FFCP PHASE1:Hg19::chr19:30016925..30016951,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:30016925..30016951,+ | |||
|coexpression_cluster_id=C1816 | |||
|description=CAGE_peak_at_chr19:30016925..30016951,+ | |||
|id=chr19:30016925..30016951,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.05e-09!5;CL:0000540!2.41e-07!6;CL:0000031!2.41e-07!6;CL:0000404!2.41e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.58e-19;82!UBERON:0006215;3.41e-10;3!UBERON:0010122;1.35e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.67e-67!82;UBERON:0001049!8.89e-67!57;UBERON:0005068!8.89e-67!57;UBERON:0006241!8.89e-67!57;UBERON:0007135!8.89e-67!57;UBERON:0005743!1.95e-65!86;UBERON:0000073!5.33e-60!94;UBERON:0001016!5.33e-60!94;UBERON:0002616!4.50e-55!59;UBERON:0000955!2.84e-54!69;UBERON:0006238!2.84e-54!69;UBERON:0001893!1.20e-51!34;UBERON:0002020!2.79e-51!34;UBERON:0003528!2.79e-51!34;UBERON:0002346!5.49e-51!90;UBERON:0002780!7.75e-51!41;UBERON:0001890!7.75e-51!41;UBERON:0006240!7.75e-51!41;UBERON:0003075!5.80e-50!86;UBERON:0007284!5.80e-50!86;UBERON:0002791!1.02e-49!33;UBERON:0003080!2.18e-49!42;UBERON:0001869!1.26e-47!32;UBERON:0002619!2.83e-37!22;UBERON:0003056!3.59e-37!61;UBERON:0000956!4.80e-35!25;UBERON:0000203!4.80e-35!25;UBERON:0001950!1.96e-33!20;UBERON:0007023!2.89e-33!115;UBERON:0000924!7.52e-30!173;UBERON:0006601!7.52e-30!173;UBERON:0000033!8.22e-29!123;UBERON:0004121!1.21e-28!169;UBERON:0000153!8.48e-27!129;UBERON:0007811!8.48e-27!129;UBERON:0002420!3.49e-18!9;UBERON:0007245!3.49e-18!9;UBERON:0010009!3.49e-18!9;UBERON:0010011!3.49e-18!9;UBERON:0000454!3.49e-18!9;UBERON:0003076!1.02e-17!15;UBERON:0003057!1.02e-17!15;UBERON:0002308!1.13e-17!9;UBERON:0000125!1.13e-17!9;UBERON:0009663!3.94e-14!7;UBERON:0000025!3.95e-13!194;UBERON:0001871!4.95e-13!7;UBERON:0004733!9.60e-13!12;UBERON:0002028!9.60e-13!12;UBERON:0007277!9.60e-13!12;UBERON:0000200!1.03e-12!6;UBERON:0002298!1.50e-12!8;UBERON:0004732!1.32e-11!13;UBERON:0000349!1.63e-11!5;UBERON:0001872!7.82e-11!5;UBERON:0000064!2.35e-10!219;UBERON:0000369!8.11e-09!4;UBERON:0002435!8.11e-09!4;UBERON:0000204!8.11e-09!4;UBERON:0010082!8.11e-09!4;UBERON:0004111!4.32e-08!241;UBERON:0002680!7.22e-08!9;UBERON:0001895!7.22e-08!9;UBERON:0010092!7.22e-08!9;UBERON:0002021!2.60e-07!5;UBERON:0000988!3.53e-07!3;UBERON:0000475!3.68e-07!365;UBERON:0006331!4.07e-07!3;UBERON:0001896!4.15e-07!3;UBERON:0005290!4.15e-07!3;UBERON:0010096!4.15e-07!3;UBERON:0002771!5.41e-07!3;UBERON:0002240!6.23e-07!3;UBERON:0005383!7.31e-07!3;UBERON:0005382!7.31e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.50e-67;34!UBERON:0002020;1.50e-67;34!UBERON:0001893;1.86e-67;34!UBERON:0002791;1.44e-65;32!UBERON:0001869;1.44e-65;32!UBERON:0002619;3.09e-61;22!UBERON:0000073;5.54e-58;53!UBERON:0002616;5.54e-58;53!UBERON:0002780;4.50e-57;41!UBERON:0001890;4.50e-57;41!UBERON:0001950;6.44e-55;20!UBERON:0000956;1.65e-53;25!UBERON:0000203;1.65e-53;25!UBERON:0000955;6.52e-39;68!UBERON:0001017;2.64e-37;75!UBERON:0001016;9.43e-31;83!UBERON:0002420;5.68e-29;9!UBERON:0007245;5.68e-29;9!UBERON:0010009;5.68e-29;9!UBERON:0010011