FFCP PHASE1:Hg19::chr2:55254171..55254186,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQC3 | |UniProt=Q9NQC3 | ||
|association_with_transcript=-379bp_to_AF063601_5end | |association_with_transcript=-379bp_to_AF063601_5end | ||
|cluster_id=chr2:55254171..55254186,- | |||
|coexpression_cluster_id=C261 | |coexpression_cluster_id=C261 | ||
|description=CAGE_peak_30_at_RTN4_5end | |description=CAGE_peak_30_at_RTN4_5end | ||
|id=chr2:55254171..55254186,- | |id=chr2:55254171..55254186,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.49e-20;3!UBERON:0003057;3.49e-20;3!UBERON:0006601;4.16e-10;82!UBERON:0005425;7.21e-08;1!UBERON:0006222;1.39e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.13e-57!57;UBERON:0005068!7.13e-57!57;UBERON:0006241!7.13e-57!57;UBERON:0007135!7.13e-57!57;UBERON:0002616!2.46e-48!59;UBERON:0001017!2.96e-48!82;UBERON:0000073!8.39e-48!94;UBERON:0001016!8.39e-48!94;UBERON:0005743!2.09e-45!86;UBERON:0002780!1.05e-44!41;UBERON:0001890!1.05e-44!41;UBERON:0006240!1.05e-44!41;UBERON:0000955!9.42e-44!69;UBERON:0006238!9.42e-44!69;UBERON:0003080!1.96e-43!42;UBERON:0002020!9.43e-39!34;UBERON:0003528!9.43e-39!34;UBERON:0001893!5.91e-38!34;UBERON:0007023!1.07e-37!115;UBERON:0003075!1.64e-37!86;UBERON:0007284!1.64e-37!86;UBERON:0002791!2.13e-36!33;UBERON:0002346!2.78e-35!90;UBERON:0001869!2.13e-34!32;UBERON:0002619!1.84e-32!22;UBERON:0001950!3.45e-28!20;UBERON:0000956!4.94e-28!25;UBERON:0000203!4.94e-28!25;UBERON:0003056!3.90e-27!61;UBERON:0004121!1.10e-22!169;UBERON:0000033!4.25e-22!123;UBERON:0000924!7.87e-22!173;UBERON:0006601!7.87e-22!173;UBERON:0000153!1.00e-21!129;UBERON:0007811!1.00e-21!129;UBERON:0003076!4.59e-14!15;UBERON:0003057!4.59e-14!15;UBERON:0001871!6.38e-14!7;UBERON:0000025!1.17e-13!194;UBERON:0002298!1.32e-13!8;UBERON:0002308!4.59e-12!9;UBERON:0000125!4.59e-12!9;UBERON:0000349!5.31e-12!5;UBERON:0002420!5.70e-12!9;UBERON:0007245!5.70e-12!9;UBERON:0010009!5.70e-12!9;UBERON:0010011!5.70e-12!9;UBERON:0000454!5.70e-12!9;UBERON:0004732!1.92e-10!13;UBERON:0004111!8.36e-10!241;UBERON:0000200!1.24e-09!6;UBERON:0004733!9.93e-09!12;UBERON:0002028!9.93e-09!12;UBERON:0007277!9.93e-09!12;UBERON:0000988!3.19e-08!3;UBERON:0001872!3.67e-08!5;UBERON:0002240!3.75e-08!3;UBERON:0001894!4.80e-08!7;UBERON:0006222!4.80e-08!7;UBERON:0002771!4.83e-08!3;UBERON:0009663!5.03e-08!7;UBERON:0006331!5.30e-08!3;UBERON:0000477!1.71e-07!286;UBERON:0001896!2.41e-07!3;UBERON:0005290!2.41e-07!3;UBERON:0010096!2.41e-07!3;UBERON:0000483!6.59e-07!309 | |ontology_enrichment_uberon=UBERON:0001049!7.13e-57!57;UBERON:0005068!7.13e-57!57;UBERON:0006241!7.13e-57!57;UBERON:0007135!7.13e-57!57;UBERON:0002616!2.46e-48!59;UBERON:0001017!2.96e-48!82;UBERON:0000073!8.39e-48!94;UBERON:0001016!8.39e-48!94;UBERON:0005743!2.09e-45!86;UBERON:0002780!1.05e-44!41;UBERON:0001890!1.05e-44!41;UBERON:0006240!1.05e-44!41;UBERON:0000955!9.42e-44!69;UBERON:0006238!9.42e-44!69;UBERON:0003080!1.96e-43!42;UBERON:0002020!9.43e-39!34;UBERON:0003528!9.43e-39!34;UBERON:0001893!5.91e-38!34;UBERON:0007023!1.07e-37!115;UBERON:0003075!1.64e-37!86;UBERON:0007284!1.64e-37!86;UBERON:0002791!2.13e-36!33;UBERON:0002346!2.78e-35!90;UBERON:0001869!2.13e-34!32;UBERON:0002619!1.84e-32!22;UBERON:0001950!3.45e-28!20;UBERON:0000956!4.94e-28!25;UBERON:0000203!4.94e-28!25;UBERON:0003056!3.90e-27!61;UBERON:0004121!1.10e-22!169;UBERON:0000033!4.25e-22!123;UBERON:0000924!7.87e-22!173;UBERON:0006601!7.87e-22!173;UBERON:0000153!1.00e-21!129;UBERON:0007811!1.00e-21!129;UBERON:0003076!4.59e-14!15;UBERON:0003057!4.59e-14!15;UBERON:0001871!6.38e-14!7;UBERON:0000025!1.17e-13!194;UBERON:0002298!1.32e-13!8;UBERON:0002308!4.59e-12!9;UBERON:0000125!4.59e-12!9;UBERON:0000349!5.31e-12!5;UBERON:0002420!5.70e-12!9;UBERON:0007245!5.70e-12!9;UBERON:0010009!5.70e-12!9;UBERON:0010011!5.70e-12!9;UBERON:0000454!5.70e-12!9;UBERON:0004732!1.92e-10!13;UBERON:0004111!8.36e-10!241;UBERON:0000200!1.24e-09!6;UBERON:0004733!9.93e-09!12;UBERON:0002028!9.93e-09!12;UBERON:0007277!9.93e-09!12;UBERON:0000988!3.19e-08!3;UBERON:0001872!3.67e-08!5;UBERON:0002240!3.75e-08!3;UBERON:0001894!4.80e-08!7;UBERON:0006222!4.80e-08!7;UBERON:0002771!4.83e-08!3;UBERON:0009663!5.03e-08!7;UBERON:0006331!5.30e-08!3;UBERON:0000477!1.71e-07!286;UBERON:0001896!2.41e-07!3;UBERON:0005290!2.41e-07!3;UBERON:0010096!2.41e-07!3;UBERON:0000483!6.59e-07!309 | ||
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|short_description=p30@RTN4 | |short_description=p30@RTN4 | ||
}} | }} |
Latest revision as of 16:49, 17 September 2015
Short description: | p30@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_RTN4_5end |
Coexpression cluster: | C261_locus_medial_parietal_pons_diencephalon_olfactory_spinal |
Association with transcript: | -379bp_to_AF063601_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data