FFCP PHASE1:Hg19::chr18:60646359..60646379,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:60646359..60646379,+|id=chr18:60646359..60646379,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000081;5.06e-10;11!CL:0000775;1.10e-09;3!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4|ontology_enrichment_celltype_v019_2=CL:0000081,4.83e-10,11;CL:0000775,1.01e-09,3;CL:0000306,1.59e-07,4;CL:0002222,1.59e-07,4;CL:0002224,1.59e-07,4|ontology_enrichment_development_v019=UBERON:0005425;7.62e-26;1!UBERON:0003056;1.53e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.02e-25!57;UBERON:0005068!2.02e-25!57;UBERON:0006241!2.02e-25!57;UBERON:0007135!2.02e-25!57;UBERON:0002020!1.56e-23!34;UBERON:0003528!1.56e-23!34;UBERON:0001893!4.14e-23!34;UBERON:0002780!8.52e-23!41;UBERON:0001890!8.52e-23!41;UBERON:0006240!8.52e-23!41;UBERON:0002616!1.05e-22!59;UBERON:0002791!3.21e-22!33;UBERON:0005743!3.71e-22!86;UBERON:0003080!5.18e-22!42;UBERON:0001017!1.37e-21!82;UBERON:0000073!5.61e-21!94;UBERON:0001016!5.61e-21!94;UBERON:0001869!7.87e-21!32;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0000955!1.66e-20!69;UBERON:0006238!1.66e-20!69;UBERON:0003056!4.21e-19!61;UBERON:0002346!4.69e-19!90;UBERON:0000956!1.45e-17!25;UBERON:0000203!1.45e-17!25;UBERON:0002619!3.89e-17!22;UBERON:0001950!6.27e-17!20;UBERON:0007023!1.84e-16!115;UBERON:0000153!8.14e-13!129;UBERON:0007811!8.14e-13!129;UBERON:0000033!9.35e-13!123;UBERON:0004121!9.72e-11!169;UBERON:0000924!3.98e-10!173;UBERON:0006601!3.98e-10!173;UBERON:0001871!1.56e-08!7;UBERON:0000200!3.69e-08!6;UBERON:0002420!1.65e-07!9;UBERON:0007245!1.65e-07!9;UBERON:0010009!1.65e-07!9;UBERON:0010011!1.65e-07!9;UBERON:0000454!1.65e-07!9;UBERON:0002308!2.05e-07!9;UBERON:0000125!2.05e-07!9;UBERON:0001872!8.35e-07!5|ontology_enrichment_uberon_v019=UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0000349;8.12e-21;5!UBERON:0001871;2.65e-15;6!UBERON:0002771;7.30e-14;2!UBERON:0001876;7.30e-14;2!UBERON:0001954;1.21e-13;2!UBERON:0003714;1.21e-13;2!UBERON:0001875;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2!UBERON:0003022;1.21e-13;2!UBERON:0002421;1.21e-13;2!UBERON:0006514;1.21e-13;2!UBERON:0002600;1.21e-13;2!UBERON:0002420;4.94e-12;9!UBERON:0007245;4.94e-12;9!UBERON:0010009;4.94e-12;9!UBERON:0010011;4.94e-12;9!UBERON:0000454;4.94e-12;9!UBERON:0002791;1.24e-11;32!UBERON:0001869;1.24e-11;32!UBERON:0001893;4.42e-11;34!UBERON:0002619;1.93e-10;22!UBERON:0003528;3.91e-10;34!UBERON:0002020;3.91e-10;34!UBERON:0000956;2.59e-09;25!UBERON:0000203;2.59e-09;25!UBERON:0010077;1.80e-07;4!UBERON:0005389;1.80e-07;4!UBERON:0000484;1.80e-07;4!UBERON:0000965;1.80e-07;4!UBERON:0001803;1.80e-07;4!UBERON:0002780;6.16e-07;41!UBERON:0001890;6.16e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0000349,9.93e-21,5;UBERON:0001871,2.85e-15,6;UBERON:0003056,1.78e-14,61;UBERON:0001876,7.30e-14,2;UBERON:0002771,8.28e-14,2;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0001875,1.37e-13,2;UBERON:0006514,1.37e-13,2;UBERON:0001954,1.55e-13,2;UBERON:0003022,1.55e-13,2;UBERON:0002421,1.55e-13,2;UBERON:0002600,1.55e-13,2;UBERON:0002791,1.94e-12,32;UBERON:0001869,1.94e-12,32;UBERON:0002420,5.22e-12,9;UBERON:0007245,5.22e-12,9;UBERON:0010009,5.22e-12,9;UBERON:0010011,5.22e-12,9;UBERON:0000454,5.22e-12,9;UBERON:0003528,9.36e-12,34;UBERON:0002020,9.36e-12,34;UBERON:0001893,9.36e-12,34;UBERON:0003075,7.67e-11,82;UBERON:0007284,7.67e-11,82;UBERON:0002619,2.12e-10,22;UBERON:0002346,2.40e-10,86;UBERON:0002780,7.23e-10,41;UBERON:0001890,7.23e-10,41;UBERON:0003080,7.23e-10,41;UBERON:0006240,7.23e-10,41;UBERON:0000956,2.82e-09,25;UBERON:0000203,2.82e-09,25;UBERON:0010371,1.40e-08,104;UBERON:0000073,9.26e-08,53;UBERON:0002616,9.26e-08,53;UBERON:0010077,1.59e-07,4;UBERON:0005389,1.59e-07,4;UBERON:0000484,1.59e-07,4;UBERON:0002546,1.59e-07,4;UBERON:0000965,1.59e-07,4;UBERON:0001803,1.59e-07,4;UBERON:0003073,1.59e-07,4;UBERON:0005426,1.59e-07,4;UBERON:0001781,1.69e-07,4;UBERON:0001049,2.27e-07,56;UBERON:0005068,2.27e-07,56;UBERON:0006241,2.27e-07,56;UBERON:0007135,2.27e-07,56;UBERON:0001016,6.05e-07,89;UBERON:0010314,9.02e-07,132|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0.752969358170419,0,0,0.612167784741805,0,0,0.32985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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:60646359..60646379,+ | |||
|id=chr18:60646359..60646379,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000081;5.06e-10;11!CL:0000775;1.10e-09;3!CL:0000306;1.80e-07;4!CL:0002222;1.80e-07;4!CL:0002224;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000081,4.83e-10,11;CL:0000775,1.01e-09,3;CL:0000306,1.59e-07,4;CL:0002222,1.59e-07,4;CL:0002224,1.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.62e-26;1!UBERON:0003056;1.53e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr18:60646359..60646379,+ | |||
}} |
Revision as of 17:59, 11 September 2013
Short description: | p@chr18:60646359..60646379, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:60646359..60646379, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood cell | 4.83e-10 | 11 |
neutrophil | 1.01e-09 | 3 |
crystallin accumulating cell | 1.59e-07 | 4 |
vertebrate lens cell | 1.59e-07 | 4 |
lens epithelial cell | 1.59e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.