FFCP PHASE1:Hg19::chr16:51185318..51185348,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:51185318..51185348,- to FFCP PHASE1:Hg19::chr16:51185318..51185348,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6299 | |EntrezGene=6299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10524 | |HGNC=10524 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSC2 | |UniProt=Q9NSC2 | ||
|association_with_transcript=-135bp_to_NM_002968,uc010cbv.2,uc010vgs.1_5end | |||
|cluster_id=chr16:51185318..51185348,- | |||
|description=CAGE_peak_2_at_SALL1_5end | |||
|id=chr16:51185318..51185348,- | |||
|ontology_enrichment_celltype=CL:0002319!6.07e-11!25;CL:0000243!1.95e-07!15;CL:0000125!1.95e-07!15;CL:0000030!1.95e-07!15;CL:0000339!1.95e-07!15;CL:0000055!3.24e-07!180;CL:0000047!6.18e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.59e-13;25!CL:1000507;1.28e-09;10!CL:1000494;1.28e-09;10!CL:0000128;6.33e-08;7!CL:0000126;6.33e-08;7!CL:0000127;6.33e-08;7!CL:0000243;1.48e-07;15!CL:0000125;1.48e-07;15!CL:0000540;2.80e-07;6!CL:0000404;2.80e-07;6!CL:1000497;6.25e-07;17!CL:0002518;6.25e-07;17!CL:1000449;7.98e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-13,25;CL:1000507,9.03e-10,10;CL:1000494,9.03e-10,10;CL:0000047,1.04e-09,8;CL:0000128,6.40e-08,7;CL:0000126,6.40e-08,7;CL:0000127,6.40e-08,7;CL:0002453,6.40e-08,7;CL:0000243,1.27e-07,15;CL:0000125,1.27e-07,15;CL:0000030,1.27e-07,15;CL:0000339,1.27e-07,15;CL:0000540,3.48e-07,6;CL:0000031,3.48e-07,6;CL:0000404,3.48e-07,6;CL:1000497,5.52e-07,17;CL:0002518,5.52e-07,17;CL:1000449,7.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.26e-12;82!UBERON:0006238;1.15e-07;10!CL:0000339;1.48e-07;15!CL:0000031;2.80e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.50e-52!82;UBERON:0005743!2.56e-49!86;UBERON:0000073!2.81e-46!94;UBERON:0001016!2.81e-46!94;UBERON:0001049!2.85e-43!57;UBERON:0005068!2.85e-43!57;UBERON:0006241!2.85e-43!57;UBERON:0007135!2.85e-43!57;UBERON:0000955!1.55e-42!69;UBERON:0006238!1.55e-42!69;UBERON:0002616!5.14e-36!59;UBERON:0002780!2.83e-33!41;UBERON:0001890!2.83e-33!41;UBERON:0006240!2.83e-33!41;UBERON:0003080!5.28e-32!42;UBERON:0003075!1.22e-31!86;UBERON:0007284!1.22e-31!86;UBERON:0002346!4.26e-31!90;UBERON:0002020!7.02e-28!34;UBERON:0003528!7.02e-28!34;UBERON:0001893!8.33e-28!34;UBERON:0002791!4.62e-27!33;UBERON:0001869!5.95e-26!32;UBERON:0003056!1.28e-23!61;UBERON:0000033!3.97e-23!123;UBERON:0000924!2.19e-22!173;UBERON:0006601!2.19e-22!173;UBERON:0004121!2.42e-22!169;UBERON:0000153!2.75e-22!129;UBERON:0007811!2.75e-22!129;UBERON:0000025!1.32e-21!194;UBERON:0000475!3.70e-21!365;UBERON:0007023!4.12e-21!115;UBERON:0000956!1.57e-20!25;UBERON:0000203!1.57e-20!25;UBERON:0002619!4.44e-18!22;UBERON:0001950!2.17e-16!20;UBERON:0000119!5.55e-16!312;UBERON:0004111!1.13e-15!241;UBERON:0000483!4.71e-15!309;UBERON:0000468!5.66e-15!659;UBERON:0000467!1.36e-13!625;UBERON:0000480!1.89e-13!626;UBERON:0000062!4.38e-13!511;UBERON:0000477!1.71e-12!286;UBERON:0000481!2.14e-12!347;UBERON:0003076!4.19e-12!15;UBERON:0003057!4.19e-12!15;UBERON:0000922!6.38e-12!612;UBERON:0004732!1.51e-10!13;UBERON:0