;5.68e-29;9!UBERON:0000454;5.68e-29;9!UBERON:0000125;4.49e-28;9!UBERON:0002308;4.49e-28;9!UBERON:0009663;2.59e-22;7!UBERON:0004733;1.30e-20;12!UBERON:0002028;1.30e-20;12!UBERON:0000200;5.20e-20;6!UBERON:0002298;1.41e-19;6!UBERON:0004732;6.77e-19;13!UBERON:0000349;8.03e-18;5!UBERON:0001871;8.58e-18;6!UBERON:0001872;7.04e-17;5!UBERON:0007023;1.65e-14;114!UBERON:0000369;1.62e-13;4!UBERON:0002435;1.62e-13;4!UBERON:0000204;1.62e-13;4!UBERON:0002680;1.52e-12;9!UBERON:0001895;1.52e-12;9!UBERON:0011216;2.55e-12;132!UBERON:0002021;2.72e-11;5!UBERON:0001870;7.20e-11;3!UBERON:0000988;1.15e-10;3!UBERON:0001896;1.23e-10;3!UBERON:0005290;1.23e-10;3!UBERON:0005383;2.50e-10;3!UBERON:0005382;2.50e-10;3!UBERON:0010314;1.00e-08;132!UBERON:0001876;2.17e-08;2!UBERON:0001954;6.09e-08;2!UBERON:0003022;6.09e-08;2!UBERON:0002421;6.09e-08;2!UBERON:0002600;6.09e-08;2!UBERON:0002702;8.43e-08;2!UBERON:0001897;1.16e-07;2!UBERON:0010225;1.16e-07;2!UBERON:0001873;1.35e-07;2!UBERON:0002771;1.60e-07;2!UBERON:0002148;1.86e-07;2!UBERON:0006331;1.86e-07;2!UBERON:0009662;1.86e-07;2!UBERON:0001875;2.54e-07;2!UBERON:0006514;2.54e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.65e-106,56;UBERON:0005068,8.65e-106,56;UBERON:0006241,8.65e-106,56;UBERON:0007135,8.65e-106,56;UBERON:0000073,1.63e-101,53;UBERON:0002616,1.63e-101,53;UBERON:0000955,2.75e-88,68;UBERON:0006238,2.75e-88,68;UBERON:0001017,5.89e-84,81;UBERON:0002780,7.02e-81,41;UBERON:0001890,7.02e-81,41;UBERON:0003080,7.02e-81,41;UBERON:0006240,7.02e-81,41;UBERON:0001893,7.87e-81,34;UBERON:0003528,3.10e-80,34;UBERON:0002020,3.10e-80,34;UBERON:0001016,6.37e-78,89;UBERON:0003075,2.55e-76,82;UBERON:0007284,2.55e-76,82;UBERON:0002791,3.11e-74,32;UBERON:0001869,3.29e-74,32;UBERON:0002346,2.65e-72,86;UBERON:0002619,3.11e-61,22;UBERON:0003056,6.08e-59,61;UBERON:0010371,5.14e-58,104;UBERON:0001950,7.45e-55,20;UBERON:0000956,1.67e-53,25;UBERON:0000203,1.67e-53,25;UBERON:0007023,1.04e-46,114;UBERON:0010314,8.12e-46,132;UBERON:0004121,1.72e-39,171;UBERON:0000924,1.72e-39,171;UBERON:0006601,1.72e-39,171;UBERON:0011216,1.16e-30,223;UBERON:0002420,5.61e-29,9;UBERON:0007245,5.61e-29,9;UBERON:0010009,5.61e-29,9;UBERON:0010011,5.61e-29,9;UBERON:0000454,5.61e-29,9;UBERON:0000125,3.95e-28,9;UBERON:0002308,3.95e-28,9;UBERON:0000025,1.49e-26,192;UBERON:0003076,1.32e-24,15;UBERON:0003057,1.32e-24,15;UBERON:0009663,2.82e-22,7;UBERON:0004733,1.05e-20,12;UBERON:0002028,1.05e-20,12;UBERON:0007277,1.05e-20,12;UBERON:0000200,6.17e-20,6;UBERON:0002298,8.32e-20,6;UBERON:0004111,4.41e-19,240;UBERON:0004732,5.56e-19,13;UBERON:0000349,5.90e-18,5;UBERON:0001871,8.35e-18,6;UBERON:0001872,7.79e-17,5;UBERON:0000483,2.01e-14,306;UBERON:0000119,3.55e-14,309;UBERON:0000369,1.63e-13,4;UBERON:0002435,1.63e-13,4;UBERON:0000204,1.63e-13,4;UBERON:0010082,1.63e-13,4;UBERON:0002680,1.40e-12,9;UBERON:0001895,1.40e-12,9;UBERON:0010092,1.40e-12,9;UBERON:0002021,2.62e-11,5;UBERON:0001870,7.71e-11,3;UBERON:0000988,7.98e-11,3;UBERON:0001896,1.04e-10,3;UBERON:0005290,1.04e-10,3;UBERON:0010096,1.04e-10,3;UBERON:0005383,2.63e-10,3;UBERON:0005382,2.63e-10,