FFCP PHASE1:Hg19::chr17:4890919..4890985,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18807 | |||
|TSSclassifier=strong | |||
|UniProt=O94983 | |||
|association_with_transcript=0bp_to_ENST00000348066,ENST00000358183,ENST00000381311,NM_001171166,NM_015099,uc002gah.1,uc002gai.1,uc010vsu.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_CAMTA2_5end | |||
|id=chr17:4890919..4890985,- | |||
|ontology_enrichment_celltype=CL:0002057!2.56e-07!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.56e-07,42;CL:0002057,2.56e-07,42;CL:0000473,3.43e-07,48;CL:0000234,3.43e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-39!115;UBERON:0001049!1.45e-26!57;UBERON:0005068!1.45e-26!57;UBERON:0006241!1.45e-26!57;UBERON:0007135!1.45e-26!57;UBERON:0002616!2.52e-22!59;UBERON:0003080!1.12e-20!42;UBERON:0002780!3.26e-20!41;UBERON:0001890!3.26e-20!41;UBERON:0006240!3.26e-20!41;UBERON:0003075!3.51e-19!86;UBERON:0007284!3.51e-19!86;UBERON:0000955!1.02e-17!69;UBERON:0006238!1.02e-17!69;UBERON:0002346!4.29e-17!90;UBERON:0000025!7.13e-17!194;UBERON:0001893!2.51e-16!34;UBERON:0002020!2.55e-16!34;UBERON:0003528!2.55e-16!34;UBERON:0002791!1.12e-15!33;UBERON:0001017!1.38e-15!82;UBERON:0001869!2.84e-15!32;UBERON:0002619!4.63e-15!22;UBERON:0000467!5.16e-14!625;UBERON:0005743!5.34e-14!86;UBERON:0000480!5.77e-14!626;UBERON:0004111!8.58e-14!241;UBERON:0001950!9.56e-14!20;UBERON:0003056!2.96e-13!61;UBERON:0000073!8.81e-12!94;UBERON:0001016!8.81e-12!94;UBERON:0000956!4.13e-11!25;UBERON:0000203!4.13e-11!25;UBERON:0000468!5.49e-11!659;UBERON:0003081!9.02e-11!216;UBERON:0000923!1.39e-10!604;UBERON:0005291!1.39e-10!604;UBERON:0006598!1.39e-10!604;UBERON:0002532!1.39e-10!604;UBERON:0000477!1.56e-10!286;UBERON:0002050!1.84e-10!605;UBERON:0005423!1.84e-10!605;UBERON:0000033!3.77e-10!123;UBERON:0000153!6.52e-10!129;UBERON:0007811!6.52e-10!129;UBERON:0000483!1.32e-09!309;UBERON:0000119!1.58e-09!312;UBERON:0004121!2.70e-09!169;UBERON:0000922!2.97e-09!612;UBERON:0000924!1.93e-08!173;UBERON:0006601!1.93e-08!173;UBERON:0000062!7.25e-08!511;UBERON:0003076!4.33e-07!15;UBERON:0003057!4.33e-07!15;UBERON:0002420!5.22e-07!9;UBERON:0007245!5.22e-07!9;UBERON:0010009!5.22e-07!9;UBERON:0010011!5.22e-07!9;UBERON:0000454!5.22e-07!9;UBERON:0001009!7.10e-07!113;UBERON:0002308!7.21e-07!9;UBERON:0000125!7.21e-07!9;UBERON:0000475!7.63e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;4.22e-15;22!UBERON:0002780;5.96e-15;41!UBERON:0001890;5.96e-15;41!UBERON:0001893;5.87e-14;34!UBERON:0003528;6.13e-14;34!UBERON:0002020;6.13e-14;34!UBERON:0000073;6.19e-14;53!UBERON:0002616;6.19e-14;53!UBERON:0001869;7.31e-14;32!UBERON:0001950;8.80e-14;20!UBERON:0002791;9.12e-14;32!UBERON:0000956;2.97e-11;25!UBERON:0000203;2.97e-11;25!UBERON:0007023;2.22e-10;114!UBERON:0001017;1.50e-08;75!UBERON:0000955;2.69e-08;68!UBERON:0002420;4.92e-07;9!UBERON:0007245;4.92e-07;9!UBERON:0010009;4.92e-07;9!UBERON:0010011;4.92e-07;9!UBERON:0000454;4.92e-07;9!UBERON:0000125;6.85e-07;9!UBERON:0002308;6.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.74e-39,114;UBERON:0001049,4.36e-26,56;UBERON:0005068,4.36e-26,56;UBERON:0006241,4.36e-26,56;UBERON:0007135,4.36e-26,56;UBERON:0000073,2.07e-24,53;UBERON:0002616,2.07e-24,53;UBERON:0002780,3.26e-20,41;UBERON:0001890,3.26e-20,41;UBERON:0003080,3.26e-20,41;UBERON:0006240,3.26e-20,41;UBERON:0003075,8.38e-19,82;UBERON:0007284,8.38e-19,82;UBERON:0010371,1.33e-17,104;UBERON:0000955,2.77e-17,68;UBERON:0006238,2.77e-17,68;UBERON:0002346,1.10e-16,86;UBERON:0000025,1.39e-16,192;UBERON:0001893,2.51e-16,34;UBERON:0003528,2.55e-16,34;UBERON:0002020,2.55e-16,34;UBERON:0001869,2.84e-15,32;UBERON:0001017,3.49e-15,81;UBERON:0002791,3.70e-15,32;UBERON:0002619,4.63e-15,22;UBERON:0010314,7.73e-15,132;UBERON:0001950,9.56e-14,20;UBERON:0004111,3.33e-13,240;UBERON:0003056,4.93e-13,61;UBERON:0001016,1.02e-12,89;UBERON:0000923,1.13e-12,560;UBERON:0010316,1.13e-12,560;UBERON:0005291,1.13e-12,560;UBERON:0006598,1.13e-12,560;UBERON:0010317,1.13e-12,560;UBERON:0002532,1.13e-12,560;UBERON:0002050,3.65e-12,564;UBERON:0005423,5.23e-12,581;UBERON:0003081,3.12e-11,203;UBERON:0000956,4.13e-11,25;UBERON:0000203,4.13e-11,25;UBERON:0000922,8.77e-11,592;UBERON:0000483,4.34e-09,306;UBERON:0000119,5.19e-09,309;UBERON:0004121,2.95e-08,171;UBERON:0000924,2.95e-08,171;UBERON:0006601,2.95e-08,171;UBERON:0000479,3.08e-07,773;UBERON:0003076,4.33e-07,15;UBERON:0003057,4.33e-07,15;UBERON:0002420,5.22e-07,9;UBERON:0007245,5.22e-07,9;UBERON:0010009,5.22e-07,9;UBERON:0010011,5.22e-07,9;UBERON:0000454,5.22e-07,9;UBERON:0002390,5.35e-07,98;UBERON:0003061,5.35e-07,98;UBERON:0002193,5.80e-07,108;UBERON:0000125,7.21e-07,9;UBERON:0002308,7.21e-07,9 | |||
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| |||
|short_description=p1@CAMTA2 | |||
}} |
Revision as of 13:18, 20 January 2014
Short description: | p1@CAMTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAMTA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000348066, ENST00000358183, ENST00000381311, NM_001171166, NM_015099, uc002gah.1, uc002gai.1, uc010vsu.1_5end |
EntrezGene: | CAMTA2 |
HGNC: | 18807 |
UniProt: | O94983 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.56e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.56e-07 | 42 |
defensive cell | 3.43e-07 | 48 |
phagocyte | 3.43e-07 | 48 |