FFCP PHASE1:Hg19::chr12:16757977..16757995,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:16757977..16757995,- to FFCP PHASE1:Hg19::chr12:16757977..16757995,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55885 | |EntrezGene=55885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6643 | |HGNC=6643 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439600_5end | |||
|cluster_id=chr12:16757977..16757995,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_12_at_LMO3_5end | |||
|id=chr12:16757977..16757995,- | |||
|ontology_enrichment_celltype=CL:0000136!5.44e-08!15 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.99e-13;82!UBERON:0010122;2.59e-08;2 | |||
|ontology_enrichment_disease=DOID:171!8.75e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.66e-59!115;UBERON:0001049!2.13e-56!57;UBERON:0005068!2.13e-56!57;UBERON:0006241!2.13e-56!57;UBERON:0007135!2.13e-56!57;UBERON:0001017!1.57e-49!82;UBERON:0000073!5.35e-49!94;UBERON:0001016!5.35e-49!94;UBERON:0005743!3.57e-48!86;UBERON:0002616!1.02e-46!59;UBERON:0000955!7.82e-46!69;UBERON:0006238!7.82e-46!69;UBERON:0003080!2.73e-44!42;UBERON:0002780!5.34e-43!41;UBERON:0001890!5.34e-43!41;UBERON:0006240!5.34e-43!41;UBERON:0002346!8.69e-40!90;UBERON:0001869!4.34e-39!32;UBERON:0001893!4.43e-39!34;UBERON:0002020!2.01e-38!34;UBERON:0003528!2.01e-38!34;UBERON:0002791!1.99e-37!33;UBERON:0003075!6.50e-37!86;UBERON:0007284!6.50e-37!86;UBERON:0002619!1.31e-33!22;UBERON:0001950!2.85e-30!20;UBERON:0000956!8.08e-29!25;UBERON:0000203!8.08e-29!25;UBERON:0003056!2.17e-28!61;UBERON:0000153!1.56e-23!129;UBERON:0007811!1.56e-23!129;UBERON:0000924!3.89e-23!173;UBERON:0006601!3.89e-23!173;UBERON:0000033!2.97e-22!123;UBERON:0004121!4.82e-21!169;UBERON:0003076!6.98e-13!15;UBERON:0003057!6.98e-13!15;UBERON:0000025!1.60e-12!194;UBERON:0002420!1.46e-11!9;UBERON:0007245!1.46e-11!9;UBERON:0010009!1.46e-11!9;UBERON:0010011!1.46e-11!9;UBERON:0000454!1.46e-11!9;UBERON:0002308!6.31e-11!9;UBERON:0000125!6.31e-11!9;UBERON:0000200!7.68e-11!6;UBERON:0004111!1.57e-10!241;UBERON:0001871!1.93e-10!7;UBERON:0002298!9.55e-10!8;UBERON:0000349!1.04e-09!5;UBERON:0000475!1.94e-09!365;UBERON:0004733!2.45e-09!12;UBERON:0002028!2.45e-09!12;UBERON:0007277!2.45e-09!12;UBERON:0002021!3.69e-09!5;UBERON:0001872!4.01e-09!5;UBERON:0000477!1.28e-08!286;UBERON:0009663!1.42e-08!7;UBERON:0004732!1.83e-08!13;UBERON:0000483!3.49e-08!309;UBERON:0000119!6.09e-08!312;UBERON:0000369!1.31e-07!4;UBERON:0002435!1.31e-07!4;UBERON:0000204!1.31e-07!4;UBERON:0010082!1.31e-07!4;UBERON:0000922!1.55e-07!612;UBERON:0000481!6.54e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.04e-65;32!UBERON:0001893;2.45e-63;34!UBERON:0002619;3.60e-63;22!UBERON:0002791;1.23e-61;32!UBERON:0001950;1.14e-55;20!UBERON:0003528;1.74e-55;34!UBERON:0002020;1.74e-55;34!UBERON:0000956;2.82e-55;25!UBERON:0000203;2.82e-55;25!UBERON:0002780;3.76e-52;41!UBERON:0001890;3.76e-52;41!UBERON:0000073;1.02e-40;53!UBERON:0002616;1.02e-40;53!UBERON:0000955;1.21e-31;68!UBERON:0001017;3.92e-28;75!UBERON:0000200;8.75e-23;6!UBERON:0001016;1.03e-20;83!UBERON:0000349;3.86e-20;5!UBERON:0002420;8.10e-20;9!UBERON:0007245;8.10e-20;9!UBERON:0010009;8.10e-20;9!UBERON:0010011;8.10e-20;9!UBERON:0000454;8.10e-20;9!UBERON:0001871