FFCP PHASE1:Hg19::chr7:71802254..71802267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83698 | |EntrezGene=83698 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13248 | |HGNC=13248 | ||
|TSSclassifier=strong | |||
|UniProt=A4D1Z1,Q9BXU9 | |UniProt=A4D1Z1,Q9BXU9 | ||
|association_with_transcript=-46bp_to_NM_001017440,uc003twa.3_5end | |association_with_transcript=-46bp_to_NM_001017440,uc003twa.3_5end | ||
|cluster_id=chr7:71802254..71802267,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_4_at_CALN1_5end | |description=CAGE_peak_4_at_CALN1_5end | ||
|id=chr7:71802254..71802267,- | |id=chr7:71802254..71802267,- | ||
|ontology_enrichment_celltype=CL:0002322!3.94e-10!5 | |ontology_enrichment_celltype=CL:0002322!3.94e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002032;4.51e-07;1!CL:0000557;4.51e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.31e-09;82!UBERON:0006241;1.79e-08;3!UBERON:0003057;1.79e-08;3!UBERON:0005425;3.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.24e-56!57;UBERON:0005068!2.24e-56!57;UBERON:0006241!2.24e-56!57;UBERON:0007135!2.24e-56!57;UBERON:0000073!1.08e-55!94;UBERON:0001016!1.08e-55!94;UBERON:0001017!1.88e-53!82;UBERON:0005743!1.32e-52!86;UBERON:0002616!3.38e-45!59;UBERON:0001893!2.78e-43!34;UBERON:0002020!3.09e-43!34;UBERON:0003528!3.09e-43!34;UBERON:0002791!2.49e-41!33;UBERON:0000955!3.52e-41!69;UBERON:0006238!3.52e-41!69;UBERON:0002780!1.34e-40!41;UBERON:0001890!1.34e-40!41;UBERON:0006240!1.34e-40!41;UBERON:0003075!1.36e-39!86;UBERON:0007284!1.36e-39!86;UBERON:0003080!1.91e-39!42;UBERON:0001869!2.58e-39!32;UBERON:0002346!2.74e-37!90;UBERON:0007023!1.44e-34!115;UBERON:0002619!5.70e-33!22;UBERON:0001950!1.61e-28!20;UBERON:0000956!1.64e-28!25;UBERON:0000203!1.64e-28!25;UBERON:0004121!2.87e-27!169;UBERON:0003056!1.84e-26!61;UBERON:0000924!2.64e-26!173;UBERON:0006601!2.64e-26!173;UBERON:0000153!8.38e-25!129;UBERON:0007811!8.38e-25!129;UBERON:0000033!3.97e-22!123;UBERON:0003076!1.50e-17!15;UBERON:0003057!1.50e-17!15;UBERON:0002420!6.59e-17!9;UBERON:0007245!6.59e-17!9;UBERON:0010009!6.59e-17!9;UBERON:0010011!6.59e-17!9;UBERON:0000454!6.59e-17!9;UBERON:0002308!1.89e-16!9;UBERON:0000125!1.89e-16!9;UBERON:0002298!5.20e-14!8;UBERON:0001871!8.05e-14!7;UBERON:0004732!9.15e-14!13;UBERON:0000349!3.17e-13!5;UBERON:0000025!1.84e-12!194;UBERON:0009663!1.90e-12!7;UBERON:0004733!9.17e-12!12;UBERON:0002028!9.17e-12!12;UBERON:0007277!9.17e-12!12;UBERON:0000200!2.84e-09!6;UBERON:0004111!1.97e-08!241;UBERON:0000064!2.10e-08!219;UBERON:0002240!3.56e-08!3;UBERON:0000988!5.32e-08!3;UBERON:0001872!6.61e-08!5;UBERON:0001896!6.88e-08!3;UBERON:0005290!6.88e-08!3;UBERON:0010096!6.88e-08!3;UBERON:0006331!1.04e-07!3;UBERON:0002021!1.17e-07!5;UBERON:0000477!1.43e-07!286;UBERON:0002771!3.93e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.22e-32;53!UBERON:0002616;1.22e-32;53!UBERON:0003528;1.49e-32;34!UBERON:0002020;1.49e-32;34!UBERON:0001893;4.63e-32;34!UBERON:0002791;1.32e-31;32!UBERON:0001869;1.45e-31;32!UBERON:0000349;7.60e-29;5!UBERON:0002780;1.48e-28;41!UBERON:0001890;1.48e-28;41!UBERON:0002619;1.73e-27;22!UBERON:0000956;4.49e-24;25!UBERON:0000203;4.49e-24;25!UBERON:0002420;1.84e-22;9!UBERON:0007245;1.84e-22;9!UBERON:0010009;1.84e-22;9!UBERON:0010011;1.84e-22;9!UBERON:0000454;1.84e-22;9!UBERON:0001016;6.63e-21;83!UBERON:0001950;4.94e-20;20!UBERON:0000955;2.09e-19;68!UBERON:0001017;7.17e-16;75!UBERON:0000125;1.34e-15;9!UBERON:0002308;1.34e-15;9!UBERON:0002298;4.52e-15;6!UBERON:0004732;5.81e-15;13!UBERON:0000369;8.77e-14;4!UBERON:0002435;8.77e-14;4!UBERON:0000204;8.77e-14;4!UBERON:0009663;2.48e-13;7!UBERON:0002370;