FFCP PHASE1:Hg19::chr9:103791208..103791221,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54886|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=W|UniProt=Q8TBJ4|association_with_transcript=177bp_to_NM_207299,uc004bbb.2,uc011lvi.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_7_at_LPPR1_5end|id=chr9:103791208..103791221,+|ontology_enrichment_celltype=CL:0000047!4.36e-08!8;CL:0000540!3.16e-07!6;CL:0000031!3.16e-07!6;CL:0000404!3.16e-07!6|ontology_enrichment_celltype_v019=CL:0000540;2.96e-13;6!CL:0000404;2.96e-13;6|ontology_enrichment_celltype_v019_2=CL:0000047,8.65e-17,8;CL:0000540,3.50e-13,6;CL:0000031,3.50e-13,6;CL:0000404,3.50e-13,6|ontology_enrichment_development_v019=UBERON:0010122;2.41e-17;2!CL:0000031;2.96e-13;6!UBERON:0005425;7.82e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.16e-78!82;UBERON:0005743!3.06e-77!86;UBERON:0000073!1.54e-74!94;UBERON:0001016!1.54e-74!94;UBERON:0001049!6.89e-74!57;UBERON:0005068!6.89e-74!57;UBERON:0006241!6.89e-74!57;UBERON:0007135!6.89e-74!57;UBERON:0000955!4.71e-64!69;UBERON:0006238!4.71e-64!69;UBERON:0002616!9.79e-64!59;UBERON:0002780!1.05e-61!41;UBERON:0001890!1.05e-61!41;UBERON:0006240!1.05e-61!41;UBERON:0003080!4.97e-60!42;UBERON:0002020!1.19e-54!34;UBERON:0003528!1.19e-54!34;UBERON:0001893!1.63e-54!34;UBERON:0002791!2.20e-52!33;UBERON:0003075!5.91e-52!86;UBERON:0007284!5.91e-52!86;UBERON:0001869!2.06e-50!32;UBERON:0002346!4.39e-49!90;UBERON:0003056!6.85e-41!61;UBERON:0004121!2.64e-38!169;UBERON:0007023!3.34e-37!115;UBERON:0000924!4.47e-37!173;UBERON:0006601!4.47e-37!173;UBERON:0002619!1.17e-35!22;UBERON:0000956!2.79e-34!25;UBERON:0000203!2.79e-34!25;UBERON:0000033!5.59e-34!123;UBERON:0000153!8.18e-32!129;UBERON:0007811!8.18e-32!129;UBERON:0001950!3.58e-31!20;UBERON:0002308!1.48e-22!9;UBERON:0000125!1.48e-22!9;UBERON:0000025!2.83e-21!194;UBERON:0009663!4.38e-18!7;UBERON:0002420!1.19e-17!9;UBERON:0007245!1.19e-17!9;UBERON:0010009!1.19e-17!9;UBERON:0010011!1.19e-17!9;UBERON:0000454!1.19e-17!9;UBERON:0004111!2.48e-15!241;UBERON:0003076!1.08e-14!15;UBERON:0003057!1.08e-14!15;UBERON:0002298!4.29e-14!8;UBERON:0004732!7.34e-14!13;UBERON:0001872!8.08e-13!5;UBERON:0000483!2.44e-12!309;UBERON:0000119!4.37e-12!312;UBERON:0004733!9.41e-12!12;UBERON:0002028!9.41e-12!12;UBERON:0007277!9.41e-12!12;UBERON:0000477!1.44e-11!286;UBERON:0000369!1.53e-11!4;UBERON:0002435!1.53e-11!4;UBERON:0000204!1.53e-11!4;UBERON:0010082!1.53e-11!4;UBERON:0001871!6.57e-11!7;UBERON:0000200!4.10e-10!6;UBERON:0005383!4.71e-09!3;UBERON:0005382!4.71e-09!3;UBERON:0000475!5.49e-09!365;UBERON:0002021!1.06e-08!5;UBERON:0001894!1.26e-08!7;UBERON:0006222!1.26e-08!7;UBERON:0000349!1.32e-08!5;UBERON:0000988!1.98e-08!3;UBERON:0000064!2.49e-08!219;UBERON:0002771!4.39e-08!3;UBERON:0006331!5.74e-08!3;UBERON:0001896!1.02e-07!3;UBERON:0005290!1.02e-07!3;UBERON:0010