;1.70e-19;6!UBERON:0000369;2.59e-15;4!UBERON:0002435;2.59e-15;4!UBERON:0000204;2.59e-15;4!UBERON:0009663;3.22e-13;7!UBERON:0002021;1.06e-12;5!UBERON:0001872;1.41e-12;5!UBERON:0001870;2.11e-12;3!UBERON:0007023;3.10e-12;114!UBERON:0001896;1.24e-11;3!UBERON:0005383;1.24e-11;3!UBERON:0005290;1.24e-11;3!UBERON:0005382;1.24e-11;3!UBERON:0002298;3.08e-10;6!UBERON:0000125;3.23e-10;9!UBERON:0002308;3.23e-10;9!UBERON:0011216;6.92e-10;132!UBERON:0001954;2.75e-09;2!UBERON:0003022;2.75e-09;2!UBERON:0002421;2.75e-09;2!UBERON:0002600;2.75e-09;2!UBERON:0001876;6.93e-09;2!UBERON:0002771;1.06e-08;2!UBERON:0002702;1.06e-08;2!UBERON:0001873;2.59e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001893,1.74e-73,34;UBERON:0001869,1.33e-72,32;UBERON:0002780,1.50e-69,41;UBERON:0001890,1.50e-69,41;UBERON:0003080,1.50e-69,41;UBERON:0006240,1.50e-69,41;UBERON:0000073,2.89e-69,53;UBERON:0002616,2.89e-69,53;UBERON:0002791,1.18e-66,32;UBERON:0001049,3.47e-65,56;UBERON:0005068,3.47e-65,56;UBERON:0006241,3.47e-65,56;UBERON:0007135,3.47e-65,56;UBERON:0000955,1.12e-62,68;UBERON:0006238,1.12e-62,68;UBERON:0003528,1.79e-62,34;UBERON:0002020,1.79e-62,34;UBERON:0002619,1.80e-62,22;UBERON:0001017,3.54e-61,81;UBERON:0001016,1.35e-57,89;UBERON:0001950,4.80e-55,20;UBERON:0000956,1.16e-54,25;UBERON:0000203,1.16e-54,25;UBERON:0003056,1.01e-44,61;UBERON:0002346,1.32e-42,86;UBERON:0003075,3.44e-42,82;UBERON:0007284,3.44e-42,82;UBERON:0007023,3.80e-42,114;UBERON:0010371,9.32e-34,104;UBERON:0004121,2.86e-29,171;UBERON:0000924,2.86e-29,171;UBERON:0006601,2.86e-29,171;UBERON:0011216,3.35e-27,223;UBERON:0010314,6.09e-25,132;UBERON:0000200,1.73e-22,6;UBERON:0000349,6.27e-20,5;UBERON:0002420,1.04e-19,9;UBERON:0007245,1.04e-19,9;UBERON:0010009,1.04e-19,9;UBERON:0010011,1.04e-19,9;UBERON:0000454,1.04e-19,9;UBERON:0001871,3.69e-19,6;UBERON:0000369,3.34e-15,4;UBERON:0002435,3.34e-15,4;UBERON:0000204,3.34e-15,4;UBERON:0010082,3.34e-15,4;UBERON:0000025,1.47e-13,192;UBERON:0009663,2.89e-13,7;UBERON:0004111,6.26e-13,240;UBERON:0001872,1.16e-12,5;UBERON:0002021,1.39e-12,5;UBERON:0001870,4.23e-12,3;UBERON:0001896,6.41e-12,3;UBERON:0005290,6.41e-12,3;UBERON:0010096,6.41e-12,3;UBERON:0005383,1.88e-11,3;UBERON:0005382,1.88e-11,3;UBERON:0002298,2.07e-10,6;UBERON:0000125,2.98e-10,9;UBERON:0002308,2.98e-10,9;UBERON:0001954,3.24e-09,2;UBERON:0003022,3.24e-09,2;UBERON:0002421,3.24e-09,2;UBERON:0002600,3.24e-09,2;UBERON:0001876,1.13e-08,2;UBERON:0002771,1.37e-08,2;UBERON:0002702,2.16e-08,2;UBERON:0000923,2.66e-08,560;UBERON:0010316,2.66e-08,560;UBERON:0005291,2.66e-08,560;UBERON:0006598,2.66e-08,560;UBERON:0010317,2.66e-08,560;UBERON:0002532,2.66e-08,560;UBERON:0001873,2.91e-08,2;UBERON:0010122,2.91e-08,2;UBERON:0002050,3.65e-08,564;UBERON:0005423,1.33e-07,581;UBERON:0000483,1.42e-07,306;UBERON:0000119,2.00e-07,309;UBERON:0000922,2.95e-07,592 | |||
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| ||
|short_description=p12@LMO3 | |||
}} | }} |
Latest revision as of 16:15, 17 September 2015
Short description: | p12@LMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_LMO3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000439600_5end |
EntrezGene: | LMO3 |
HGNC: | 6643 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data