FFCP PHASE1:Hg19::chr10:95517616..95517650,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:95517616..95517650,+ to FFCP PHASE1:Hg19::chr10:95517616..95517650,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9211 | |EntrezGene=9211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6572 | |HGNC=6572 | ||
|TSSclassifier=strong | |||
|UniProt=O95970 | |UniProt=O95970 | ||
|association_with_transcript=0bp_to_ENST00000371418_5end | |||
|cluster_id=chr10:95517616..95517650,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_LGI1_5end | |||
|id=chr10:95517616..95517650,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.58e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-21;82!UBERON:0006215;1.01e-09;3!UBERON:0006241;7.87e-09;3!UBERON:0003057;7.87e-09;3!UBERON:0010122;1.56e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.31e-68!57;UBERON:0005068!7.31e-68!57;UBERON:0006241!7.31e-68!57;UBERON:0007135!7.31e-68!57;UBERON:0005743!2.00e-62!86;UBERON:0002616!1.75e-61!59;UBERON:0000073!1.97e-60!94;UBERON:0001016!1.97e-60!94;UBERON:0003075!3.99e-60!86;UBERON:0007284!3.99e-60!86;UBERON:0001017!1.19e-59!82;UBERON:0002346!1.50e-56!90;UBERON:0000955!1.50e-56!69;UBERON:0006238!1.50e-56!69;UBERON:0002780!2.48e-55!41;UBERON:0001890!2.48e-55!41;UBERON:0006240!2.48e-55!41;UBERON:0007023!2.26e-54!115;UBERON:0003080!1.04e-53!42;UBERON:0003056!1.29e-46!61;UBERON:0001893!2.56e-45!34;UBERON:0002020!3.68e-45!34;UBERON:0003528!3.68e-45!34;UBERON:0002791!1.09e-43!33;UBERON:0001869!1.43e-42!32;UBERON:0000153!1.46e-42!129;UBERON:0007811!1.46e-42!129;UBERON:0000033!3.35e-41!123;UBERON:0004121!1.18e-36!169;UBERON:0002619!1.23e-36!22;UBERON:0000924!2.78e-35!173;UBERON:0006601!2.78e-35!173;UBERON:0001950!2.99e-33!20;UBERON:0000956!1.91e-31!25;UBERON:0000203!1.91e-31!25;UBERON:0000025!1.03e-15!194;UBERON:0002420!1.69e-15!9;UBERON:0007245!1.69e-15!9;UBERON:0010009!1.69e-15!9;UBERON:0010011!1.69e-15!9;UBERON:0000454!1.69e-15!9;UBERON:0002308!4.12e-15!9;UBERON:0000125!4.12e-15!9;UBERON:0003076!8.46e-15!15;UBERON:0003057!8.46e-15!15;UBERON:0004111!8.64e-14!241;UBERON:0000475!8.69e-14!365;UBERON:0000064!1.12e-13!219;UBERON:0001871!1.29e-13!7;UBERON:0000477!1.32e-13!286;UBERON:0000481!2.52e-13!347;UBERON:0009663!2.56e-12!7;UBERON:0000483!8.15e-12!309;UBERON:0000119!1.66e-11!312;UBERON:0001894!3.38e-11!7;UBERON:0006222!3.38e-11!7;UBERON:0000200!4.95e-11!6;UBERON:0004733!7.02e-11!12;UBERON:0002028!7.02e-11!12;UBERON:0007277!7.02e-11!12;UBERON:0002298!3.04e-10!8;UBERON:0000922!3.89e-10!612;UBERON:0004732!7.30e-10!13;UBERON:0000349!9.34e-10!5;UBERON:0000062!1.39e-09!511;UBERON:0000468!3.72e-09