004733!1.13e-09!12;UBERON:0002028!1.13e-09!12;UBERON:0007277!1.13e-09!12;UBERON:0002050!2.10e-09!605;UBERON:0005423!2.10e-09!605;UBERON:0000923!4.40e-09!604;UBERON:0005291!4.40e-09!604;UBERON:0006598!4.40e-09!604;UBERON:0002532!4.40e-09!604;UBERON:0002308!9.00e-09!9;UBERON:0000125!9.00e-09!9;UBERON:0002420!1.07e-08!9;UBERON:0007245!1.07e-08!9;UBERON:0010009!1.07e-08!9;UBERON:0010011!1.07e-08!9;UBERON:0000454!1.07e-08!9;UBERON:0000064!5.28e-08!219;UBERON:0001871!1.46e-07!7;UBERON:0002680!3.00e-07!9;UBERON:0001895!3.00e-07!9;UBERON:0010092!3.00e-07!9;UBERON:0000489!3.14e-07!32;UBERON:0009663!4.58e-07!7;UBERON:0001894!7.86e-07!7;UBERON:0006222!7.86e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.35e-35;34!UBERON:0002020;1.35e-35;34!UBERON:0002780;1.56e-35;41!UBERON:0001890;1.56e-35;41!UBERON:0001893;1.61e-35;34!UBERON:0002791;2.79e-35;32!UBERON:0000073;3.51e-35;53!UBERON:0002616;3.51e-35;53!UBERON:0001869;5.01e-35;32!UBERON:0000956;2.14e-30;25!UBERON:0000203;2.14e-30;25!UBERON:0000955;4.10e-27;68!UBERON:0002619;1.23e-26;22!UBERON:0001017;3.07e-26;75!UBERON:0001950;4.49e-24;20!UBERON:0001016;4.82e-23;83!UBERON:0004732;4.00e-15;13!UBERON:0004733;8.38e-14;12!UBERON:0002028;8.38e-14;12!UBERON:0000125;1.89e-12;9!UBERON:0002308;1.89e-12;9!UBERON:0002420;2.57e-12;9!UBERON:0007245;2.57e-12;9!UBERON:0010009;2.57e-12;9!UBERON:0010011;2.57e-12;9!UBERON:0000454;2.57e-12;9!UBERON:0002680;3.83e-10;9!UBERON:0001895;3.83e-10;9!UBERON:0000489;5.85e-10;29!UBERON:0009663;7.11e-10;7!UBERON:0004211;1.28e-09;10!UBERON:0009773;1.28e-09;10!UBERON:0001231;1.28e-09;10!UBERON:0004810;1.28e-09;10!UBERON:0001894;1.84e-09;7!UBERON:0001871;2.04e-09;6!UBERON:0002298;3.42e-09;6!UBERON:0000200;2.09e-08;6!UBERON:0002113;2.95e-08;24!UBERON:0011143;2.95e-08;24!UBERON:0007023;4.61e-08;114!UBERON:0000349;7.46e-08;5!UBERON:0011216;3.17e-07;132!UBERON:0002784;6.35e-07;4!UBERON:0001872;6.92e-07;5!UBERON:0006555;7.98e-07;15!UBERON:0004819;7.98e-07;15!UBERON:0001285;7.98e-07;15!UBERON:0007684;7.98e-07;15 | |||
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| ||
|short_description=p2@SALL1 | |||
}} | }} |
Latest revision as of 21:35, 16 September 2015
Short description: | p2@SALL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SALL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -135bp_to_NM_002968, uc010cbv.2, uc010vgs.1_5end |
EntrezGene: | SALL1 |
HGNC: | 10524 |
UniProt: | Q9NSC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.59e-13 | 25 |
kidney tubule cell | 9.03e-10 | 10 |
nephron tubule epithelial cell | 9.03e-10 | 10 |
neuronal stem cell | 1.04e-09 | 8 |
oligodendrocyte | 6.40e-08 | 7 |
macroglial cell | 6.40e-08 | 7 |
astrocyte | 6.40e-08 | 7 |
oligodendrocyte precursor cell | 6.40e-08 | 7 |
glial cell (sensu Vertebrata) | 1.27e-07 | 15 |
glial cell | 1.27e-07 | 15 |
glioblast | 1.27e-07 | 15 |
glioblast (sensu Vertebrata) | 1.27e-07 | 15 |
neuron | 3.48e-07 | 6 |
neuroblast | 3.48e-07 | 6 |
electrically signaling cell | 3.48e-07 | 6 |
kidney cell | 5.52e-07 | 17 |
kidney epithelial cell | 5.52e-07 | 17 |
epithelial cell of nephron | 7.10e-07 | 15 |