FFCP PHASE1:Hg19::chr11:61717816..61717838,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:61717816..61717838,+
|short_description=p1@BEST1
|description=CAGE_peak_1_at_BEST1_5end
|association_with_transcript=0bp_to_ENST00000435278,ENST0000052487...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7439 | |EntrezGene=7439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12703 | |HGNC=12703 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z375 | |UniProt=B7Z375 | ||
|association_with_transcript=0bp_to_ENST00000435278,ENST00000524877,ENST00000524926,ENST00000529265,ENST00000533521_5end | |||
|cluster_id=chr11:61717816..61717838,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_BEST1_5end | |||
|id=chr11:61717816..61717838,+ | |||
|ontology_enrichment_celltype=CL:0000147!3.04e-15!14;CL:0000148!8.59e-12!10;CL:0000541!8.59e-12!10;CL:0000149!1.90e-08!4;CL:0002567!4.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000147;1.27e-16;14!CL:0000148;1.98e-14;10!CL:0002567;3.35e-10;3!CL:0000149;8.77e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.27e-16,14;CL:0000148,1.94e-14,10;CL:0000541,1.94e-14,10;CL:0002567,3.20e-10,3;CL:0000149,8.87e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.45e-22;82!UBERON:0006241;5.87e-10;3!UBERON:0003057;5.87e-10;3!UBERON:0006215;1.42e-08;3!UBERON:0010122;3.77e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.32e-07,2 | |||
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| ||
|short_description=p1@BEST1 | |||
}} | }} |
Latest revision as of 17:38, 18 September 2015
Short description: | p1@BEST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BEST1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000435278, ENST00000524877, ENST00000524926, ENST00000529265, ENST00000533521_5end |
EntrezGene: | BEST1 |
HGNC: | 12703 |
UniProt: | B7Z375 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.27e-16 | 14 |
melanocyte | 1.94e-14 | 10 |
melanoblast | 1.94e-14 | 10 |
light melanocyte | 3.20e-10 | 3 |
visual pigment cell | 8.87e-08 | 4 |
Ontology term | p-value | n |
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