!659;UBERON:0001872!3.84e-09!5;UBERON:0002021!6.70e-09!5;UBERON:0000369!2.70e-08!4;UBERON:0002435!2.70e-08!4;UBERON:0000204!2.70e-08!4;UBERON:0010082!2.70e-08!4;UBERON:0000923!3.21e-07!604;UBERON:0005291!3.21e-07!604;UBERON:0006598!3.21e-07!604;UBERON:0002532!3.21e-07!604;UBERON:0002050!3.66e-07!605;UBERON:0005423!3.66e-07!605;UBERON:0002680!8.21e-07!9;UBERON:0001895!8.21e-07!9;UBERON:0010092!8.21e-07!9;UBERON:0003296!8.67e-07!4;UBERON:0010133!8.67e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.58e-68;41!UBERON:0001890;2.58e-68;41!UBERON:0001893;4.62e-66;34!UBERON:0003528;5.89e-66;34!UBERON:0002020;5.89e-66;34!UBERON:0001869;6.11e-66;32!UBERON:0002791;1.59e-65;32!UBERON:0000073;7.13e-63;53!UBERON:0002616;7.13e-63;53!UBERON:0002619;3.21e-62;22!UBERON:0001950;2.48e-56;20!UBERON:0000956;2.92e-54;25!UBERON:0000203;2.92e-54;25!UBERON:0001017;1.54e-43;75!UBERON:0000955;1.74e-40;68!UBERON:0001016;1.80e-34;83!UBERON:0002420;1.74e-25;9!UBERON:0007245;1.74e-25;9!UBERON:0010009;1.74e-25;9!UBERON:0010011;1.74e-25;9!UBERON:0000454;1.74e-25;9!UBERON:0000125;6.93e-25;9!UBERON:0002308;6.93e-25;9!UBERON:0009663;5.24e-20;7!UBERON:0001871;1.02e-19;6!UBERON:0004733;1.65e-18;12!UBERON:0002028;1.65e-18;12!UBERON:0001894;3.49e-18;7!UBERON:0000200;6.18e-18;6!UBERON:0002298;2.64e-17;6!UBERON:0004732;6.14e-17;13!UBERON:0007023;1.10e-16;114!UBERON:0000349;1.13e-15;5!UBERON:0011216;2.51e-15;132!UBERON:0001872;1.41e-14;5!UBERON:0002021;3.56e-14;5!UBERON:0000369;3.60e-13;4!UBERON:0002435;3.60e-13;4!UBERON:0000204;3.60e-13;4!UBERON:0002680;2.07e-11;9!UBERON:0001895;2.07e-11;9!UBERON:0002784;6.06e-11;4!UBERON:0003296;1.39e-10;4!UBERON:0010133;1.39e-10;4!UBERON:0005383;1.85e-10;3!UBERON:0005382;1.85e-10;3!UBERON:0010314;5.59e-10;132!UBERON:0001870;6.80e-10;3!UBERON:0001896;1.63e-09;3!UBERON:0005290;1.63e-09;3!UBERON:0000988;1.70e-09;3!UBERON:0002240;7.87e-09;3!UBERON:0005174;7.87e-09;3!UBERON:0001137;7.87e-09;3!UBERON:0001873;1.56e-07;2!UBERON:0001954;1.85e-07;2!UBERON:0003022;1.85e-07;2!UBERON:0002421;1.85e-07;2!UBERON:0002600;1.85e-07;2!UBERON:0001876;3.58e-07;2!UBERON:0002771;3.69e-07;2!UBERON:0004121;4.37e-07;165!UBERON:0002702;4.89e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.33e-121,56;UBERON:0005068,2.33e-121,56;UBERON:0006241,2.33e-121,56;UBERON:0007135,2.33e-121,56;UBERON:0000073,1.22e-113,53;UBERON:0002616,1.22e-113,53;UBERON:0001017,3.48e-97,81;UBERON:0000955,8.67e-97,68;UBERON:0006238,8.67e-97,68;UBERON:0002780,7.14e-96,41;UBERON:0001890,7.14e-96,41;UBERON:0003080,7.14e-96,41;UBERON:0006240,7.14e-96,41;UBERON:0001016,2.60e-86,89;UBERON:0003075,4.28e-86,82;UBERON:0007284,4.28