601!1.37e-34!173;UBERON:0004121!6.79e-32!169;UBERON:0001950!7.76e-32!20;UBERON:0000956!2.50e-30!25;UBERON:0000203!2.50e-30!25;UBERON:0002308!1.84e-16!9;UBERON:0000125!1.84e-16!9;UBERON:0003076!7.04e-16!15;UBERON:0003057!7.04e-16!15;UBERON:0002420!7.29e-16!9;UBERON:0007245!7.29e-16!9;UBERON:0010009!7.29e-16!9;UBERON:0010011!7.29e-16!9;UBERON:0000454!7.29e-16!9;UBERON:0000025!2.46e-13!194;UBERON:0009663!6.62e-13!7;UBERON:0001894!7.11e-13!7;UBERON:0006222!7.11e-13!7;UBERON:0000200!5.75e-12!6;UBERON:0004111!2.14e-11!241;UBERON:0004733!2.17e-11!12;UBERON:0002028!2.17e-11!12;UBERON:0007277!2.17e-11!12;UBERON:0002298!2.39e-11!8;UBERON:0001871!6.02e-11!7;UBERON:0000477!9.48e-11!286;UBERON:0004732!2.39e-10!13;UBERON:0000483!4.38e-10!309;UBERON:0000475!4.81e-10!365;UBERON:0000119!8.03e-10!312;UBERON:0001872!1.17e-09!5;UBERON:0000349!1.37e-09!5;UBERON:0002021!1.73e-09!5;UBERON:0000369!2.56e-08!4;UBERON:0002435!2.56e-08!4;UBERON:0000204!2.56e-08!4;UBERON:0010082!2.56e-08!4;UBERON:0000064!7.11e-08!219;UBERON:0003296!8.54e-08!4;UBERON:0010133!8.54e-08!4;UBERON:0002680!3.87e-07!9;UBERON:0001895!3.87e-07!9;UBERON:0010092!3.87e-07!9;UBERON:0003135!4.16e-07!11;UBERON:0000988!4.34e-07!3;UBERON:0002771!6.48e-07!3;UBERON:0000062!6.65e-07!511;UBERON:0005383!9.98e-07!3;UBERON:0005382!9.98e-07!3|ontology_enrichment_uberon_v019=UBERON:0003528;2.66e-63;34!UBERON:0002020;2.66e-63;34!UBERON:0001869;5.05e-61;32!UBERON:0002791;7.01e-61;32!UBERON:0001893;8.22e-58;34!UBERON:0002619;3.86e-56;22!UBERON:0002780;1.78e-55;41!UBERON:0001890;1.78e-55;41!UBERON:0000073;5.51e-52;53!UBERON:0002616;5.51e-52;53!UBERON:0001950;5.14e-50;20!UBERON:0000956;5.30e-49;25!UBERON:0000203;5.30e-49;25!UBERON:0000955;1.59e-32;68!UBERON:0001017;8.09e-31;75!UBERON:0000125;8.65e-28;9!UBERON:0002308;8.65e-28;9!UBERON:0001016;2.92e-27;83!UBERON:0002420;1.10e-26;9!UBERON:0007245;1.10e-26;9!UBERON:0010009;1.10e-26;9!UBERON:0010011;1.10e-26;9!UBERON:0000454;1.10e-26;9!UBERON:0009663;1.56e-21;7!UBERON:0002298;9.71e-20;6!UBERON:0000200;1.22e-19;6!UBERON:0007023;2.38e-17;114!UBERON:0004733;2.72e-16;12!UBERON:0002028;2.72e-16;12!UBERON:0000349;8.24e-16;5!UBERON:0001872;1.03e-15;5!UBERON:0002021;1.95e-15;5!UBERON:0004732;6.28e-15;13!UBERON:0002784;3.82e-14;4!UBERON:0000369;2.41e-13;4!UBERON:0002435;2.41e-13;4!UBERON:0000204;2.41e-13;4!UBERON:0001894;3.56e-12;7!UBERON:0000988;2.79e-11;3!UBERON:0001870;3.36e-11;3!UBERON:0001871;5.20e-11;6!UBERON:0005383;1.74e-10;3!UBERON:0005382;1.74e-10;3!UBERON:0011216;1.74e-10;132!UBERON:0001896;3.36e-10;3!UBERON:0002240;3.36e-10;3!UBERON:0005174;3.36e-10;3!UBERON:0005290;3.36e-10;3!UBERON:0001137;3.36e-10;3!UBERON:0002680;4.17e-09;9!UBERON:0001895;4.17e-09;9!UBERON:0010314;7.29e-09;132!UBERON:0001905;2.46e-08;2!UBERON:0002757;2.46e-08;2!UBERON:0010134;2.46e-08;2!UBERON:0005408;2.46e-08;2!UBERON:0001899;2.46e-08;2!UBERON:0002702;3.98e-08;2!UBERON:0002148;5.68e-08;2!UBERON:0006331;5.68e-08;2!UBERON:0009662;5.68e-08;2!UBERON:0002771;8.48e-08;2!UBERON:0001954;8.48e-08;2!UBERON:0003022;8.48e-08;2!UBERON:0002421;8.48e-08;2!UBERON:0002600;8.48e-08;2!UBERON:0001873;1.30e-07;2!UBERON:0001897;1.67e-07;2!UBERON:0010225;1.67e-07;2!UBERON:0002346;2.13e-07;4!UBERON:0000923;2.13e-07;4!UBERON:0010316;2.13e-07;4!UBERON:0005291;2.13e-07;4!UBERON:0001875;2.53e-07;2!UBERON:0006514;2.53e-07;2!UBERON:0001876;7.61e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.24e-105,56;UBERON:0005068,5.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4168 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6940 | |||
|TSSclassifier=W | |||
|UniProt=P10911 | |||
|association_with_transcript=45bp_to_ENST00000370576_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_1_at_MCF2_5end | |||
|id=chrX:138724821..138724841,- | |||
|ontology_enrichment_celltype=CL:0000147!8.60e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.03e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.03e-07,10;CL:0000541,1.03e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.28e-21;82!UBERON:0006241;3.36e-10;3!UBERON:0003057;3.36e-10;3!UBERON:0010122;1.30e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@MCF2 | |||
}} |
Revision as of 10:57, 14 September 2013
Short description: | p1@MCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MCF2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 45bp_to_ENST00000370576_5end |
EntrezGene: | MCF2 |
HGNC: | 6940 |
UniProt: | P10911 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.03e-07 | 10 |
melanoblast | 1.03e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.