FFCP PHASE1:Hg19::chr5:132149017..132149073,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=134548 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27033 | |||
|TSSclassifier=strong | |||
|UniProt=Q2M3V2 | |||
|association_with_transcript=0bp_to_ENST00000378693,NM_175873,uc003kxw.2_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_SOWAHA_5end | |||
|id=chr5:132149017..132149073,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.80e-07;2!CL:0000242;1.80e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.74e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.60e-16;82!UBERON:0006215;3.65e-10;3!UBERON:0010122;7.96e-09;2!UBERON:0007297;1.44e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.93e-58!57;UBERON:0005068!5.93e-58!57;UBERON:0006241!5.93e-58!57;UBERON:0007135!5.93e-58!57;UBERON:0007023!2.24e-57!115;UBERON:0002616!2.21e-50!59;UBERON:0002780!8.68e-50!41;UBERON:0001890!8.68e-50!41;UBERON:0006240!8.68e-50!41;UBERON:0003080!2.60e-48!42;UBERON:0000955!2.00e-46!69;UBERON:0006238!2.00e-46!69;UBERON:0001017!2.74e-44!82;UBERON:0005743!2.72e-43!86;UBERON:0003075!3.15e-43!86;UBERON:0007284!3.15e-43!86;UBERON:0001893!8.50e-43!34;UBERON:0002020!2.24e-42!34;UBERON:0003528!2.24e-42!34;UBERON:0002791!2.99e-41!33;UBERON:0002346!1.61e-40!90;UBERON:0001869!7.25e-40!32;UBERON:0000073!5.21e-39!94;UBERON:0001016!5.21e-39!94;UBERON:0002619!2.30e-33!22;UBERON:0003056!6.45e-33!61;UBERON:0001950!4.64e-30!20;UBERON:0000956!1.34e-28!25;UBERON:0000203!1.34e-28!25;UBERON:0000153!4.10e-24!129;UBERON:0007811!4.10e-24!129;UBERON:0000033!8.41e-24!123;UBERON:0004121!4.37e-22!169;UBERON:0000924!3.81e-21!173;UBERON:0006601!3.81e-21!173;UBERON:0002420!2.88e-16!9;UBERON:0007245!2.88e-16!9;UBERON:0010009!2.88e-16!9;UBERON:0010011!2.88e-16!9;UBERON:0000454!2.88e-16!9;UBERON:0002308!2.35e-15!9;UBERON:0000125!2.35e-15!9;UBERON:0000025!5.07e-15!194;UBERON:0001871!1.06e-13!7;UBERON:0004111!1.65e-13!241;UBERON:0009663!6.46e-13!7;UBERON:0000062!4.27e-12!511;UBERON:0000064!2.91e-11!219;UBERON:0000477!3.49e-11!286;UBERON:0000481!4.57e-11!347;UBERON:0000483!5.00e-11!309;UBERON:0000200!5.76e-11!6;UBERON:0003076!6.12e-11!15;UBERON:0003057!6.12e-11!15;UBERON:0000119!9.89e-11!312;UBERON:0000349!5.87e-10!5;UBERON:0004733!1.82e-09!12;UBERON:0002028!1.82e-09!12;UBERON:0007277!1.82e-09!12;UBERON:0002298!3.57e-09!8;UBERON:0001872!6.93e-09!5;UBERON:0004732!1.40e-08!13;UBERON:0000369!2.04e-08!4;UBERON:0002435!2.04e-08!4;UBERON:0000204!2.04e-08!4;UBERON:0010082!2.04e-08!4;UBERON:0001894!2.73e-08!7;UBERON:0006222!2.73e-08!7;UBERON:0000475!3.43e-08!365;UBERON:0000922!7.48e-08!612;UBERON:0000923!4.89e-07!604;UBERON:0005291!4.89e-07!604;UBERON:0006598!4.89e-07!604;UBERON:0002532!4.89e-07!604;UBERON:0002050!5.57e-07!605;UBERON:0005423!5.57e-07!605;UBERON:0005383!9.56e-07!3;UBERON:0005382!9.56e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.88e-68;34!UBERON:0001869;1.73e-66;32!UBERON:0002791;1.87e-66;32!UBERON:0003528;1.90e-63;34!UBERON:0002020;1.90e-63;34!UBERON:0002780;7.76e-61;41!UBERON:0001890;7.76e-61;41!UBERON:0002619;3.34e-58;22!UBERON:0001950;2.19e-51;20!UBERON:0000956;7.36e-51;25!UBERON:0000203;7.36e-51;25!UBERON:0000073;9.79e-50;53!UBERON:0002616;9.79e-50;53!UBERON:0000955;5.37e-34;68!UBERON:0002420;2.35e-32;9!UBERON:0007245;2.35e-32