4.39e-13;2!UBERON:0005058;4.39e-13;2!UBERON:0009113;4.39e-13;2!UBERON:0001871;5.81e-13;6!UBERON:0001954;9.37e-13;2!UBERON:0003022;9.37e-13;2!UBERON:0002421;9.37e-13;2!UBERON:0002600;9.37e-13;2!UBERON:0001876;1.62e-12;2!UBERON:0003714;2.87e-12;2!UBERON:0005162;2.87e-12;2!UBERON:0000122;2.87e-12;2!UBERON:0004733;2.29e-11;12!UBERON:0002028;2.29e-11;12!UBERON:0005383;7.63e-09;3!UBERON:0005382;7.63e-09;3!UBERON:0007023;1.53e-08;114!UBERON:0002240;1.79e-08;3!UBERON:0005174;1.79e-08;3!UBERON:0001137;1.79e-08;3!UBERON:0000988;2.24e-08;3!UBERON:0001896;2.24e-08;3!UBERON:0005290;2.24e-08;3!UBERON:0011216;2.69e-07;132!UBERON:0001874;3.26e-07;1!UBERON:0000941;3.26e-07;1!UBERON:0001785;3.26e-07;1!UBERON:0002464;3.26e-07;1!UBERON:0004904;3.26e-07;1!UBERON:0001021;3.26e-07;1!UBERON:0001882;4.51e-07;1!UBERON:0005403;4.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.28e-51,56;UBERON:0005068,2.28e-51,56;UBERON:0006241,2.28e-51,56;UBERON:0007135,2.28e-51,56;UBERON:0001016,2.03e-45,89;UBERON:0000073,2.57e-45,53;UBERON:0002616,2.57e-45,53;UBERON:0001017,1.40e-43,81;UBERON:0003528,1.11e-37,34;UBERON:0002020,1.11e-37,34;UBERON:0001893,1.17e-37,34;UBERON:0000955,1.98e-37,68;UBERON:0006238,1.98e-37,68;UBERON:0003075,6.56e-37,82;UBERON:0007284,6.56e-37,82;UBERON:0002791,2.93e-35,32;UBERON:0001869,2.93e-35,32;UBERON:0002346,5.68e-35,86;UBERON:0002780,6.71e-35,41;UBERON:0001890,6.71e-35,41;UBERON:0003080,6.71e-35,41;UBERON:0006240,6.71e-35,41;UBERON:0000349,7.85e-29,5;UBERON:0010371,4.47e-28,104;UBERON:0002619,1.93e-27,22;UBERON:0003056,1.89e-25,61;UBERON:0007023,2.58e-25,114;UBERON:0010314,4.13e-25,132;UBERON:0000956,4.94e-24,25;UBERON:0000203,4.94e-24,25;UBERON:0002420,1.71e-22,9;UBERON:0007245,1.71e-22,9;UBERON:0010009,1.71e-22,9;UBERON:0010011,1.71e-22,9;UBERON:0000454,1.71e-22,9;UBERON:0004121,2.78e-21,171;UBERON:0000924,2.78e-21,171;UBERON:0006601,2.78e-21,171;UBERON:0011216,6.78e-21,223;UBERON:0001950,5.43e-20,20;UBERON:0003076,2.68e-17,15;UBERON:0003057,2.68e-17,15;UBERON:0000125,1.24e-15,9;UBERON:0002308,1.24e-15,9;UBERON:0002298,5.85e-15,6;UBERON:0004732,5.89e-15,13;UBERON:0000369,8.24e-14,4;UBERON:0002435,8.24e-14,4;UBERON:0000204,8.24e-14,4;UBERON:0010082,8.24e-14,4;UBERON:0009663,2.29e-13,7;UBERON:0001871,5.73e-13,6;UBERON:0000025,8.54e-13,192;UBERON:0001954,9.39e-13,2;UBERON:0003022,9.39e-13,2;UBERON:0002421,9.39e-13,2;UBERON:0002600,9.39e-13,2;UBERON:0001876,1.67e-12,2;UBERON:0003714,2.10e-12,2;UBERON:0005162,3.31e-12,2;UBERON:0000122,3.31e-12,2;UBERON:0004733,2.29e-11,12;UBERON:0002028,2.29e-11,12;UBERON:0007277,2.29e-11,12;UBERON:0004111,3.29e-09,240;UBERON:0005383,7.21e-09,3;UBERON:0005382,7.21e-09,3;UBERON:0000483,1.24e-08,306;UBERON:0000119,1.71e-08,309;UBERON:0002240,1.86e-08,3;UBERON:0005174,1.86e-08,3;UBERON:0001137,1.86e-08,3;UBERON:0000988,2.33e-08,3;UBERON:0001896,2.80e-08,3;UBERON:0005290,2.80e-08,3;UBERON:0010096,2.80e-08,3;UBERON:0001874,2.99e-07,1;UBERON:0000941,3.36e-07,1;UBERON:0001785,3.36e-07,1;UBERON:0002464,3.36e-07,1;UBERON:0004904,3.36e-07,1;UBERON:0001021,3.36e-07,1;UBERON:0003902,3.36e-07,1;UBERON:0005425,3.36e-07,1;UBERON:0001882,4.51e-07,1;UBERON:0005403,4.51e-07,1;UBERON:0002370,6.03e-07,4;UBERON:0005058,6.03e-07,4;UBERON:0009113,6.03e-07,4;UBERON:0003295,6.03e-07,4;UBERON:0005562,6.03e-07,4;UBERON:0002022,6.38e-07,1;UBERON:0003112,7.57e-07,1;UBERON:0011158,7.57e-07,1;UBERON:0003128,7.57e-07,1;UBERON:0001703,7.57e-07,1;UBERON:0002241,7.57e-07,1;UBERON:0004761,7.57e-07,1;UBERON:0009617,7.57e-07,1;UBERON:0002363,8.49e-07,1;UBERON:0007645,8.49e-07,1;UBERON:0007647,8.49e-07,1;UBERON:0010115,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