FFCP PHASE1:Hg19::chr11:67182815..67182840,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29268 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000529925_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_CARNS1_5end | |||
|id=chr11:67182815..67182840,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.02e-10;3!CL:0000149;1.24e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,5.19e-10,3;CL:0000149,1.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.91e-20;82!UBERON:0006241;1.52e-11;3!UBERON:0003057;1.52e-11;3!UBERON:0010122;6.43e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;9.99e-61;34!UBERON:0003528;7.51e-59;34!UBERON:0002020;7.51e-59;34!UBERON:0002791;3.04e-57;32!UBERON:0001869;3.41e-57;32!UBERON:0002780;4.78e-51;41!UBERON:0001890;4.78e-51;41!UBERON:0000073;2.10e-49;53!UBERON:0002616;2.10e-49;53!UBERON:0002619;3.63e-49;22!UBERON:0001950;2.92e-43;20!UBERON:0000956;6.51e-43;25!UBERON:0000203;6.51e-43;25!UBERON:0001017;3.53e-33;75!UBERON:0000955;9.30e-33;68!UBERON:0000125;2.17e-30;9!UBERON:0002308;2.17e-30;9!UBERON:0002420;5.87e-30;9!UBERON:0007245;5.87e-30;9!UBERON:0010009;5.87e-30;9!UBERON:0010011;5.87e-30;9!UBERON:0000454;5.87e-30;9!UBERON:0001016;2.33e-26;83!UBERON:0009663;5.64e-24;7!UBERON:0002298;3.72e-21;6!UBERON:0004732;1.89e-20;13!UBERON:0000200;6.92e-20;6!UBERON:0004733;2.08e-17;12!UBERON:0002028;2.08e-17;12!UBERON:0000349;7.44e-17;5!UBERON:0007023;4.78e-16;114!UBERON:0000369;4.68e-14;4!UBERON:0002435;4.68e-14;4!UBERON:0000204;4.68e-14;4!UBERON:0001871;3.76e-12;6!UBERON:0002021;1.20e-11;5!UBERON:0002240;1.52e-11;3!UBERON:0005174;1.52e-11;3!UBERON:0001137;1.52e-11;3!UBERON:0001896;1.75e-11;3!UBERON:0005290;1.75e-11;3!UBERON:0000988;2.08e-11;3!UBERON:0001872;2.64e-11;5!UBERON:0005383;6.84e-11;3!UBERON:0005382;6.84e-11;3!UBERON:0011216;8.04e-11;132!UBERON:0001870;1.32e-10;3!UBERON:0001781;5.02e-10;3!UBERON:0001782;5.02e-10;3!UBERON:0010314;2.10e-09;132!UBERON:0002680;2.40e-09;9!UBERON:0001895;2.40e-09;9!UBERON:0005162;9.55e-09;2!UBERON:0000122;9.55e-09;2!UBERON:0001897;1.71e-08;2!UBERON:0010225;1.71e-08;2!UBERON:0001875;1.94e-08;2!UBERON:0006514;1.94e-08;2!UBERON:0002148;4.02e-08;2!UBERON:0006331;4.02e-08;2!UBERON:0009662;4.02e-08;2!UBERON:0001873;6.43e-08;2!UBERON:0002771;7.91e-08;2!UBERON:0001876;1.09e-07;2!UBERON:0001954;1.09e-07;2!UBERON:0003022;1.09e-07;2!UBERON:0002421;1.09e-07;2!UBERON:0002600;1.09e-07;2!UBERON:0002702;1.81e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0,0,0,0,0,0,0,0.451725357233318,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0.144846518960824,0,0,0,0,0,3.66741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,0,2.1100756394171,1.74306691720059,4.29883862082845,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28225062558195,5.24823433119529,1.62689197332152,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,9.94147647766298,5.76744607283102,0,0,0.63337622438398,0.597743964753209,0.828851746593443,0,0.102268682502155,0,0,0,0,0,0,0,0,21.3253204140948,15.3067361967055,0,0,0,0,0,0,0,0,0,0,25.6865001886013,3.0149109656352,4.5774520895125,0.331737779793674,3.84211904639612,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,62.1438446081842,0.802577647298789,27.4089401498647,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0.0882561266915003,0,0,0,11.6491864558817,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,32.4226955903286,16.2917400881472,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,9.54275627771164,5.5843396505746,0.160753148465019,0.275078873194468,0,0,0,9.5984299519679,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,21.0731218869327,8.85958431676023,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,3.54427271986794,10.8603375762747,6.63511932744449,18.3490942620823,7.76503360757966,26.3288748471466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0.322231671127465,0,0,0,0,0,0,0,2.14441591374926,0,0,0,0,0,1.54400723580486,0.219284049578707,0,0.578742114812744,0,0,0,0,8.29550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,12.7816157941954,17.0035891590702,7.34315751662896,20.921869152557,0,12.2408336861666,15.8246132719214,71.3847101295772,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,11.3463142158903,13.2783276764354,4.96048311602842,12.936825279557,0,0,0,0,0,0,0,0,0,0,0,0,16.5846148463469,12.1679631091271,0,0,0,6.44173918655608,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0,37.6912256860695,7.12911360785006,18.1741962860862,0,0,0,0,0,0,0,4.3820183294791,0,14.0472791488422,0.157771562193185,17.0658640379196,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,34.8251164572687,17.3767433047984,0,0.23806443146374,0,0.0620747142958579,0,0,0.606351566874658,0,0,0.134704106029175,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p3@CARNS1 | |||
}} |
Revision as of 08:58, 11 January 2014
Short description: | p3@CARNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CARNS1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000529925_5end |
EntrezGene: | CARNS1 |
HGNC: | 29268 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 5.19e-10 | 3 |
visual pigment cell | 1.27e-07 | 4 |