e-86,82;UBERON:0002346,1.64e-81,86;UBERON:0001893,1.89e-78,34;UBERON:0003528,3.56e-78,34;UBERON:0002020,3.56e-78,34;UBERON:0001869,1.13e-73,32;UBERON:0002791,4.01e-73,32;UBERON:0010371,3.27e-65,104;UBERON:0003056,5.01e-65,61;UBERON:0002619,2.87e-62,22;UBERON:0001950,2.19e-56,20;UBERON:0007023,2.00e-54,114;UBERON:0000956,2.65e-54,25;UBERON:0000203,2.65e-54,25;UBERON:0010314,4.65e-53,132;UBERON:0004121,4.38e-46,171;UBERON:0000924,4.38e-46,171;UBERON:0006601,4.38e-46,171;UBERON:0011216,3.93e-36,223;UBERON:0000025,1.52e-26,192;UBERON:0002420,1.33e-25,9;UBERON:0007245,1.33e-25,9;UBERON:0010009,1.33e-25,9;UBERON:0010011,1.33e-25,9;UBERON:0000454,1.33e-25,9;UBERON:0003076,2.61e-25,15;UBERON:0003057,2.61e-25,15;UBERON:0000125,6.20e-25,9;UBERON:0002308,6.20e-25,9;UBERON:0004111,1.03e-20,240;UBERON:0009663,4.17e-20,7;UBERON:0001871,1.16e-19,6;UBERON:0004733,1.75e-18,12;UBERON:0002028,1.75e-18,12;UBERON:0007277,1.75e-18,12;UBERON:0001894,3.59e-18,7;UBERON:0006222,3.59e-18,7;UBERON:0000200,6.94e-18,6;UBERON:0002298,2.84e-17,6;UBERON:0004732,6.45e-17,13;UBERON:0000349,1.10e-15,5;UBERON:0001872,1.26e-14,5;UBERON:0000483,2.39e-14,306;UBERON:0002021,3.28e-14,5;UBERON:0000119,4.41e-14,309;UBERON:0000369,3.60e-13,4;UBERON:0002435,3.60e-13,4;UBERON:0000204,3.60e-13,4;UBERON:0010082,3.60e-13,4;UBERON:0002680,2.23e-11,9;UBERON:0001895,2.23e-11,9;UBERON:0010092,2.23e-11,9;UBERON:0002784,6.57e-11,4;UBERON:0003296,1.39e-10,4;UBERON:0010133,1.39e-10,4;UBERON:0005383,1.86e-10,3;UBERON:0005382,1.86e-10,3;UBERON:0001870,6.51e-10,3;UBERON:0001896,1.56e-09,3;UBERON:0005290,1.56e-09,3;UBERON:0010096,1.56e-09,3;UBERON:0000988,1.91e-09,3;UBERON:0000922,5.00e-09,592;UBERON:0002240,8.67e-09,3;UBERON:0005174,8.67e-09,3;UBERON:0001137,8.67e-09,3;UBERON:0001873,1.56e-07,2;UBERON:0010122,1.56e-07,2;UBERON:0001954,1.87e-07,2;UBERON:0003022,1.87e-07,2;UBERON:0002421,1.87e-07,2;UBERON:0002600,1.87e-07,2;UBERON:0000923,2.41e-07,560;UBERON:0010316,2.41e-07,560;UBERON:0005291,2.41e-07,560;UBERON:0006598,2.41e-07,560;UBERON:0010317,2.41e-07,560;UBERON:0002532,2.41e-07,560;UBERON:0001876,3.43e-07,2;UBERON:0002050,3.46e-07,564;UBERON:0005423,3.89e-07,581;UBERON:0002771,4.10e-07,2;UBERON:0002702,4.89e-07,2 | |||
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| ||
|short_description=p2@LGI1 | |||
}} | }} |
Latest revision as of 01:50, 20 September 2015
Short description: | p2@LGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LGI1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000371418_5end |
EntrezGene: | LGI1 |
HGNC: | 6572 |
UniProt: | O95970 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data