3;UBERON:0001876,1.95e-08,2;UBERON:0000922,3.85e-08,592;UBERON:0001954,5.22e-08,2;UBERON:0003022,5.22e-08,2;UBERON:0002421,5.22e-08,2;UBERON:0002600,5.22e-08,2;UBERON:0002702,9.03e-08,2;UBERON:0001873,1.22e-07,2;UBERON:0010122,1.22e-07,2;UBERON:0001897,1.27e-07,2;UBERON:0010225,1.27e-07,2;UBERON:0002148,1.50e-07,2;UBERON:0006331,1.50e-07,2;UBERON:0009662,1.50e-07,2;UBERON:0002771,1.65e-07,2;UBERON:0000923,2.18e-07,560;UBERON:0010316,2.18e-07,560;UBERON:0005291,2.18e-07,560;UBERON:0006598,2.18e-07,560;UBERON:0010317,2.18e-07,560;UBERON:0002532,2.18e-07,560;UBERON:0001875,2.54e-07,2;UBERON:0006514,2.54e-07,2;UBERON:0002050,3.01e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,1.06023814657188,0.580969714347592,0.621966330092223,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,5.10093781890338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.514137463516618,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,5.96488588659779,6.89280140411512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.78304294485554,25.9497937401552,0,0,0,0,0,0,0,0,0.173624994933292,4.42870692906919,1.80894657938112,1.52581736317083,1.43753037910592,3.25102380848902,2.85201016300164,0,0,0.846452843541768,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,9.03175181941072,0,5.62234669740814,0,0,0,0,0,6.1214552326098,0.189559738885464,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,2.93774963014692,0,0,3.41878298161745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,1.64286454670392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97614844904652,4.494712401682,0.482259445395058,0.137539436597234,0,0,0,6.01420610914444,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36135686540031,1.98348902614035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,2.80660409274515,3.004582336956,2.29363678276028,1.99672292766334,5.40238705590036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,2.21213497842769,0,0,0,0,0,0,0,0,0,0,0,0,2.48830904013189,1.15104934173287,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,4.49604575675217,0,1.75597244962866,3.48697819209284,21.426094178846,4.28774965278151,4.68279372332368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11979266172207,1.56215619722769,1.44680757550829,4.12202766260394,6.56369770821863,0,0.496211178389294,0,0,0,0,0,0,0,0,0,4.82585104135505,4.53832137583659,0,0,0,1.41404030924402,0,0,0,0,1.00067161847319,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80544290488219,0,0,2.11347980993343,0,0,0,0,0,1.96308467114945,0.594092800654172,21.5554421067534,0,0,0,0,0,0,0,0,0,4.15684791139209,0,5.575302195655,6.98161104544604,0,0,0,0,0,0.437062287854782,0,0.407955318967927,1.06886962106224,0.275684698604535,1.50424523575425,0,0,3.31667775783512,2.48239190068549,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:30016925..30016951,+ | |||
}} |
Latest revision as of 06:04, 26 July 2015
Short description: | p@chr19:30016925..30016951, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:30016925..30016951, + |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data