FFCP PHASE1:Hg19::chr10:116524662..116524709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=115bp_to_ENST00000436932,uc001lca.1_5end | |association_with_transcript=115bp_to_ENST00000436932,uc001lca.1_5end | ||
|cluster_id=chr10:116524662..116524709,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_1_at_ENST00000436932_5end,CAGE_peak_1_at_uc001lca.1_5end | |description=CAGE_peak_1_at_ENST00000436932_5end,CAGE_peak_1_at_uc001lca.1_5end | ||
|id=chr10:116524662..116524709,+ | |id=chr10:116524662..116524709,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.00e-26;82!UBERON:0006215;8.05e-13;3!UBERON:0010122;5.50e-10;2!UBERON:0006241;2.02e-07;3!UBERON:0003057;2.02e-07;3!UBERON:0002532;2.08e-07;206!UBERON:0010316;2.08e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.01e-99!57;UBERON:0005068!1.01e-99!57;UBERON:0006241!1.01e-99!57;UBERON:0007135!1.01e-99!57;UBERON:0002616!2.24e-82!59;UBERON:0007023!5.29e-81!115;UBERON:0001017!2.07e-78!82;UBERON:0005743!1.72e-77!86;UBERON:0000955!3.30e-75!69;UBERON:0006238!3.30e-75!69;UBERON:0003075!6.85e-75!86;UBERON:0007284!6.85e-75!86;UBERON:0002780!6.34e-73!41;UBERON:0001890!6.34e-73!41;UBERON:0006240!6.34e-73!41;UBERON:0000073!2.59e-72!94;UBERON:0001016!2.59e-72!94;UBERON:0002346!4.70e-71!90;UBERON:0003080!5.18e-71!42;UBERON:0002020!1.62e-63!34;UBERON:0003528!1.62e-63!34;UBERON:0001893!2.29e-63!34;UBERON:0002791!1.07e-60!33;UBERON:0001869!1.28e-57!32;UBERON:0003056!2.20e-49!61;UBERON:0002619!3.09e-44!22;UBERON:0000033!7.04e-42!123;UBERON:0000153!2.04e-39!129;UBERON:0007811!2.04e-39!129;UBERON:0001950!1.37e-38!20;UBERON:0000956!1.60e-38!25;UBERON:0000203!1.60e-38!25;UBERON:0004121!6.12e-37!169;UBERON:0000924!8.26e-36!173;UBERON:0006601!8.26e-36!173;UBERON:0003076!2.82e-28!15;UBERON:0003057!2.82e-28!15;UBERON:0000025!6.86e-28!194;UBERON:0002308!1.05e-27!9;UBERON:0000125!1.05e-27!9;UBERON:0002420!1.89e-27!9;UBERON:0007245!1.89e-27!9;UBERON:0010009!1.89e-27!9;UBERON:0010011!1.89e-27!9;UBERON:0000454!1.89e-27!9;UBERON:0004732!1.27e-22!13;UBERON:0009663!8.45e-22!7;UBERON:0004111!3.76e-21!241;UBERON:0004733!5.34e-20!12;UBERON:0002028!5.34e-20!12;UBERON:0007277!5.34e-20!12;UBERON:0002298!1.85e-19!8;UBERON:0000200!1.75e-18!6;UBERON:0000477!6.63e-17!286;UBERON:0000483!2.12e-16!309;UBERON:0000119!4.04e-16!312;UBERON:0000349!7.79e-16!5;UBERON:0001871!1.17e-13!7;UBERON:0000064!2.76e-13!219;UBERON:0000369!6.43e-13!4;UBERON:0002435!6.43e-13!4;UBERON:0000204!6.43e-13!4;UBERON:0010082!6.43e-13!4;UBERON:0000475!9.05e-13!365;UBERON:0002680!8.08e-12!9;UBERON:0001895!8.08e-12!9;UBERON:0010092!8.08e-12!9;UBERON:0001896!6.01e-11!3;UBERON:0005290!6.01e-11!3;UBERON:0010096!6.01e-11!3;UBERON:0001894!8.86e-11!7;UBERON:0006222!8.86e-11!7;UBERON:0002240!1.72e-10!3;UBERON:0006331!1.95e-10!3;UBERON:0000988!2.21e-10!3;UBERON:0001872!2.85e-10!5;UBERON:0005383!2.92e-10!3;UBERON:0005382!2.92e-10!3;UBERON:0002771!3.01e-10!3;UBERON:0002021!5.97e-10!5;UBERON:0000062!1.01e-08!511;UBERON:0000481!6.47e-08!347;UBERON:0001875!8.68e-08!2;UBERON:0006514!8.68e-08!2;UBERON:0002148!1.32e-07!2;UBERON:0009662!1.32e-07!2;UBERON:0005162!1.54e-07!2;UBERON:0000122!1.54e-07!2;UBERON:0001897!1.59e-07!2;UBERON:0001954!1.65e-07!2;UBERON:0003022!1.65e-07!2;UBERON:0002421!1.65e-07!2;UBERON:0002600!1.65