096!1.02e-07!3;UBERON:0000922!1.13e-07!612;UBERON:0000923!6.66e-07!604;UBERON:0005291!6.66e-07!604;UBERON:0006598!6.66e-07!604;UBERON:0002532!6.66e-07!604;UBERON:0002050!7.31e-07!605;UBERON:0005423!7.31e-07!605|ontology_enrichment_uberon_v019=UBERON:0000369;3.13e-33;4!UBERON:0002435;3.13e-33;4!UBERON:0000204;3.13e-33;4!UBERON:0001869;1.67e-32;32!UBERON:0002791;2.04e-32;32!UBERON:0009663;2.70e-29;7!UBERON:0003528;1.75e-28;34!UBERON:0002020;1.75e-28;34!UBERON:0001893;2.77e-27;34!UBERON:0005383;1.79e-25;3!UBERON:0005382;1.79e-25;3!UBERON:0002420;8.78e-23;9!UBERON:0000125;8.78e-23;9!UBERON:0007245;8.78e-23;9!UBERON:0002308;8.78e-23;9!UBERON:0010009;8.78e-23;9!UBERON:0010011;8.78e-23;9!UBERON:0000454;8.78e-23;9!UBERON:0002780;4.91e-21;41!UBERON:0001890;4.91e-21;41!UBERON:0001873;2.41e-17;2!UBERON:0002619;3.84e-17;22!UBERON:0000956;4.43e-15;25!UBERON:0000203;4.43e-15;25!UBERON:0001950;4.99e-14;20!UBERON:0001017;8.71e-14;75!UBERON:0000955;2.48e-12;68!UBERON:0000073;1.43e-11;53!UBERON:0002616;1.43e-11;53!UBERON:0001016;6.42e-11;83!UBERON:0001874;6.58e-10;1!UBERON:0000941;7.82e-10;1!UBERON:0001785;7.82e-10;1!UBERON:0002464;7.82e-10;1!UBERON:0004904;7.82e-10;1!UBERON:0001021;7.82e-10;1!UBERON:0001882;1.55e-09;1!UBERON:0005403;1.55e-09;1!UBERON:0002021;1.03e-07;5!UBERON:0001872;1.11e-07;5!UBERON:0000349;1.77e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002791,1.93e-34,32;UBERON:0001869,1.93e-34,32;UBERON:0000369,1.60e-33,4;UBERON:0002435,1.60e-33,4;UBERON:0000204,1.60e-33,4;UBERON:0010082,1.60e-33,4;UBERON:0003528,2.32e-32,34;UBERON:0002020,2.32e-32,34;UBERON:0001893,2.32e-32,34;UBERON:0009663,1.22e-29,7;UBERON:0001016,1.24e-29,89;UBERON:0001017,1.49e-29,81;UBERON:0002780,1.22e-26,41;UBERON:0001890,1.22e-26,41;UBERON:0003080,1.22e-26,41;UBERON:0006240,1.22e-26,41;UBERON:0005383,1.58e-25,3;UBERON:0005382,1.58e-25,3;UBERON:0002420,4.73e-23,9;UBERON:0000125,4.73e-23,9;UBERON:0007245,4.73e-23,9;UBERON:0002308,4.73e-23,9;UBERON:0010009,4.73e-23,9;UBERON:0010011,4.73e-23,9;UBERON:0000454,4.73e-23,9;UBERON:0001049,1.45e-22,56;UBERON:0005068,1.45e-22,56;UBERON:0006241,1.45e-22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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt=Q8TBJ4 | |||
|association_with_transcript=177bp_to_NM_207299,uc004bbb.2,uc011lvi.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_7_at_LPPR1_5end | |||
|id=chr9:103791208..103791221,+ | |||
