FFCP PHASE1:Hg19::chr20:21487030..21487048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:21487030..21487048,- | |||
|description=CAGE_peak_at_chr20:21487030..21487048,- | |description=CAGE_peak_at_chr20:21487030..21487048,- | ||
|id=chr20:21487030..21487048,- | |id=chr20:21487030..21487048,- | ||
|ontology_enrichment_celltype=CL:0002322!3.18e-07!5 | |ontology_enrichment_celltype=CL:0002322!3.18e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.22e-11;5!CL:0002127;2.49e-07;1!CL:0000911;2.49e-07;1!CL:0000814;2.49e-07;1 | |ontology_enrichment_celltype_v019=CL:0002322;2.22e-11;5!CL:0002127;2.49e-07;1!CL:0000911;2.49e-07;1!CL:0000814;2.49e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.67e-11,5;CL:0002127,4.90e-07,1;CL:0000914,4.90e-07,1;CL:0000911,4.90e-07,1;CL:0000814,4.90e-07,1;CL:0002042,4.90e-07,1;CL:0002039,4.90e-07,1;CL:0002040,4.90e-07,1;CL:0002041,4.90e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.49e-07;1 | |ontology_enrichment_development_v019=UBERON:0005425;2.49e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:225;2.49e-07;1!DOID:5409;6.44e-07;4 | |ontology_enrichment_disease_v019=DOID:225;2.49e-07;1!DOID:5409;6.44e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:225,2.21e-07,1;DOID:5409,5.89e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.50e-25!57;UBERON:0005068!3.50e-25!57;UBERON:0006241!3.50e-25!57;UBERON:0007135!3.50e-25!57;UBERON:0000073!2.63e-23!94;UBERON:0001016!2.63e-23!94;UBERON:0001017!6.79e-23!82;UBERON:0005743!2.85e-22!86;UBERON:0002780!5.12e-21!41;UBERON:0001890!5.12e-21!41;UBERON:0006240!5.12e-21!41;UBERON:0003080!2.75e-20!42;UBERON:0002020!2.36e-19!34;UBERON:0003528!2.36e-19!34;UBERON:0002616!2.66e-19!59;UBERON:0001893!2.67e-19!34;UBERON:0002791!2.20e-18!33;UBERON:0003075!4.16e-18!86;UBERON:0007284!4.16e-18!86;UBERON:0000955!1.16e-17!69;UBERON:0006238!1.16e-17!69;UBERON:0002346!1.56e-17!90;UBERON:0001869!6.19e-17!32;UBERON:0004121!3.26e-16!169;UBERON:0000924!5.21e-16!173;UBERON:0006601!5.21e-16!173;UBERON:0003056!6.54e-14!61;UBERON:0002619!2.23e-12!22;UBERON:0002420!3.53e-12!9;UBERON:0007245!3.53e-12!9;UBERON:0010009!3.53e-12!9;UBERON:0010011!3.53e-12!9;UBERON:0000454!3.53e-12!9;UBERON:0002308!4.03e-12!9;UBERON:0000125!4.03e-12!9;UBERON:0000956!2.32e-10!25;UBERON:0000203!2.32e-10!25;UBERON:0001950!3.74e-10!20;UBERON:0000483!6.11e-10!309;UBERON:0007023!8.89e-10!115;UBERON:0009663!1.03e-09!7;UBERON:0000119!1.25e-09!312;UBERON:0000033!6.44e-09!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0000349!9.83e-08!5 | |ontology_enrichment_uberon=UBERON:0001049!3.50e-25!57;UBERON:0005068!3.50e-25!57;UBERON:0006241!3.50e-25!57;UBERON:0007135!3.50e-25!57;UBERON:0000073!2.63e-23!94;UBERON:0001016!2.63e-23!94;UBERON:0001017!6.79e-23!82;UBERON:0005743!2.85e-22!86;UBERON:0002780!5.12e-21!41;UBERON:0001890!5.12e-21!41;UBERON:0006240!5.12e-21!41;UBERON:0003080!2.75e-20!42;UBERON:0002020!2.36e-19!34;UBERON:0003528!2.36e-19!34;UBERON:0002616!2.66e-19!59;UBERON:0001893!2.67e-19!34;UBERON:0002791!2.20e-18!33;UBERON:0003075!4.16e-18!86;UBERON:0007284!4.16e-18!86;UBERON:0000955!1.16e-17!69;UBERON:0006238!1.16e-17!69;UBERON:0002346!1.56e-17!90;UBERON:0001869!6.19e-17!32;UBERON:0004121!3.26e-16!169;UBERON:0000924!5.21e-16!173;UBERON:0006601!5.21e-16!173;UBERON:0003056!6.54e-14!61;UBERON:0002619!2.23e-12!22;UBERON:0002420!3.53e-12!9;UBERON:0007245!3.53e-12!9;UBERON:0010009!3.53e-12!9;UBERON:0010011!3.53e-12!9;UBERON:0000454!3.53e-12!9;UBERON:0002308!4.03e-12!9;UBERON:0000125!4.03e-12!9;UBERON:0000956!2.32e-10!25;UBERON:0000203!2.32e-10!25;UBERON:0001950!3.74e-10!20;UBERON:0000483!6.11e-10!309;UBERON:0007023!8.89e-10!115;UBERON:0009663!1.03e-09!7;UBERON:0000119!1.25e-09!312;UBERON:0000033!6.44e-09!123;UBERON:0000153!1.30e-08!129;UBERON:0007811!1.30e-08!129;UBERON:0000349!9.83e-08!5 | ||
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|short_description=p@chr20:21487030..21487048,- | |short_description=p@chr20:21487030..21487048,- | ||
}} | }} |
Latest revision as of 12:23, 28 July 2015
Short description: | p@chr20:21487030..21487048, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:21487030..21487048, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.67e-11 | 5 |
innate effector T cell | 4.90e-07 | 1 |
immature NK T cell | 4.90e-07 | 1 |
effector T cell | 4.90e-07 | 1 |
mature NK T cell | 4.90e-07 | 1 |
immature NK T cell stage IV | 4.90e-07 | 1 |
immature NK T cell stage I | 4.90e-07 | 1 |
immature NK T cell stage II | 4.90e-07 | 1 |
immature NK T cell stage III | 4.90e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
syndrome | 2.21e-07 | 1 |
lung small cell carcinoma | 5.89e-07 | 4 |