FFCP PHASE1:Hg19::chr17:76227225..76227250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283999 | |EntrezGene=283999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27563 | |HGNC=27563 | ||
|TSSclassifier=strong | |||
|UniProt=A6NFC5 | |UniProt=A6NFC5 | ||
|association_with_transcript=-140bp_to_ENST00000374946,ENST00000421688,ENST00000543327,NM_001204210,NM_001204211,NM_001204212,uc010dhm.1_5end | |association_with_transcript=-140bp_to_ENST00000374946,ENST00000421688,ENST00000543327,NM_001204210,NM_001204211,NM_001204212,uc010dhm.1_5end | ||
|cluster_id=chr17:76227225..76227250,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_TMEM235_5end | |description=CAGE_peak_4_at_TMEM235_5end | ||
|id=chr17:76227225..76227250,+ | |id=chr17:76227225..76227250,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.74e-22;82!UBERON:0010122;5.22e-12;2!UBERON:0002532;1.04e-07;206!UBERON:0010316;1.04e-07;206!UBERON:0005425;2.95e-07;1!UBERON:0006222;7.60e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.97e-114!57;UBERON:0005068!3.97e-114!57;UBERON:0006241!3.97e-114!57;UBERON:0007135!3.97e-114!57;UBERON:0002616!3.46e-94!59;UBERON:0001017!4.67e-92!82;UBERON:0005743!1.91e-87!86;UBERON:0000955!5.32e-87!69;UBERON:0006238!5.32e-87!69;UBERON:0002780!1.66e-85!41;UBERON:0001890!1.66e-85!41;UBERON:0006240!1.66e-85!41;UBERON:0002020!9.23e-84!34;UBERON:0003528!9.23e-84!34;UBERON:0001893!1.36e-83!34;UBERON:0003080!2.43e-83!42;UBERON:0000073!1.73e-82!94;UBERON:0001016!1.73e-82!94;UBERON:0003075!1.84e-80!86;UBERON:0007284!1.84e-80!86;UBERON:0002791!5.22e-80!33;UBERON:0002346!1.62e-76!90;UBERON:0001869!8.82e-76!32;UBERON:0007023!2.89e-68!115;UBERON:0002619!2.37e-58!22;UBERON:0003056!1.82e-55!61;UBERON:0001950!2.78e-51!20;UBERON:0000956!4.55e-51!25;UBERON:0000203!4.55e-51!25;UBERON:0000033!3.99e-48!123;UBERON:0000153!1.69e-45!129;UBERON:0007811!1.69e-45!129;UBERON:0004121!2.38e-42!169;UBERON:0000924!3.61e-41!173;UBERON:0006601!3.61e-41!173;UBERON:0002308!1.77e-35!9;UBERON:0000125!1.77e-35!9;UBERON:0002420!7.52e-35!9;UBERON:0007245!7.52e-35!9;UBERON:0010009!7.52e-35!9;UBERON:0010011!7.52e-35!9;UBERON:0000454!7.52e-35!9;UBERON:0003076!5.38e-30!15;UBERON:0003057!5.38e-30!15;UBERON:0000025!4.69e-29!194;UBERON:0009663!1.29e-27!7;UBERON:0002298!1.07e-24!8;UBERON:0004732!7.89e-24!13;UBERON:0000200!3.55e-23!6;UBERON:0004111!1.39e-21!241;UBERON:0004733!2.80e-20!12;UBERON:0002028!2.80e-20!12;UBERON:0007277!2.80e-20!12;UBERON:0000349!1.14e-19!5;UBERON:0000477!7.05e-18!286;UBERON:0001871!2.59e-17!7;UBERON:0000483!8.58e-17!309;UBERON:0000119!1.54e-16!312;UBERON:0000369!4.11e-16!4;UBERON:0002435!4.11e-16!4;UBERON:0000204!4.11e-16!4;UBERON:0010082!4.11e-16!4;UBERON:0000064!2.10e-15!219;UBERON:0000475!1.07e-13!365;UBERON:0001872!1.41e-13!5;UBERON:0006331!1.55e-13!3;UBERON:0002021!1.89e-13!5;UBERON:0000988!2.65e-13!3;UBERON:0001896!6.75e-13!3;UBERON:0005290!6.75e-13!3;UBERON:0010096!6.75e-13!3;UBERON:0005383!1.45e-12!3;UBERON:0005382!1.45e-12!3;UBERON:0002771!1.83e-12!3;UBERON:0002240!2.24e-12!3;UBERON:0002680!5.93e-11!9;UBERON:0001895!5.93e-11!9;UBERON:0010092!5.93e-11!9;UBERON:0005162!6.63e-10!2;UBERON:0000122!6.63e-10!2;UBERON:0001897!8.19e-10!2;UBERON:0000062!1.11e-09!511;UBERON:0002148!1.36e-09!2;UBERON:0009662!1.36e-09!2;UBERON:0001875!2.53e-09!2;UBERON:0006514!2.53e-09!2;UBERON:0001873!3.23e-09!2;UBERON:0010122!3.23e-09!2;UBERON:0001876!5.93e-09!2;UBERON:0001954!6.96e-09!2;UBERON:0003022!6.96e-09!2;UBERON:0002421!6.96e-09!2;UBERON:0002600!6.96e-09!2;UBERON:0001870!9.95e-09!2;UBERON:0002360!2.96e-08!2;UBERON:0000094!2.96e-08!2;UBERON:0007645!2.96e-08!2;UBERON:0005174!1.33e-07!5;UBERON:0001137!1.33e-07!5 | 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| ||
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|short_description=p4@TMEM235 | |short_description=p4@TMEM235 | ||
}} | }} |
Latest revision as of 20:40, 17 September 2015
Short description: | p4@TMEM235 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMEM235_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -140bp_to_ENST00000374946, ENST00000421688, ENST00000543327, NM_001204210, NM_001204211, NM_001204212, uc010dhm.1_5end |
EntrezGene: | TMEM235 |
HGNC: | 27563 |
UniProt: | A6NFC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data