|ontology_enrichment_celltype=CL:0000047!4.36e-08!8;CL:0000540!3.16e-07!6;CL:0000031!3.16e-07!6;CL:0000404!3.16e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.96e-13;6!CL:0000404;2.96e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.65e-17,8;CL:0000540,3.50e-13,6;CL:0000031,3.50e-13,6;CL:0000404,3.50e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.41e-17;2!CL:0000031;2.96e-13;6!UBERON:0005425;7.82e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.16e-78!82;UBERON:0005743!3.06e-77!86;UBERON:0000073!1.54e-74!94;UBERON:0001016!1.54e-74!94;UBERON:0001049!6.89e-74!57;UBERON:0005068!6.89e-74!57;UBERON:0006241!6.89e-74!57;UBERON:0007135!6.89e-74!57;UBERON:0000955!4.71e-64!69;UBERON:0006238!4.71e-64!69;UBERON:0002616!9.79e-64!59;UBERON:0002780!1.05e-61!41;UBERON:0001890!1.05e-61!41;UBERON:0006240!1.05e-61!41;UBERON:0003080!4.97e-60!42;UBERON:0002020!1.19e-54!34;UBERON:0003528!1.19e-54!34;UBERON:0001893!1.63e-54!34;UBERON:0002791!2.20e-52!33;UBERON:0003075!5.91e-52!86;UBERON:0007284!5.91e-52!86;UBERON:0001869!2.06e-50!32;UBERON:0002346!4.39e-49!90;UBERON:0003056!6.85e-41!61;UBERON:0004121!2.64e-38!169;UBERON:0007023!3.34e-37!115;UBERON:0000924!4.47e-37!173;UBERON:0006601!4.47e-37!173;UBERON:0002619!1.17e-35!22;UBERON:0000956!2.79e-34!25;UBERON:0000203!2.79e-34!25;UBERON:0000033!5.59e-34!123;UBERON:0000153!8.18e-32!129;UBERON:0007811!8.18e-32!129;UBERON:0001950!3.58e-31!20;UBERON:0002308!1.48e-22!9;UBERON:0000125!1.48e-22!9;UBERON:0000025!2.83e-21!194;UBERON:0009663!4.38e-18!7;UBERON:0002420!1.19e-17!9;UBERON:0007245!1.19e-17!9;UBERON:0010009!1.19e-17!9;UBERON:0010011!1.19e-17!9;UBERON:0000454!1.19e-17!9;UBERON:0004111!2.48e-15!241;UBERON:0003076!1.08e-14!15;UBERON:0003057!1.08e-14!15;UBERON:0002298!4.29e-14!8;UBERON:0004732!7.34e-14!13;UBERON:0001872!8.08e-13!5;UBERON:0000483!2.44e-12!309;UBERON:0000119!4.37e-12!312;UBERON:0004733!9.41e-12!12;UBERON:0002028!9.41e-12!12;UBERON:0007277!9.41e-12!12;UBERON:0000477!1.44e-11!286;UBERON:0000369!1.53e-11!4;UBERON:0002435!1.53e-11!4;UBERON:0000204!1.53e-11!4;UBERON:0010082!1.53e-11!4;UBERON:0001871!6.57e-11!7;UBERON:0000200!4.10e-10!6;UBERON:0005383!4.71e-09!3;UBERON:0005382!4.71e-09!3;UBERON:0000475!5.49e-09!365;UBERON:0002021!1.06e-08!5;UBERON:0001894!1.26e-08!7;UBERON:0006222!1.26e-08!7;UBERON:0000349!1.32e-08!5;UBERON:0000988!1.98e-08!3;UBERON:0000064!2.49e-08!219;UBERON:0002771!4.39e-08!3;UBERON:0006331!5.74e-08!3;UBERON:0001896!1.02e-07!3;UBERON:0005290!1.02e-07!3;UBERON:0010096!1.02e-07!3;UBERON:0000922!1.13e-07!612;UBERON:0000923!6.66e-07!604;UBERON:0005291!6.66e-07!604;UBERON:0006598!6.66e-07!604;UBERON:0002532!6.66e-07!604;UBERON:0002050!7.31e-07!605;UBERON:0005423!7.31e-07!605 | |||
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|short_description=p7@LPPR1 | |||
}} |
Revision as of 06:42, 14 September 2013
Short description: | p7@LPPR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LPPR1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 177bp_to_NM_207299, uc004bbb.2, uc011lvi.1_5end |
EntrezGene: | LPPR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.65e-17 | 8 |
neuron | 3.50e-13 | 6 |
neuroblast | 3.50e-13 | 6 |
electrically signaling cell | 3.50e-13 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.