,0,0,0.280797178113459,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,4.22008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,13.9729658600836,0,0,0,0,0,0,0,0,0,0,6.75340056302285,0,0.995213339381022,1.77328571372128,0.87754158861589,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,1.40558667435203,0,0,0,0,0,1.22429104652196,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.36905378891993,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,4.77137813885582,4.08610218334727,0.160753148465019,0.825236619583403,0.415440338029185,0,0,1.94398581305679,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.3755727921195,0.573409195690071,1.22021956690538,3.10482014706917,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0.107824811396682,0,0,0,0,0,1.67593475391973,0,0,0.80057074828547,0,0,3.3399197050159,0,0.478901577171454,0.205116364240755,4.53729053199093,1.10651603942749,1.61475645631851,4.28308260777463,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.87798860003913,0,0.620060389503552,0.697573912132975,8.75159694429151,0,0,0,0,0,0,0,0,0,0,0,3.26254718288792,1.05236437700559,0,0,0,4.71346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,2.74831853960923,0.891139200981258,2.113278637917,0,0,0.322289439867886,0,0,0,0,0,0,0.860037498908708,0,1.49581278420012,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0.714193294391221,11.1738814016291,17.8154430029112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957526850661834,0,0,0.280797178113459,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,4.22008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,13.9729658600836,0,0,0,0,0,0,0,0,0,0,6.75340056302285,0,0.995213339381022,1.77328571372128,0.87754158861589,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28062152663286,0,1.40558667435203,0,0,0,0,0,1.22429104652196,1.45329133145522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.886351143382302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.36905378891993,3.83239764200917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,4.77137813885582,4.08610218334727,0.160753148465019,0.825236619583403,0.415440338029185,0,0,1.94398581305679,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.775697738169303,1.3223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.3755727921195,0.573409195690071,1.22021956690538,3.10482014706917,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0.107824811396682,0,0,0,0,0,1.67593475391973,0,0,0.80057074828547,0,0,3.3399197050159,0,0.478901577171454,0.205116364240755,4.53729053199093,1.10651603942749,1.61475645631851,4.28308260777463,0,0,0,0.115525666150338,0,0,0,0,0.20170506870352,0,0,0,0,0.87798860003913,0,0.620060389503552,0.697573912132975,8.75159694429151,0,0,0,0,0,0,0,0,0,0,0,3.26254718288792,1.05236437700559,0,0,0,4.71346769748006,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,2.74831853960923,0.891139200981258,2.113278637917,0,0,0.322289439867886,0,0,0,0,0,0,0.860037498908708,0,1.49581278420012,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827463966895162,0,0.714193294391221,11.1738814016291,17.8154430029112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | ||
|short_description=p4@CALN1 | |short_description=p4@CALN1 | ||
}} | }} |
Latest revision as of 08:47, 19 September 2015
Short description: | p4@CALN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CALN1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -46bp_to_NM_001017440, uc003twa.3_5end |
EntrezGene: | CALN1 |
HGNC: | 13248 |
UniProt: | A4D1Z1Q9BXU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data