e-07!2;UBERON:0001873!2.05e-07!2;UBERON:0010122!2.05e-07!2;UBERON:0001870!2.33e-07!2;UBERON:0001876!2.40e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!1.01e-99!57;UBERON:0005068!1.01e-99!57;UBERON:0006241!1.01e-99!57;UBERON:0007135!1.01e-99!57;UBERON:0002616!2.24e-82!59;UBERON:0007023!5.29e-81!115;UBERON:0001017!2.07e-78!82;UBERON:0005743!1.72e-77!86;UBERON:0000955!3.30e-75!69;UBERON:0006238!3.30e-75!69;UBERON:0003075!6.85e-75!86;UBERON:0007284!6.85e-75!86;UBERON:0002780!6.34e-73!41;UBERON:0001890!6.34e-73!41;UBERON:0006240!6.34e-73!41;UBERON:0000073!2.59e-72!94;UBERON:0001016!2.59e-72!94;UBERON:0002346!4.70e-71!90;UBERON:0003080!5.18e-71!42;UBERON:0002020!1.62e-63!34;UBERON:0003528!1.62e-63!34;UBERON:0001893!2.29e-63!34;UBERON:0002791!1.07e-60!33;UBERON:0001869!1.28e-57!32;UBERON:0003056!2.20e-49!61;UBERON:0002619!3.09e-44!22;UBERON:0000033!7.04e-42!123;UBERON:0000153!2.04e-39!129;UBERON:0007811!2.04e-39!129;UBERON:0001950!1.37e-38!20;UBERON:0000956!1.60e-38!25;UBERON:0000203!1.60e-38!25;UBERON:0004121!6.12e-37!169;UBERON:0000924!8.26e-36!173;UBERON:0006601!8.26e-36!173;UBERON:0003076!2.82e-28!15;UBERON:0003057!2.82e-28!15;UBERON:0000025!6.86e-28!194;UBERON:0002308!1.05e-27!9;UBERON:0000125!1.05e-27!9;UBERON:0002420!1.89e-27!9;UBERON:0007245!1.89e-27!9;UBERON:0010009!1.89e-27!9;UBERON:0010011!1.89e-27!9;UBERON:0000454!1.89e-27!9;UBERON:0004732!1.27e-22!13;UBERON:0009663!8.45e-22!7;UBERON:0004111!3.76e-21!241;UBERON:0004733!5.34e-20!12;UBERON:0002028!5.34e-20!12;UBERON:0007277!5.34e-20!12;UBERON:0002298!1.85e-19!8;UBERON:0000200!1.75e-18!6;UBERON:0000477!6.63e-17!286;UBERON:0000483!2.12e-16!309;UBERON:0000119!4.04e-16!312;UBERON:0000349!7.79e-16!5;UBERON:0001871!1.17e-13!7;UBERON:0000064!2.76e-13!219;UBERON:0000369!6.43e-13!4;UBERON:0002435!6.43e-13!4;UBERON:0000204!6.43e-13!4;UBERON:0010082!6.43e-13!4;UBERON:0000475!9.05e-13!365;UBERON:0002680!8.08e-12!9;UBERON:0001895!8.08e-12!9;UBERON:0010092!8.08e-12!9;UBERON:0001896!6.01e-11!3;UBERON:0005290!6.01e-11!3;UBERON:0010096!6.01e-11!3;UBERON:0001894!8.86e-11!7;UBERON:0006222!8.86e-11!7;UBERON:0002240!1.72e-10!3;UBERON:0006331!1.95e-10!3;UBERON:0000988!2.21e-10!3;UBERON:0001872!2.85e-10!5;UBERON:0005383!2.92e-10!3;UBERON:0005382!2.92e-10!3;UBERON:0002771!3.01e-10!3;UBERON:0002021!5.97e-10!5;UBERON:0000062!1.01e-08!511;UBERON:0000481!6.47e-08!347;UBERON:0001875!8.68e-08!2;UBERON:0006514!8.68e-08!2;UBERON:0002148!1.32e-07!2;UBERON:0009662!1.32e-07!2;UBERON:0005162!1.54e-07!2;UBERON:0000122!1.54e-07!2;UBERON:0001897!1.59e-07!2;UBERON:0001954!1.65e-07!2;UBERON:0003022!1.65e-07!2;UBERON:0002421!1.65e-07!2;UBERON:0002600!1.65e-07!2;UBERON:0001873!2.05e-07!2;UBERON:0010122!2.05e-07!2;UBERON:0001870!2.33e-07!2;UBERON:0001876!2.40e-07!2 | ||
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|short_description=p1@ENST00000436932,p1@uc001lca.1 | |short_description=p1@ENST00000436932,p1@uc001lca.1 | ||
}} | }} |
Latest revision as of 10:41, 23 July 2015
Short description: | p1@ENST00000436932, p1@uc001lca.1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000436932_5end, CAGE_peak_1_at_uc001lca.1_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | 115bp_to_ENST00000436932, uc001lca.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data