;9!UBERON:0010009;2.35e-32;9!UBERON:0010011;2.35e-32;9!UBERON:0000454;2.35e-32;9!UBERON:0001017;1.73e-30;75!UBERON:0009663;2.59e-25;7!UBERON:0000125;7.99e-25;9!UBERON:0002308;7.99e-25;9!UBERON:0001016;2.26e-23;83!UBERON:0000200;3.08e-21;6!UBERON:0007023;1.22e-20;114!UBERON:0000349;4.12e-19;5!UBERON:0001871;2.09e-18;6!UBERON:0000369;6.74e-16;4!UBERON:0002435;6.74e-16;4!UBERON:0000204;6.74e-16;4!UBERON:0005383;2.04e-12;3!UBERON:0005382;2.04e-12;3!UBERON:0002021;1.19e-11;5!UBERON:0001872;1.25e-11;5!UBERON:0001870;1.49e-11;3!UBERON:0011216;2.64e-11;132!UBERON:0006947;1.34e-10;3!UBERON:0004054;1.34e-10;3!UBERON:0004733;5.08e-09;12!UBERON:0002028;5.08e-09;12!UBERON:0001873;7.96e-09;2!UBERON:0001876;9.23e-09;2!UBERON:0001954;1.41e-08;2!UBERON:0003022;1.41e-08;2!UBERON:0002421;1.41e-08;2!UBERON:0002600;1.41e-08;2!UBERON:0002771;2.56e-08;2!UBERON:0004732;2.79e-08;13!UBERON:0002784;3.04e-08;4!UBERON:0001875;3.73e-08;2!UBERON:0006514;3.73e-08;2!UBERON:0001894;3.89e-08;7!UBERON:0002702;4.07e-08;2!UBERON:0005904;4.66e-08;4!UBERON:0001897;5.03e-08;2!UBERON:0010225;5.03e-08;2!UBERON:0010314;9.58e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.49e-91,53;UBERON:0002616,6.49e-91,53;UBERON:0001049,3.13e-90,56;UBERON:0005068,3.13e-90,56;UBERON:0006241,3.13e-90,56;UBERON:0007135,3.13e-90,56;UBERON:0002780,1.21e-85,41;UBERON:0001890,1.21e-85,41;UBERON:0003080,1.21e-85,41;UBERON:0006240,1.21e-85,41;UBERON:0001893,3.41e-80,34;UBERON:0000955,7.46e-76,68;UBERON:0006238,7.46e-76,68;UBERON:0003528,1.75e-74,34;UBERON:0002020,1.75e-74,34;UBERON:0001869,4.39e-74,32;UBERON:0002791,6.05e-74,32;UBERON:0001017,2.26e-69,81;UBERON:0007023,8.58e-64,114;UBERON:0001016,1.45e-61,89;UBERON:0003075,7.57e-59,82;UBERON:0007284,7.57e-59,82;UBERON:0002619,3.68e-58,22;UBERON:0002346,1.10e-55,86;UBERON:0003056,3.34e-55,61;UBERON:0001950,2.44e-51,20;UBERON:0000956,8.01e-51,25;UBERON:0000203,8.01e-51,25;UBERON:0010371,1.84e-49,104;UBERON:0010314,4.65e-35,132;UBERON:0002420,2.31e-32,9;UBERON:0007245,2.31e-32,9;UBERON:0010009,2.31e-32,9;UBERON:0010011,2.31e-32,9;UBERON:0000454,2.31e-32,9;UBERON:0004121,7.72e-31,171;UBERON:0000924,7.72e-31,171;UBERON:0006601,7.72e-31,171;UBERON:0009663,2.55e-25,7;UBERON:0011216,4.19e-25,223;UBERON:0000125,6.85e-25,9;UBERON:0002308,6.85e-25,9;UBERON:0000200,3.13e-21,6;UBERON:0000025,5.53e-21,192;UBERON:0000349,4.05e-19,5;UBERON:0001871,2.33e-18,6;UBERON:0004111,5.99e-18,240;UBERON:0000369,6.75e-16,4;UBERON:0002435,6.75e-16,4;UBERON:0000204,6.75e-16,4;UBERON:0010082,6.75e-16,4;UBERON:0000483,9.67e-13,306;UBERON:0000119,1.62e-12,309;UBERON:0005383,2.04e-12,3;UBERON:0005382,2.04e-12,3;UBERON:0002021,1.24e-11,5;UBERON:0001872,1.27e-11,5;UBERON:0001870,1.39e-11,3;UBERON:0006947,1.41e-10,3;UBERON:0004054,1.41e-10,3;UBERON:0003076,1.02e-09,15;UBERON:0003057,1.02e-09,15;UBERON:0004733,3.56e-09,12;UBERON:0002028,3.56e-09,12;UBERON:0007277,3.56e-09,12;UBERON:0001873,7.96e-09,2;UBERON:0010122,7.96e-09,2;UBERON:0001876,9.23e-09,2;UBERON:0001954,1.38e-08,2;UBERON:0003022,1.38e-08,2;UBERON:0002421,1.38e-08,2;UBERON:0002600,1.38e-08,2;UBERON:0004732,2.01e-08,13;UBERON:0000923,2.27e-08,560;UBERON:0010316,2.27e-08,560;UBERON:0005291,2.27e-08,560;UBERON:0006598,2.27e-08,560;UBERON:0010317,2.27e-08,560;UBERON:0002532,2.27e-08,560;UBERON:0002771,2.56e-08,2;UBERON:0005423,2.85e-08,581;UBERON:0002050,3.17e-08,564;UBERON:0001875,3.66e-08,2;UBERON:0006514,3.66e-08,2;UBERON:0002784,3.68e-08,4;UBERON:0002702,3.80e-08,2;UBERON:0001894,4.49e-08,7;UBERON:0006222,4.49e-08,7;UBERON:0005904,4.84e-08,4;UBERON:0001897,5.03e-08,2;UBERON:0010225,5.03e-08,2;UBERON:0000922,6.85e-08,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12584087817795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,1.15295962733569,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0.121360521749513,0,0,0.23874448473769,0.890894042497916,0,56.666415922679,65.4112786308884,0.111308705022906,0,0,0.19924798825107,0.276283915531148,9.06957892275394,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,25.2026513984757,17.8114748470754,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.347249989866585,70.8593108651071,101.542201322593,1.52581736317083,1.3269511191747,1.77328571372128,49.1423289624898,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,2.0345239835768,0,0,0,0,2.22423738836234,0,25.534824584062,0,0,0,3.15667522279512,1.20990716048664,0.30607276163049,0.758238955541855,0.751617097072463,0.103688191397247,0,0,0,0,0,0,0,0,0,4.89234671077684,0,0,0,0,0,0,0.677942222341597,0,0,28.4898581801454,0.195551382734803,0,0.213452994739353,0,0.288180834308212,0,0.171594997861965,0,0,0,0,0,0,0,23.4163912596818,13.8274432680913,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.202210631562555,0.0984274815147488,0,26.242579763707,38.5455639295759,0,0,0,0.2249738915515,0,37.6647251279753,0,1.41850273138557,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,1.58679122091228,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,17.7213635993397,24.0391741856867,17.9023030910295,0.573409195690071,1.77486482458964,1.4903136705932,0,0,0,0,0,2.81000943484129,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,22.6743835288838,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,45.7954374937756,8.5017945795351,17.7193583553438,10.2558182120378,0,26.2105986839386,25.997578946728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,17.0870089084538,7.81078098613847,16.7416305165959,19.722316970305,0.546974809018219,0,0.496211178389294,0,0.255524855279191,1.07140367175657,0,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0.679697329768317,23.2835618412486,0.118193840883968,0,0.078493092850514,117.365345667253,0,0.913158720509496,0,0,0.78624198594322,0.158013611732727,0,0,0,0,0,0,0.860454717640555,0,0,1.27016115057279,0.4582137370881,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0,0,3.6271854310734,0.218559560503957,0.940634592723046,0,0,0.785233868459781,2.0793248022896,0,0,0,0,0,0,0,0,0.730336388246517,0,3.58348957878628,0,35.899506820803,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,4.1458471972939,21.6174961351361,0,0,0.581300188524055,0.372448285775147,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p1@SOWAHA | |||
}} |
Revision as of 07:22, 22 January 2014
Short description: | p1@SOWAHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SOWAHA_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000378693, NM_175873, uc003kxw.2_5end |
EntrezGene: | SOWAHA |
HGNC: | 27033 |
UniProt: | Q2M3V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.74e-07 | 2 |